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MG592456.1__AUR85819.1__NVP1081O_084__00084

Bact-Vir

MG592456.1__AUR85819.1__NVP1081O_084__00084

Identity

Accession:
MG592456 ↗
Kingdom:
phage

Quality

57.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Schizotequatrovirus› Vibrio_phage_1.081.O._10N.286.52.C2

TaxID: 2070722

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 240-319
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ap3A00 1.20.120.570 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like 0.74 52.0 3.94e-01 73.8% 55.2%
3am6A00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.70 60.0 4.44e-01 98.8% 53.1%
2kbbA00 1.20.1420.10 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain 0.69 52.0 4.08e-01 81.2% 50.6%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.68 60.0 4.90e-01 100.0% 64.1%
1xioA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.67 57.0 4.29e-01 98.8% 58.1%
1b68A00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.67 50.0 4.26e-01 81.2% 71.0%
1xg2B00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.65 56.0 4.66e-01 100.0% 63.6%
3o10C00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.65 46.0 3.85e-01 73.8% 68.4%
5xfaA04 1.20.1440.230 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain 0.64 55.0 5.44e-01 100.0% 98.8%
3t9oB00 1.20.120.30 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartate receptor, ligand-binding domain 0.63 47.0 4.19e-01 81.2% 69.2%
1kxpD02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.63 44.0 4.36e-01 75.0% 83.0%
6xxvC00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.62 48.0 4.34e-01 83.7% 95.5%
7c4sB01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.62 53.0 3.70e-01 96.2% 80.1%
6fucA02 3.90.1200.10 Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe 0.62 44.0 3.46e-01 76.2% 85.9%
6o7uc01 1.20.120.610 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › lithium bound rotor ring of v- atpase 0.62 56.0 4.21e-01 100.0% 74.2%
4f3vB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.62 53.0 3.65e-01 95.0% 62.1%
4g3aB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 51.0 3.67e-01 93.8% 38.0%
4od4A01 1.10.357.140 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase 0.60 49.0 4.02e-01 91.3% 72.4%
3ug9A02 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.60 49.0 3.64e-01 91.3% 84.9%
2cwyA00 1.10.3450.10 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › TTHA0068-like 0.60 52.0 4.96e-01 97.5% 91.4%
1ysyA00 1.10.8.370 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › nsp7 replicase 0.60 40.0 3.99e-01 82.5% 65.9%
2ebfX02 1.20.140.180 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.60 52.0 4.36e-01 100.0% 79.7%
6fakA02 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.59 41.0 4.11e-01 72.5% 85.2%
2iw3A02 1.20.1390.20 Mainly Alpha › Up-down Bundle › PWI domain › 0.58 51.0 4.97e-01 98.8% 92.2%
3qweA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.57 40.0 2.87e-01 73.8% 78.1%
5k29A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.57 48.0 4.58e-01 100.0% 88.7%
3ajmB02 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.56 48.0 4.17e-01 100.0% 79.7%
1v4aA01 1.10.4050.10 Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE 0.56 41.0 3.73e-01 100.0% 57.8%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.55 34.0 3.10e-01 97.5% 43.8%
3jsbA01 1.20.1440.300 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › RNA-directed RNA polymerase L, helical domain 0.55 47.0 4.69e-01 100.0% 93.8%
2gmyD00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.55 48.0 4.03e-01 100.0% 83.4%
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.55 40.0 3.75e-01 81.2% 91.6%
2h5gB01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.54 46.0 3.22e-01 98.8% 51.3%
6p73A02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.53 42.0 3.41e-01 82.5% 62.2%
3snhA02 1.20.120.1240 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Dynamin, middle domain 0.50 38.0 2.87e-01 83.7% 56.9%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4987192 3684.1.1.0 ↗ alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.74 52.0 4.54e-01 75.0% 70.2%
3217251 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.71 55.0 4.16e-01 83.7% 36.3%
4021737 5001.1.1.6 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Bac_rhodopsin 0.69 59.0 4.18e-01 98.8% 45.6%
3358408 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.68 52.0 4.91e-01 83.7% 77.8%
