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MG592452.1__AUR85537.1__NVP1076O_32__00032
Bact-VirMG592452.1__AUR85537.1__NVP1076O_32__00032
Identity
- Accession:
- MG592452 ↗
- Kingdom:
- phage
Quality
49.3
mean pLDDT
Taxonomy
TaxID: 2070720
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-98
Domain cluster:
rep: MT366760.1__QJT70983.1__GR7B_00185__00185__D97-159
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s7mA03 | 2.20.25.140 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.69 | 23.0 | 3.62e-01 | 91.7% | 82.1% |
| 1bf5A04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 37.0 | 3.35e-01 | 90.5% | 43.4% |
| 2crhA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 37.0 | 3.55e-01 | 83.3% | 51.0% |
| 2cs0A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 39.0 | 3.76e-01 | 89.3% | 63.2% |
| 1g4fA00 | 2.10.70.10 | Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 | 0.56 | 36.0 | 3.60e-01 | 88.1% | 62.8% |
| 1h9oA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.56 | 38.0 | 3.56e-01 | 89.3% | 55.6% |
| 3ilvA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.53 | 46.0 | 3.37e-01 | 100.0% | 39.9% |
| 1u6eA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.53 | 46.0 | 3.83e-01 | 97.6% | 57.3% |
| 8c5iA01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.53 | 46.0 | 3.20e-01 | 100.0% | 37.5% |
| 2pmeA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 46.0 | 3.14e-01 | 100.0% | 73.0% |
| 2x5nA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.52 | 45.0 | 3.60e-01 | 100.0% | 59.2% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 35.0 | 3.39e-01 | 97.6% | 62.8% |
| 1y4uB01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 42.0 | 3.39e-01 | 97.6% | 58.2% |
| 4as2A02 | 1.20.1440.310 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.51 | 41.0 | 3.90e-01 | 89.3% | 92.2% |
| 4hlbA00 | 3.30.70.2960 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 3.95e-01 | 88.1% | 96.8% |
| 5b1rA00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.51 | 43.0 | 3.94e-01 | 95.2% | 77.6% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.51 | 40.0 | 3.74e-01 | 100.0% | 67.6% |
| 8g3lE01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 41.0 | 3.34e-01 | 92.9% | 79.2% |
| 3dlaB01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.50 | 43.0 | 2.99e-01 | 100.0% | 31.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3937854 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.69 | 42.0 | 3.94e-01 | 83.3% | 50.0% |
| 3623169 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.68 | 41.0 | 3.80e-01 | 83.3% | 47.6% |
| 3579037 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.67 | 40.0 | 3.72e-01 | 83.3% | 46.7% |
| 3240191 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.67 | 41.0 | 3.63e-01 | 95.2% | 41.6% |
| 3938083 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 40.0 | 3.84e-01 | 83.3% | 52.6% |
| 3930641 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.64 | 39.0 | 3.69e-01 | 83.3% | 48.6% |
| 3619626 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.64 | 38.0 | 3.70e-01 | 98.8% | 51.6% |
| 3625308 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 39.0 | 3.47e-01 | 83.3% | 41.6% |
| 3583928 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 38.0 | 3.58e-01 | 84.5% | 47.6% |
| 3401089 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 45.0 | 3.96e-01 | 81.0% | 50.8% |
| 3941356 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.61 | 38.0 | 3.37e-01 | 84.5% | 42.5% |
| 3509348 | 214.1.1.15 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063, DUF7145 | 0.59 | 38.0 | 2.60e-01 | 78.6% | 18.0% |
| 3293552 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.57 | 49.0 | 4.07e-01 | 96.4% | 81.0% |
| 4289808 | 101.17.1.0 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins | 0.56 | 30.0 | 3.27e-01 | 79.8% | 61.4% |
| 4544637 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.56 | 38.0 | 3.68e-01 | 71.4% | 62.4% |
| 3356778 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.56 | 45.0 | 3.78e-01 | 91.7% | 77.4% |
| 3427017 | 2485.1.1.45 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_8 | 0.55 | 40.0 | 3.97e-01 | 97.6% | 74.2% |
| 3736603 | 7.1.1.4 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › GRASP55_65 | 0.54 | 39.0 | 3.79e-01 | 76.2% | 95.8% |
| 5080764 | 7518.1.1.0 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like | 0.54 | 47.0 | 4.19e-01 | 97.6% | 85.8% |
| 5079388 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 42.0 | 3.18e-01 | 100.0% | 36.3% |
| 3838290 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.53 | 32.0 | 3.50e-01 | 85.7% | 73.8% |
| 1260906 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.53 | 46.0 | 3.37e-01 | 100.0% | 40.1% |
| 3386772 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.53 | 40.0 | 2.94e-01 | 100.0% | 27.1% |
| 1174443 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.53 | 45.0 | 3.10e-01 | 100.0% | 30.4% |
| 4003762 | 2492.1.1.36 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › ODR4-like | 0.53 | 45.0 | 3.71e-01 | 100.0% | 91.5% |
| 5010105 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.52 | 38.0 | 3.43e-01 | 100.0% | 53.6% |
| 5045133 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.52 | 46.0 | 3.95e-01 | 100.0% | 94.1% |
| 4994401 | 7518.1.1.1 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › PK_C | 0.52 | 44.0 | 3.88e-01 | 95.2% | 78.4% |
| 5074348 | 2492.1.1.18 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › Prok-JAB | 0.52 | 46.0 | 3.90e-01 | 100.0% | 93.6% |
D2
high
residues 138-214