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MG592459.1__AUR86211.1__NVP1084O_004__00004

Bact-Vir

MG592459.1__AUR86211.1__NVP1084O_004__00004

Identity

Accession:
MG592459 ↗
Kingdom:
phage

Quality

80.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-86
PDB
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.69 62.0 5.21e-01 100.0% 65.6%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.68 58.0 4.61e-01 100.0% 52.8%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.67 57.0 4.49e-01 100.0% 54.2%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.66 58.0 5.01e-01 100.0% 67.0%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 52.0 5.17e-01 93.0% 100.0%
4cshA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 54.0 4.03e-01 100.0% 43.9%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.65e-01 84.2% 88.9%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.63 49.0 4.81e-01 94.7% 98.5%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 50.0 4.95e-01 91.2% 100.0%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.14e-01 87.7% 83.3%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 45.0 4.76e-01 82.5% 100.0%
2k1gA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.61 52.0 4.08e-01 100.0% 48.1%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 52.0 4.62e-01 100.0% 98.8%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.07e-01 98.2% 63.9%
3npfA03 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.60 49.0 3.72e-01 100.0% 47.2%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.44e-01 82.5% 91.5%
5z8lA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.59 48.0 3.93e-01 96.5% 71.4%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.07e-01 82.5% 76.3%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.59 46.0 3.84e-01 87.7% 93.5%
5e6tA02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.59 47.0 4.17e-01 96.5% 98.9%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.68e-01 93.0% 84.4%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.14e-01 84.2% 78.9%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.35e-01 86.0% 100.0%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 48.0 3.58e-01 94.7% 72.7%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 46.0 4.72e-01 93.0% 100.0%
3h41A03 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.58 48.0 3.86e-01 100.0% 52.4%
2gsbA01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.58 40.0 3.62e-01 75.4% 57.1%
2e70A00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 43.0 4.07e-01 82.5% 73.2%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 42.0 4.31e-01 82.5% 89.3%
1wjrA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 3.57e-01 89.5% 77.2%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 4.48e-01 94.7% 88.4%
2kgyA00 3.30.505.20 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › 0.57 45.0 3.91e-01 89.5% 76.1%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.57 42.0 3.12e-01 86.0% 34.5%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.57 47.0 3.79e-01 100.0% 51.2%
3wjcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 42.0 3.21e-01 84.2% 58.2%
1mzpA01 3.30.190.20 Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribosomal protein L1/L10, rRNA-binding domain 0.56 44.0 3.61e-01 94.7% 87.3%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 40.0 2.55e-01 80.7% 99.7%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 40.0 3.25e-01 82.5% 74.0%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 46.0 4.34e-01 98.2% 97.2%
2jmbA00 2.40.128.290 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein family Atu4866 0.55 41.0 3.77e-01 82.5% 94.9%
1v5pA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 3.45e-01 82.5% 85.4%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 3.33e-01 82.5% 65.8%
3fppA01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.54 44.0 3.80e-01 100.0% 89.4%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.37e-01 82.5% 70.6%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 40.0 3.72e-01 87.7% 84.3%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.54 40.0 2.57e-01 80.7% 95.3%
2psbA00 3.50.90.10 Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like 0.54 44.0 2.87e-01 94.7% 82.8%
1lvoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 43.0 3.79e-01 100.0% 59.1%
4kc7A02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.53 39.0 3.46e-01 87.7% 99.0%
3licA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 35.0 2.60e-01 70.2% 29.8%
5j9bA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 36.0 2.77e-01 75.4% 77.9%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 43.0 2.73e-01 100.0% 35.6%
4kc3A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.51 38.0 2.97e-01 84.2% 82.5%
4p25D01 2.40.510.10 Mainly Beta › Beta Barrel › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Positive stranded ssRNA viruses 0.50 42.0 3.03e-01 100.0% 87.6%
2pbfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 40.0 2.79e-01 93.0% 63.3%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.50 41.0 2.70e-01 100.0% 36.6%
ECOD (75)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4584943 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.69 60.0 5.68e-01 100.0% 97.1%
3385461 219.1.1.18 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.69 60.0 4.50e-01 100.0% 50.3%
3970579 219.1.1.18 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.68 58.0 4.38e-01 100.0% 44.0%
4216845 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 57.0 5.35e-01 100.0% 90.4%
4139778 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 57.0 5.32e-01 100.0% 91.8%
4342110 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 57.0 5.31e-01 100.0% 90.4%
4269844 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.67 57.0 5.38e-01 100.0% 97.1%
4041376 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 56.0 5.13e-01 100.0% 88.7%
4124780 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 56.0 5.24e-01 100.0% 89.0%
4377781 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 56.0 5.11e-01 100.0% 97.5%