3178496 109.4.1.1406 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, Vac14_Fab1_bd 0.67 56.0 3.74e-01 92.5% 33.7%
3649540 109.4.1.1406 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, Vac14_Fab1_bd 0.66 56.0 3.70e-01 92.5% 32.0%
4963083 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.64 56.0 4.12e-01 95.0% 69.4%
3958054 633.11.1.0 ↗ alpha bundles › Bromodomain-like › Nqo1C-terminal domain-like › Nqo1C-terminal domain-like 0.64 55.0 5.13e-01 100.0% 81.0%
4055376 633.11.1.1 ↗ alpha bundles › Bromodomain-like › Nqo1C-terminal domain-like › Nqo1C-terminal domain-like › NADH_4Fe-4S 0.64 54.0 5.13e-01 100.0% 84.0%
4975275 5053.1.1.1 ↗ alpha complex topology › Clc chloride channel › Clc chloride channel › Clc chloride channel › Voltage_CLC 0.62 49.0 3.08e-01 85.0% 74.1%
3700350 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 51.0 4.40e-01 90.0% 81.6%
5005724 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.62 55.0 3.96e-01 100.0% 40.4%
3899614 109.4.1.2006 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, PF29896 0.61 50.0 3.60e-01 91.3% 41.6%
3936654 109.4.1.436 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Nipped-B_C 0.61 51.0 3.15e-01 93.8% 18.0%
3675794 109.4.1.1556 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cohesin_HEAT, PDS5 0.60 49.0 3.16e-01 92.5% 24.1%
3836490 601.4.1.70 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › DUF1216 0.59 50.0 4.10e-01 100.0% 61.8%
4542753 2004.1.1.221 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG 0.59 50.0 3.16e-01 98.8% 36.1%
3416261 371.1.1.0 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.59 47.0 4.48e-01 100.0% 73.8%
3252643 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.58 43.0 3.39e-01 81.2% 36.0%
3971032 1051.1.1.1 ↗ alpha superhelices › Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain › Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain › Putative 3-oxoacyl-(acyl-carrier-protein) synthase N-terminal domain › HOASN 0.57 41.0 3.99e-01 76.2% 78.9%
3250091 3948.1.1.0 ↗ alpha bundles › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain › V(D)J recombination-activating protein 1 helical bundle domain 0.55 48.0 3.99e-01 100.0% 62.7%
3827814 109.4.1.408 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT,IBN_N 0.55 46.0 3.32e-01 95.0% 39.2%
3511947 2004.1.1.221 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › P-loop_TraG 0.54 45.0 2.92e-01 97.5% 44.5%
3593576 2011.1.1.17 ↗ a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › DUF2817 0.53 43.0 2.90e-01 93.8% 57.4%
3393832 1147.1.1.1 ↗ alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL 0.53 42.0 3.68e-01 85.0% 99.1%
D2 medium residues 1-45_57-134
PDB
D3 medium residues 135-198
PDB
D4 medium residues 333-391
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2j3vA02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.85 78.0 5.20e-01 100.0% 30.7%
4h03A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.84 77.0 5.18e-01 100.0% 32.7%
1qs1A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.83 75.0 5.12e-01 100.0% 33.0%
5wtzA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.79 71.0 4.77e-01 100.0% 31.9%
2wn5A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.72 63.0 4.40e-01 98.3% 79.9%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 56.0 5.51e-01 94.9% 85.9%
4toiA02 1.10.287.610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.64 43.0 4.63e-01 81.4% 85.4%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 5.24e-01 96.6% 93.7%
1s0pA01 1.25.40.330 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Adenylate cyclase-associated CAP, N-terminal domain 0.60 52.0 3.82e-01 100.0% 94.7%
4gf0A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 45.0 3.68e-01 93.2% 43.4%
4esjA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 49.0 4.35e-01 98.3% 95.6%
2r3bA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.57 43.0 2.79e-01 81.4% 91.3%
2mtqA00 1.20.58.130 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.56 44.0 4.10e-01 91.5% 68.5%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 4.31e-01 86.4% 90.7%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 42.0 4.32e-01 93.2% 92.7%
1sazA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 42.0 3.05e-01 84.7% 32.4%
2no4A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.55 33.0 3.12e-01 72.9% 48.0%
3u3gA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.55 38.0 2.98e-01 74.6% 45.0%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.54 45.0 3.54e-01 93.2% 44.8%
