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MG592456.1__AUR85920.1__NVP1081O_185__00185
Bact-VirMG592456.1__AUR85920.1__NVP1081O_185__00185
Identity
- Accession:
- MG592456 ↗
- Kingdom:
- phage
Quality
94.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Schizotequatrovirus›
Vibrio_phage_1.081.O._10N.286.52.C2
TaxID: 2070722
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-90
Domain cluster:
rep: NC_054972.1__YP_010079394.1__KMC60_gp23__00023__D49-112
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4exrA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 41.0 | 4.30e-01 | 84.6% | 69.0% |
| 1uurA04 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 46.0 | 3.87e-01 | 73.1% | 57.1% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 38.0 | 4.22e-01 | 89.7% | 82.5% |
| 2jhnA01 | 3.30.310.20 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › DNA-3-methyladenine glycosylase AlkA, N-terminal domain | 0.59 | 38.0 | 3.40e-01 | 96.2% | 46.0% |
| 4bgjA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.58 | 32.0 | 2.82e-01 | 87.2% | 36.4% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 36.0 | 3.91e-01 | 92.3% | 80.0% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.56 | 43.0 | 3.58e-01 | 82.1% | 73.5% |
| 2xklA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 39.0 | 3.26e-01 | 78.2% | 54.4% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 34.0 | 3.20e-01 | 78.2% | 52.0% |
| 2vr3B02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 40.0 | 3.24e-01 | 80.8% | 99.4% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.53 | 44.0 | 3.59e-01 | 88.5% | 52.9% |
| 2pbfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 47.0 | 3.43e-01 | 100.0% | 63.8% |
| 2shpB03 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 41.0 | 2.96e-01 | 92.3% | 30.9% |
| 5llwA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 38.0 | 3.60e-01 | 78.2% | 100.0% |
| 1uuzB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.51 | 43.0 | 3.67e-01 | 92.3% | 59.4% |
| 3mx7A00 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 39.0 | 3.75e-01 | 82.1% | 96.7% |
| 1vavA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 43.0 | 3.18e-01 | 96.2% | 67.1% |
| 3holA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.51 | 37.0 | 3.67e-01 | 83.3% | 96.6% |
| 4ftxB01 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 38.0 | 3.21e-01 | 79.5% | 80.5% |
| 1xg9A02 | 3.10.25.20 | Alpha Beta › Roll › Methionyl-tRNA Fmet Formyltransferase; Chain A, domain 2 › | 0.51 | 37.0 | 3.96e-01 | 91.0% | 98.4% |
| 6mlyB01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 45.0 | 3.12e-01 | 100.0% | 73.3% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.50 | 45.0 | 3.02e-01 | 100.0% | 49.2% |
| 2yrlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 3.62e-01 | 76.9% | 97.6% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3206625 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.65 | 35.0 | 4.41e-01 | 92.3% | 91.1% |
| 3997937 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.64 | 44.0 | 3.32e-01 | 73.1% | 75.5% |
| 3214386 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.61 | 38.0 | 4.54e-01 | 96.2% | 98.0% |
| 5026576 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.60 | 37.0 | 3.67e-01 | 97.4% | 56.5% |
| 5011673 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.60 | 39.0 | 3.44e-01 | 83.3% | 45.2% |
| 3290541 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.59 | 39.0 | 4.28e-01 | 85.9% | 81.5% |
| 2418839 | 12.6.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M | 0.58 | 40.0 | 3.51e-01 | 94.9% | 47.1% |
| 3449739 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.56 | 44.0 | 2.84e-01 | 87.2% | 37.7% |
| 3997324 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.54 | 41.0 | 3.34e-01 | 83.3% | 89.4% |
| 4459946 | 223.1.1.6 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › dCache_1 | 0.54 | 42.0 | 2.98e-01 | 85.9% | 98.4% |
| 3253183 | 328.8.1.1 ↗ | a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 | 0.54 | 39.0 | 2.67e-01 | 89.7% | 22.6% |
| 3231221 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.54 | 40.0 | 2.80e-01 | 79.5% | 35.2% |
| 4929550 | 4.6.1.2 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC | 0.53 | 36.0 | 3.83e-01 | 70.5% | 81.4% |
| 4944850 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.53 | 35.0 | 2.76e-01 | 78.2% | 31.8% |
| 3805876 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.53 | 42.0 | 2.84e-01 | 88.5% | 95.2% |
| 3892544 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.53 | 41.0 | 2.85e-01 | 88.5% | 93.8% |
| 5021185 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 45.0 | 3.46e-01 | 94.9% | 44.0% |
| 3734117 | 2008.1.1.99 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 | 0.52 | 46.0 | 3.26e-01 | 100.0% | 45.3% |
| 5035423 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 41.0 | 4.04e-01 | 87.2% | 84.7% |
| 3636285 | 220.1.1.201 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7493 | 0.52 | 33.0 | 3.61e-01 | 87.2% | 78.5% |
| 3981113 | 283.2.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 | 0.52 | 41.0 | 3.69e-01 | 85.9% | 79.8% |
| 3224914 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.52 | 41.0 | 3.62e-01 | 85.9% | 71.3% |
| 3709251 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.52 | 46.0 | 3.02e-01 | 98.7% | 94.8% |
| 3186334 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.51 | 46.0 | 3.01e-01 | 100.0% | 67.6% |
| 3719842 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.51 | 46.0 | 3.06e-01 | 98.7% | 50.8% |
| 4958666 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.51 | 41.0 | 3.78e-01 | 97.4% | 66.7% |
| 4957795 | 4272.1.1.1 ↗ | a+b two layers › Nqo5-like › Nqo5-like › Nqo5-like › Complex1_30kDa | 0.51 | 36.0 | 3.23e-01 | 80.8% | 52.7% |
| 4204473 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 45.0 | 3.01e-01 | 97.4% | 69.8% |
| 5044978 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.51 | 37.0 | 3.79e-01 | 76.9% | 88.0% |