4205717 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 5.07e-01 100.0% 82.5%
4208040 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 5.21e-01 100.0% 93.2%
4122525 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 5.17e-01 100.0% 90.7%
1069946 219.1.1.52 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Tae4 0.66 58.0 4.20e-01 100.0% 37.4%
4084850 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 5.39e-01 100.0% 100.0%
4226849 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.66 55.0 5.06e-01 100.0% 82.5%
4318710 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 54.0 5.25e-01 98.2% 100.0%
4104821 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 53.0 4.99e-01 98.2% 85.3%
1394554 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.65 52.0 5.12e-01 93.0% 96.9%
4157193 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 54.0 5.17e-01 100.0% 94.3%
4093911 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.65 54.0 5.05e-01 100.0% 89.3%
490 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 53.0 4.98e-01 98.2% 94.6%
4214438 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 52.0 5.07e-01 94.7% 96.9%
4225787 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 53.0 4.53e-01 98.2% 70.0%
4140958 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 53.0 4.98e-01 100.0% 94.7%
4554867 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 51.0 5.00e-01 94.7% 96.9%
4248855 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 52.0 4.94e-01 100.0% 90.5%
4527355 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 53.0 5.11e-01 100.0% 95.7%
4162968 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 53.0 4.90e-01 100.0% 97.5%
4335951 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 54.0 5.04e-01 100.0% 95.9%
4185009 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.64 53.0 5.15e-01 98.2% 96.9%
4302032 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 53.0 5.17e-01 98.2% 96.9%
4168737 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.63 53.0 4.98e-01 100.0% 95.9%
4270910 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 52.0 4.95e-01 98.2% 97.1%
4252954 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 53.0 5.04e-01 100.0% 95.7%
4141828 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 53.0 4.94e-01 100.0% 95.9%
3357709 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.63 48.0 4.24e-01 84.2% 81.2%
4158712 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 50.0 4.79e-01 94.7% 90.0%
4323235 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 52.0 4.30e-01 98.2% 81.8%
4118552 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 52.0 4.86e-01 100.0% 93.3%
4177200 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.62 47.0 4.77e-01 84.2% 98.2%
3636432 4.1.1.314 beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like 0.62 49.0 3.31e-01 91.2% 53.3%
5040936 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.62 50.0 3.84e-01 100.0% 48.1%
4429329 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 51.0 4.99e-01 100.0% 100.0%
4282868 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 51.0 4.87e-01 98.2% 95.7%
4832857 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.62 48.0 4.38e-01 91.2% 84.3%
4299932 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.62 49.0 4.82e-01 94.7% 95.4%
4476045 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 51.0 4.90e-01 100.0% 94.3%
3551576 4.1.1.226 beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.61 50.0 4.63e-01 94.7% 88.0%
3753231 4.1.1.226 beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.61 51.0 4.71e-01 100.0% 86.3%
4491893 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.61 47.0 3.99e-01 87.7% 99.0%
4088209 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.61 50.0 4.86e-01 98.2% 98.5%
1828798 9.1.1.5 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Triabin 0.60 47.0 3.55e-01 87.7% 67.9%
5064548 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.60 46.0 4.70e-01 100.0% 92.5%
4121981 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.60 49.0 3.90e-01 94.7% 86.4%
4011604 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 47.0 4.42e-01 93.0% 89.3%
3597636 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.58 50.0 3.33e-01 96.5% 69.2%
3954140 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 43.0 2.77e-01 82.5% 91.7%
3222051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.58e-01 94.7% 90.8%
3581896 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.58 45.0 4.43e-01 91.2% 87.7%
3398496 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.58 43.0 4.37e-01 86.0% 96.4%
3244497 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.57 46.0 3.53e-01 94.7% 71.3%
3967347 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 44.0 4.13e-01 91.2% 94.7%
3218844 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 46.0 4.12e-01 100.0% 63.3%
3780847 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.56 47.0 3.60e-01 100.0% 71.3%
3660922 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.56 44.0 4.32e-01 91.2% 86.2%
3598283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 46.0 3.65e-01 98.2% 81.5%
4024290 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 41.0 3.16e-01 82.5% 80.7%
3756428 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.56 47.0 4.01e-01 100.0% 58.0%
4477674 219.1.1.36 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C92 0.56 44.0 3.33e-01 94.7% 83.6%
3933047 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.55 44.0 3.42e-01 100.0% 78.1%
4374163 2007.1.1.10 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase_3 0.55 39.0 2.66e-01 82.5% 21.0%
5017417 75.1.1.7 beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › PF26548 0.54 44.0 3.46e-01 100.0% 70.3%
3008562 219.1.1.43 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CoV_peptidase 0.52 43.0 2.94e-01 100.0% 24.6%
3927363 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 38.0 3.95e-01 86.0% 100.0%