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MG592456.1__AUR85763.1__NVP1081O_028__00028
Bact-VirMG592456.1__AUR85763.1__NVP1081O_028__00028
Identity
- Accession:
- MG592456 ↗
- Kingdom:
- phage
Quality
73.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Schizotequatrovirus›
Vibrio_phage_1.081.O._10N.286.52.C2
TaxID: 2070722
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 199-313
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qexA02 | 2.60.120.640 | Mainly Beta › Sandwich › Jelly Rolls › gp9 | 0.79 | 64.0 | 6.70e-01 | 100.0% | 94.2% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 52.0 | 5.76e-01 | 100.0% | 95.5% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 54.0 | 5.93e-01 | 100.0% | 98.9% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 53.0 | 5.77e-01 | 100.0% | 98.9% |
| 6o38A03 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 47.0 | 5.42e-01 | 94.8% | 98.8% |
| 4dnyA00 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.66 | 51.0 | 5.25e-01 | 100.0% | 87.2% |
| 4fchA01 | 2.60.40.3620 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 43.0 | 4.41e-01 | 93.9% | 86.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2581340 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.72 | 52.0 | 5.86e-01 | 100.0% | 97.7% |
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.71 | 54.0 | 5.91e-01 | 100.0% | 97.8% |
| 2581339 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.71 | 53.0 | 5.76e-01 | 100.0% | 94.7% |
| 2581338 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.69 | 53.0 | 5.71e-01 | 100.0% | 96.9% |
| 4562874 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.62 | 56.0 | 4.34e-01 | 100.0% | 71.0% |
| 3289663 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.62 | 56.0 | 4.57e-01 | 100.0% | 81.8% |
| 1220306 | 3597.1.1.1 ↗ | beta sandwiches › Starch specific carbohydrate-binding modules › Starch specific carbohydrate-binding modules › Starch specific carbohydrate-binding modules › SusF_SusE | 0.55 | 43.0 | 4.40e-01 | 93.9% | 85.5% |
| 3806930 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.53 | 40.0 | 4.27e-01 | 100.0% | 91.0% |
| 5071024 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.51 | 44.0 | 4.30e-01 | 93.0% | 96.0% |
| 3419133 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.50 | 38.0 | 3.83e-01 | 79.1% | 82.6% |
D2
high
residues 322-448
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.76 | 49.0 | 5.80e-01 | 100.0% | 93.3% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.73 | 51.0 | 5.92e-01 | 100.0% | 98.9% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.72 | 50.0 | 5.76e-01 | 100.0% | 97.8% |
| 6o38A03 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.71 | 45.0 | 5.39e-01 | 96.1% | 97.6% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 38.0 | 4.10e-01 | 100.0% | 79.2% |
| 1sfpA00 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.53 | 40.0 | 4.17e-01 | 92.1% | 91.0% |
| 7s7rA01 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 39.0 | 3.79e-01 | 78.0% | 97.1% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2581340 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.76 | 49.0 | 5.88e-01 | 100.0% | 96.6% |
| 2581337 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.73 | 51.0 | 5.89e-01 | 100.0% | 97.8% |
| 2581339 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.72 | 49.0 | 5.62e-01 | 100.0% | 93.6% |
| 2581338 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.72 | 50.0 | 5.66e-01 | 100.0% | 94.8% |
| 3904645 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.58 | 42.0 | 4.50e-01 | 92.9% | 90.5% |
| 3485798 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 49.0 | 4.68e-01 | 93.7% | 88.7% |
| 3864315 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.56 | 43.0 | 4.54e-01 | 92.9% | 92.7% |
| 3917546 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 39.0 | 4.43e-01 | 76.4% | 97.9% |
| 5008636 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 30.0 | 3.64e-01 | 97.6% | 83.7% |
| 3244855 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 38.0 | 4.25e-01 | 80.3% | 94.0% |
| 5059643 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 33.0 | 3.83e-01 | 73.2% | 97.5% |
| 3807948 | 3156.1.1.6 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu_bind_like | 0.52 | 38.0 | 4.16e-01 | 79.5% | 94.3% |
| 3569518 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.51 | 37.0 | 3.74e-01 | 92.9% | 75.2% |
D3
medium
residues 980-1050
Domain cluster:
rep: KM359505.1__AIR93407.1__X__00022__D249-337
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v95A02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.57 | 39.0 | 3.23e-01 | 71.8% | 94.6% |
| 2o62A01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 41.0 | 3.45e-01 | 81.7% | 100.0% |
| 2a0aA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 38.0 | 3.12e-01 | 78.9% | 71.8% |
| 3l9rA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.51 | 46.0 | 3.42e-01 | 100.0% | 51.4% |
| 1ealA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 38.0 | 3.16e-01 | 87.3% | 44.1% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3335901 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.62 | 49.0 | 3.38e-01 | 87.3% | 73.5% |
| 3766391 | 77.1.1.2 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › FAM194 | 0.61 | 54.0 | 4.14e-01 | 100.0% | 50.0% |
| 3536554 | 77.1.1.2 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › FAM194 | 0.60 | 53.0 | 4.88e-01 | 100.0% | 82.1% |
| 4230707 | 79.1.1.32 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › RHS_repeat, TEN_YD-shell | 0.58 | 49.0 | 3.24e-01 | 98.6% | 24.4% |