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MG592456.1__AUR85910.1__NVP1081O_175__00175

Bact-Vir

MG592456.1__AUR85910.1__NVP1081O_175__00175

Identity

Accession:
MG592456 ↗
Kingdom:
phage

Quality

80.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Schizotequatrovirus› Vibrio_phage_1.081.O._10N.286.52.C2

TaxID: 2070722

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 41-122
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4l9cA00 3.40.1000.30 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › 0.78 43.0 3.41e-01 100.0% 30.0%
2af5A02 3.90.930.1 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.72 38.0 3.18e-01 100.0% 30.4%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.70 40.0 3.36e-01 100.0% 33.1%
2it1A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 40.0 4.51e-01 79.3% 82.0%
2c9oB02 2.40.50.360 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain 0.64 50.0 4.48e-01 90.2% 60.2%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.62 39.0 3.62e-01 97.6% 50.0%
1fr3A00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.61 42.0 4.53e-01 80.5% 88.1%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.60 36.0 3.85e-01 91.5% 69.0%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 42.0 4.57e-01 85.4% 95.3%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 47.0 4.56e-01 85.4% 81.5%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 47.0 4.31e-01 86.6% 74.3%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 42.0 4.63e-01 89.0% 100.0%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 49.0 3.53e-01 95.1% 47.5%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.58 45.0 4.43e-01 85.4% 82.4%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 41.0 3.56e-01 97.6% 46.6%
5zg8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 44.0 4.16e-01 85.4% 78.4%
2eigA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.60e-01 100.0% 56.1%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 48.0 3.57e-01 100.0% 57.6%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 40.0 3.51e-01 98.8% 48.8%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 39.0 3.36e-01 97.6% 45.5%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 43.0 3.57e-01 87.8% 77.4%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 44.0 4.27e-01 87.8% 80.0%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 44.0 3.67e-01 87.8% 80.1%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 43.0 3.63e-01 86.6% 57.1%
3esiA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.54 47.0 4.16e-01 100.0% 82.3%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 42.0 3.97e-01 86.6% 77.1%
5z5dA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 47.0 3.61e-01 100.0% 49.2%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 43.0 3.94e-01 90.2% 87.4%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 43.0 3.97e-01 90.2% 95.3%
1dhkB00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.55e-01 100.0% 48.7%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 45.0 3.59e-01 98.8% 50.0%
3holA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 47.0 3.74e-01 100.0% 49.4%
4gnxB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 3.70e-01 89.0% 82.8%
4l5rC02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 4.02e-01 86.6% 84.3%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 41.0 3.27e-01 90.2% 73.7%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.50 42.0 3.46e-01 93.9% 76.8%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3925021 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.69 39.0 3.33e-01 100.0% 33.3%
3606318 897.1.1.0 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 0.69 46.0 3.34e-01 100.0% 25.5%
3712989 897.1.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 0.68 44.0 3.28e-01 100.0% 26.2%
3867672 2.1.1.22 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.66 41.0 4.42e-01 78.0% 75.0%
4934734 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.63 44.0 3.76e-01 81.7% 44.8%
3679968 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 55.0 4.15e-01 100.0% 50.5%
3212469 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.61 54.0 4.64e-01 97.6% 85.4%
4382135 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.61 40.0 3.66e-01 80.5% 50.0%
4250239 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.61 45.0 4.88e-01 87.8% 98.5%
1349153 5.1.11.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.61 42.0 2.59e-01 100.0% 12.2%
3969312 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.61 42.0 4.50e-01 80.5% 84.3%
3280978 2.4.1.1 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.61 42.0 4.49e-01 80.5% 84.3%
3394892 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.60 55.0 4.03e-01 100.0% 48.1%
4062751 2.1.1.13 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a 0.60 42.0 4.67e-01 86.6% 100.0%
3837684 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.59 52.0 3.75e-01 100.0% 54.6%
5012551 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 43.0 4.43e-01 85.4% 82.5%
5064436 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 48.0 4.52e-01 90.2% 97.0%
