←Back to structures
MG592459.1__AUR86223.1__NVP1084O_016__00016
Bact-VirMG592459.1__AUR86223.1__NVP1084O_016__00016
Identity
- Accession:
- MG592459 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Taxonomy
TaxID: 2070724
Cluster
View cluster (9 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 41-185
Domain cluster:
rep: IMGVR_UViG_3300039190_000305-3300039190-Ga0399989_003201_3_1937__D82-97_167-336
D2
high
residues 205-328
Domain cluster:
rep: BML_08182015_6_5m_scaffold_5_curated_closed_complete_prodigal-single.1__X__X__00058__D225-326
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z5bB03 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.63 | 54.0 | 5.10e-01 | 92.7% | 93.3% |
| 3zkbI02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.62 | 52.0 | 4.83e-01 | 91.9% | 88.1% |
| 3lnuA02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.61 | 52.0 | 4.81e-01 | 92.7% | 89.4% |
| 4hy1A02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.61 | 52.0 | 4.86e-01 | 93.5% | 84.8% |
| 1b63A02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.61 | 46.0 | 4.84e-01 | 80.6% | 91.2% |
| 3cwvA02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.58 | 49.0 | 4.64e-01 | 91.9% | 92.7% |
| 4ipeB02 | 3.30.230.80 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.57 | 49.0 | 4.47e-01 | 92.7% | 80.6% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 27.0 | 3.65e-01 | 88.7% | 90.3% |
| 6tmfL00 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.56 | 40.0 | 3.99e-01 | 87.9% | 70.5% |
| 4qt4A00 | 3.40.50.1470 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidyl-tRNA hydrolase | 0.53 | 39.0 | 3.45e-01 | 78.2% | 93.1% |
| 1zmbA01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.52 | 37.0 | 3.00e-01 | 73.4% | 90.7% |
| 6dqoA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.51 | 37.0 | 3.28e-01 | 74.2% | 100.0% |
| 4wy5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 38.0 | 2.81e-01 | 77.4% | 75.6% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4490100 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.64 | 53.0 | 5.36e-01 | 88.7% | 90.4% |
| 4493876 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.64 | 53.0 | 5.39e-01 | 87.9% | 93.3% |
| 5027974 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.64 | 56.0 | 5.60e-01 | 96.0% | 100.0% |
| 4935743 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.63 | 53.0 | 5.30e-01 | 89.5% | 100.0% |
| 3596948 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.63 | 52.0 | 5.06e-01 | 88.7% | 84.3% |
| 3968852 | 212.1.1.1 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › HSP90 | 0.63 | 54.0 | 5.01e-01 | 89.5% | 94.0% |
| 4231442 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.63 | 56.0 | 5.44e-01 | 95.2% | 98.5% |
| 4945732 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.62 | 52.0 | 4.69e-01 | 91.1% | 85.1% |
| 3967155 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.62 | 52.0 | 4.66e-01 | 91.1% | 83.4% |
| 4206916 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.62 | 51.0 | 5.13e-01 | 87.9% | 88.0% |
| 4503602 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.62 | 54.0 | 5.00e-01 | 95.2% | 78.8% |
| 3557551 | 212.1.1.24 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 | 0.62 | 54.0 | 5.31e-01 | 93.5% | 90.0% |
| 4288775 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.62 | 52.0 | 4.61e-01 | 91.1% | 81.7% |
| 4027043 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.62 | 52.0 | 4.67e-01 | 91.9% | 85.7% |
| 5068006 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.62 | 50.0 | 4.95e-01 | 86.3% | 93.1% |
| 4969342 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.62 | 48.0 | 4.82e-01 | 82.3% | 84.0% |
| 4404161 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.61 | 48.0 | 4.98e-01 | 83.1% | 93.0% |
| 4591201 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.61 | 53.0 | 5.23e-01 | 95.2% | 96.3% |
| 3964340 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.61 | 51.0 | 4.49e-01 | 91.1% | 82.7% |
| 4225685 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.61 | 52.0 | 5.23e-01 | 92.7% | 98.4% |