2i2xB01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.53 43.0 3.75e-01 98.3% 74.0%
4h0oA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 45.0 3.26e-01 98.3% 71.3%
2m6uA00 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.51 40.0 3.58e-01 96.6% 61.0%
1x6iB00 1.10.150.250 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Flavinator of succinate dehydrogenase 0.51 40.0 3.64e-01 91.5% 66.7%
4hehA01 1.10.1240.10 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain 0.51 40.0 3.63e-01 88.1% 74.7%
1sg7A00 1.10.1740.70 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › ChaB 0.50 39.0 3.67e-01 100.0% 68.0%
1t72A02 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.50 43.0 3.69e-01 98.3% 72.4%
1psyA01 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.50 37.0 3.23e-01 83.1% 64.0%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4626477 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.89 83.0 5.79e-01 100.0% 37.6%
1893388 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.87 80.0 5.34e-01 100.0% 32.1%
308103 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.86 78.0 5.20e-01 100.0% 30.4%
4157545 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.84 67.0 4.89e-01 86.4% 34.0%
2402651 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.83 73.0 4.96e-01 96.6% 29.5%
3280971 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.73 61.0 4.49e-01 98.3% 35.2%
4603338 101.1.1.31 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.68 59.0 5.55e-01 94.9% 78.6%
149489 101.1.1.95 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PhyR_sigma-like 0.63 53.0 4.82e-01 96.6% 68.8%
3286778 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.63 57.0 5.36e-01 100.0% 85.7%
3971149 101.1.1.42 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.63 54.0 4.87e-01 96.6% 72.5%
3494616 4106.1.1.1 ↗ few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC 0.59 48.0 4.34e-01 96.6% 63.5%
4940197 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 45.0 3.62e-01 91.5% 41.7%
4957951 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.56 42.0 4.14e-01 94.9% 76.9%
3685493 605.2.1.4 ↗ alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 › DUF7785 0.54 48.0 4.27e-01 100.0% 81.2%
3833442 142.1.1.29 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › zf-RVT 0.54 45.0 3.36e-01 94.9% 50.0%
3269617 604.6.1.0 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.54 47.0 3.58e-01 98.3% 98.6%
3478267 3812.1.1.0 ↗ alpha bundles › Type III secretion protein YscE › Type III secretion protein YscE › Type III secretion protein YscE 0.52 45.0 4.19e-01 100.0% 78.7%
5009792 150.5.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.51 43.0 4.22e-01 94.9% 95.4%
5050014 4995.1.1.1 ↗ alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like › B12-binding_2 0.51 41.0 3.78e-01 89.8% 91.3%
3321849 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.50 42.0 3.61e-01 91.5% 64.4%
D5 medium residues 392-524
PDB
Domain cluster: rep: KR063281.1__AKJ72552.1__GMA2_14__00014__D100-243
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6k93A00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.78 59.0 4.77e-01 98.5% 43.5%
4xzjA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.70 67.0 5.59e-01 100.0% 82.9%
1qs1A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.69 60.0 5.16e-01 98.5% 61.4%
4h03A02 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.68 61.0 5.22e-01 98.5% 62.9%
2gwlA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.67 62.0 5.30e-01 99.2% 64.5%
1gzeA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.66 60.0 5.12e-01 100.0% 61.8%
1yqyA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.66 58.0 4.91e-01 99.2% 60.3%
4fk7A00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.65 60.0 5.14e-01 98.5% 64.5%
1ojqA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.64 59.0 5.00e-01 99.2% 64.2%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.64 57.0 4.89e-01 98.5% 62.6%
1zpsA01 3.10.20.810 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase 0.63 32.0 3.81e-01 95.5% 70.5%
5wtzA01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.62 57.0 4.84e-01 100.0% 98.6%
2wn5A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.61 53.0 4.70e-01 100.0% 64.9%
2d3aA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.58 33.0 3.73e-01 100.0% 72.3%