3687946 511.1.1.0 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain 0.58 52.0 4.12e-01 100.0% 68.8%
4055338 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.58 51.0 4.30e-01 100.0% 80.0%
4050524 2.1.1.10 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.58 42.0 4.60e-01 87.8% 98.5%
5076505 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 47.0 3.94e-01 89.0% 75.7%
4315057 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 47.0 3.93e-01 89.0% 82.9%
4550958 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.57 44.0 3.99e-01 82.9% 82.3%
4990934 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.57 47.0 3.97e-01 89.0% 74.1%
4233469 2.1.1.24 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.57 47.0 4.12e-01 91.5% 76.0%
4114695 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.57 49.0 3.48e-01 98.8% 51.6%
3792756 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 41.0 4.37e-01 84.1% 88.6%
3485287 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.57 50.0 3.73e-01 97.6% 45.4%
3511262 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 45.0 4.47e-01 86.6% 98.8%
4047281 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.57 44.0 4.09e-01 82.9% 79.0%
4153967 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.57 45.0 4.04e-01 85.4% 83.2%
5077962 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.56 44.0 3.84e-01 84.1% 84.8%
3618947 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 42.0 3.45e-01 87.8% 42.6%
4985184 2.1.1.24 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.56 44.0 4.37e-01 86.6% 82.4%
5027798 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.56 44.0 4.44e-01 84.1% 100.0%
3795930 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 40.0 3.36e-01 97.6% 43.9%
5060970 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.56 45.0 4.01e-01 87.8% 68.3%
4886517 2.1.1.24 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.56 44.0 3.89e-01 87.8% 57.6%
4156571 2.1.1.52 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Stn1 0.56 45.0 3.66e-01 87.8% 65.8%
4197641 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 43.0 3.92e-01 82.9% 86.4%
4493460 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 43.0 3.94e-01 82.9% 81.8%
5017464 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 44.0 4.16e-01 86.6% 85.0%
4944052 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 44.0 4.22e-01 86.6% 81.1%
3719143 227.1.1.0 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.55 47.0 4.07e-01 97.6% 93.3%
3386571 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 41.0 3.96e-01 78.0% 86.2%
1563554 10.1.1.53 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › G7C_C 0.55 49.0 3.75e-01 100.0% 51.0%
4497198 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 44.0 3.57e-01 86.6% 51.6%
4349584 2.1.1.127 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.55 44.0 3.84e-01 86.6% 60.0%
4179160 2.1.1.24 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.55 42.0 3.64e-01 82.9% 65.4%
1102425 2.1.1.22 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.55 43.0 4.20e-01 86.6% 83.5%
3840290 2.1.1.22 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › HIN 0.55 43.0 4.09e-01 86.6% 75.8%
5026951 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.55 43.0 3.73e-01 84.1% 76.8%
4395096 2.1.1.24 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.55 42.0 4.33e-01 82.9% 100.0%
3821150 10.1.1.2 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB 0.55 47.0 3.48e-01 100.0% 58.7%
4936924 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 43.0 4.00e-01 86.6% 82.9%
4478612 2.4.1.0 ↗ beta barrels › OB-fold › MOP-like › MOP-like 0.55 41.0 3.63e-01 80.5% 66.7%
4114579 2.1.1.24 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CcmE 0.54 41.0 4.11e-01 82.9% 80.0%
5012552 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 45.0 4.26e-01 91.5% 96.0%
4596967 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 47.0 3.46e-01 100.0% 55.4%
5043255 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 41.0 4.22e-01 87.8% 86.3%
4506585 222.1.1.12 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH 0.54 47.0 3.89e-01 100.0% 90.3%
3278314 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 39.0 3.69e-01 76.8% 66.0%
5017478 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.54 40.0 4.01e-01 79.3% 91.8%
4936449 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 41.0 4.34e-01 86.6% 100.0%
4195832 9.1.1.24 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_7 0.54 38.0 3.34e-01 98.8% 47.7%
818 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.53 37.0 3.25e-01 97.6% 46.6%
4361334 2.4.1.3 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK 0.53 43.0 3.82e-01 91.5% 99.2%
3947186 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.52 42.0 3.71e-01 87.8% 100.0%
4027685 2.1.1.3 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSD 0.52 41.0 4.18e-01 90.2% 91.3%
4940152 2.4.1.2 ↗ beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.51 39.0 3.54e-01 81.7% 74.8%
2491351 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.51 43.0 3.17e-01 98.8% 44.0%
3474422 2.1.1.15 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.50 39.0 3.41e-01 89.0% 75.7%