| 4380841 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.61 | 51.0 | 4.59e-01 | 91.9% | 84.6% |
| 2323907 | 212.1.1.24 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 | 0.61 | 52.0 | 4.25e-01 | 92.7% | 85.5% |
| 3807571 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.61 | 51.0 | 4.58e-01 | 91.9% | 84.6% |
| 4207771 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.61 | 51.0 | 4.60e-01 | 92.7% | 84.6% |
| 4306912 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.61 | 51.0 | 5.22e-01 | 91.1% | 100.0% |
| 5019898 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.61 | 53.0 | 5.21e-01 | 96.0% | 94.1% |
| 4943431 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 52.0 | 5.20e-01 | 92.7% | 98.4% |
| 4679301 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 54.0 | 5.18e-01 | 97.6% | 90.0% |
| 4242767 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 51.0 | 5.17e-01 | 91.9% | 97.6% |
| 3502190 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 54.0 | 5.32e-01 | 97.6% | 100.0% |
| 3869716 | 212.1.1.24 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 | 0.60 | 51.0 | 4.84e-01 | 92.7% | 79.3% |
| 4626790 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 51.0 | 5.02e-01 | 90.3% | 96.2% |
| 4679195 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 50.0 | 5.16e-01 | 90.3% | 100.0% |
| 4477199 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 49.0 | 4.92e-01 | 87.9% | 96.8% |
| 4589321 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 51.0 | 5.18e-01 | 91.9% | 100.0% |
| 4062719 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 51.0 | 5.17e-01 | 94.4% | 99.2% |
| 4653108 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 45.0 | 4.73e-01 | 79.0% | 93.6% |
| 4430113 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.60 | 52.0 | 5.20e-01 | 94.4% | 98.4% |
| 3487862 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.60 | 52.0 | 4.19e-01 | 95.2% | 81.2% |
| 4584496 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.59 | 50.0 | 5.00e-01 | 90.3% | 99.2% |
| 4094312 | 212.1.1.1 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › HSP90 | 0.59 | 53.0 | 4.89e-01 | 96.0% | 92.3% |
| 3246869 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.59 | 52.0 | 4.17e-01 | 95.2% | 79.6% |
| 4936482 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.59 | 50.0 | 5.05e-01 | 91.9% | 97.6% |
| 4158298 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.59 | 52.0 | 5.15e-01 | 96.8% | 96.9% |
| 341211 | 212.1.1.2 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_gyraseB | 0.59 | 49.0 | 4.64e-01 | 90.3% | 91.4% |
| 4623276 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.59 | 50.0 | 5.11e-01 | 92.7% | 100.0% |
| 4603589 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.59 | 51.0 | 5.02e-01 | 95.2% | 92.6% |
| 4494983 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.59 | 51.0 | 4.83e-01 | 95.2% | 98.7% |
| 4354451 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.59 | 49.0 | 4.90e-01 | 88.7% | 97.6% |
| 5049482 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.59 | 52.0 | 5.08e-01 | 97.6% | 96.3% |
| 3973573 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.59 | 49.0 | 4.95e-01 | 91.1% | 96.8% |
| 4195530 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.59 | 48.0 | 4.88e-01 | 87.9% | 98.3% |
| 3907248 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.59 | 49.0 | 4.65e-01 | 89.5% | 97.9% |
| 4480972 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.58 | 49.0 | 4.96e-01 | 91.1% | 97.6% |
| 1207703 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.58 | 47.0 | 4.72e-01 | 88.7% | 96.1% |
| 3615913 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.58 | 48.0 | 4.81e-01 | 91.1% | 96.2% |
| 3830910 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.58 | 47.0 | 4.87e-01 | 87.1% | 100.0% |
| 4679311 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.58 | 50.0 | 5.11e-01 | 95.2% | 100.0% |
| 4609772 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.58 | 46.0 | 4.87e-01 | 85.5% | 98.2% |
| 4522769 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.57 | 50.0 | 4.89e-01 | 96.0% | 95.0% |