1kl9A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 32.0 4.08e-01 89.5% 97.3%
1y14D02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 34.0 4.04e-01 81.2% 96.6%
2c35B02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 35.0 4.00e-01 82.7% 95.6%
2khjA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 33.0 3.85e-01 88.7% 93.3%
ECOD (41)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2410012 237.1.1.2 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART 0.85 61.0 5.34e-01 98.5% 52.4%
4424922 237.1.1.34 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART, ADPrib_exo_Tox 0.83 61.0 4.97e-01 100.0% 43.9%
4157545 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.82 63.0 6.00e-01 97.7% 69.3%
2547952 237.1.1.34 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART, ADPrib_exo_Tox 0.78 59.0 4.77e-01 98.5% 43.5%
4952387 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.77 58.0 6.10e-01 100.0% 85.7%
3886084 237.1.1.2 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART 0.76 59.0 4.90e-01 100.0% 48.0%
3612144 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.73 64.0 4.60e-01 100.0% 34.6%
3714758 237.1.1.0 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation 0.72 64.0 5.13e-01 100.0% 51.0%
1687631 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.70 67.0 5.50e-01 100.0% 79.2%
7440 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.69 60.0 5.16e-01 98.5% 61.4%
157262 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.67 61.0 5.16e-01 100.0% 61.5%
4294371 237.1.1.14 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › Anthrax-tox_M 0.66 58.0 4.41e-01 99.2% 42.8%
3280971 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.65 61.0 5.68e-01 98.5% 96.2%
2387820 237.1.1.22 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › SidE_mART 0.65 60.0 4.46e-01 99.2% 45.4%
7442 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.64 59.0 5.00e-01 99.2% 64.2%
4965098 2.1.1.372 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF7513 0.63 33.0 4.03e-01 90.2% 78.8%
2034328 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.61 57.0 4.81e-01 99.2% 98.6%
3617002 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 36.0 4.45e-01 91.0% 97.5%
308110 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.60 56.0 4.67e-01 99.2% 100.0%
3226474 2.1.1.253 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 0.60 34.0 4.35e-01 87.2% 98.7%
2770556 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.59 54.0 4.57e-01 98.5% 98.1%
2869198 239.4.1.1 ↗ beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.58 33.0 3.70e-01 100.0% 71.6%
5016260 56.2.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT 0.58 24.0 3.55e-01 91.7% 86.4%
4952526 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.57 34.0 3.91e-01 89.5% 83.3%
2756306 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.55 37.0 4.11e-01 88.7% 88.3%
4364052 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 27.0 3.55e-01 82.7% 87.1%
3195732 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.55 33.0 4.09e-01 89.5% 100.0%
3508632 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 31.0 3.78e-01 83.5% 94.7%
4453243 2.1.1.219 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 0.54 31.0 3.69e-01 82.7% 85.9%
3485637 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 34.0 4.08e-01 86.5% 100.0%
3181250 2.1.1.116 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 0.53 35.0 3.63e-01 90.2% 71.2%
3498011 2.1.1.116 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 0.53 35.0 3.80e-01 90.2% 82.9%
5045092 2.1.1.364 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110 0.52 37.0 4.11e-01 89.5% 92.4%
3253114 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.52 33.0 3.94e-01 90.2% 100.0%
3168207 2.1.1.7 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.52 33.0 3.94e-01 89.5% 100.0%
3209511 2.1.1.219 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 0.52 31.0 3.60e-01 83.5% 83.2%
3744260 2.1.1.177 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 0.51 32.0 3.81e-01 87.2% 96.5%
4124147 2.1.1.116 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 0.51 34.0 3.67e-01 90.2% 80.9%
4030529 2.1.1.107 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 0.51 34.0 3.92e-01 89.5% 94.7%
3191843 2.1.1.219 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 0.51 32.0 3.72e-01 84.2% 89.5%
3244941 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 33.0 3.80e-01 86.5% 96.7%