| 4026123 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.57 | 46.0 | 4.44e-01 | 87.9% | 84.8% |
| 4940508 | 212.1.1.24 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 | 0.57 | 48.0 | 4.88e-01 | 91.9% | 95.8% |
| 3698907 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.57 | 47.0 | 4.83e-01 | 90.3% | 99.2% |
| 3310887 | 212.1.1.24 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Morc6_S5 | 0.56 | 47.0 | 4.77e-01 | 91.9% | 94.4% |
| 4655756 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.56 | 49.0 | 4.91e-01 | 94.4% | 100.0% |
| 3260383 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.55 | 46.0 | 4.50e-01 | 91.9% | 100.0% |
| 4671884 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.55 | 47.0 | 4.89e-01 | 92.7% | 100.0% |
| 3274759 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.55 | 46.0 | 4.74e-01 | 91.1% | 98.3% |
| 3786278 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.55 | 42.0 | 3.72e-01 | 82.3% | 96.3% |
| 3186561 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.55 | 46.0 | 4.54e-01 | 91.9% | 100.0% |
| 4026555 | 212.1.1.9 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › DNA_mis_repair | 0.55 | 47.0 | 4.71e-01 | 93.5% | 100.0% |
| 4149038 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.53 | 40.0 | 3.48e-01 | 78.2% | 91.0% |
| 4254001 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.53 | 40.0 | 3.50e-01 | 79.0% | 93.7% |
| 1731504 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.53 | 40.0 | 3.49e-01 | 79.0% | 92.6% |
| 3258552 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.53 | 39.0 | 3.43e-01 | 78.2% | 93.2% |
| 3814095 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.52 | 39.0 | 3.36e-01 | 78.2% | 86.3% |
| 4526774 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.52 | 39.0 | 3.34e-01 | 78.2% | 93.0% |
| 4281630 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.52 | 39.0 | 3.43e-01 | 79.0% | 89.7% |
| 4361495 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.52 | 38.0 | 3.36e-01 | 78.2% | 91.6% |
| 4347488 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.51 | 35.0 | 3.09e-01 | 70.2% | 84.4% |
| 4154256 | 2011.2.1.3 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › Pept_tRNA_hydro | 0.51 | 38.0 | 3.36e-01 | 78.2% | 91.1% |
| 4966296 | 212.1.1.25 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › MVD-like_N | 0.51 | 41.0 | 3.60e-01 | 85.5% | 70.0% |
D3
high
residues 378-469
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jgdA04 | 3.40.50.11610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain | 0.54 | 39.0 | 3.31e-01 | 91.3% | 44.7% |
| 3hlkB02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 46.0 | 3.30e-01 | 95.7% | 33.5% |
| 5tvwA01 | 3.40.50.11260 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 46.0 | 4.30e-01 | 98.9% | 100.0% |
| 4cjxA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 33.0 | 2.94e-01 | 77.2% | 40.7% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4479997 | 7579.1.1.2 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase | 0.67 | 56.0 | 3.85e-01 | 92.4% | 37.5% |
| 3276403 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.67 | 39.0 | 2.84e-01 | 82.6% | 20.8% |
| 1521337 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.65 | 35.0 | 3.53e-01 | 90.2% | 50.0% |
| 4676092 | 7579.1.1.26 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › BioG | 0.59 | 48.0 | 3.65e-01 | 91.3% | 35.8% |
| 3961439 | 2003.1.8.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like | 0.58 | 30.0 | 2.99e-01 | 90.2% | 44.2% |
| 4125018 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.57 | 35.0 | 3.36e-01 | 78.3% | 51.4% |
| 3690938 | 7579.1.1.8 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.54 | 46.0 | 3.30e-01 | 94.6% | 36.8% |
| 4361090 | 2007.1.3.16 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › KaiA_N | 0.53 | 33.0 | 2.85e-01 | 78.3% | 36.1% |
| 3321298 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.52 | 43.0 | 3.15e-01 | 92.4% | 35.4% |
| 2072188 | 7528.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › PGM_PMM_II | 0.51 | 31.0 | 2.97e-01 | 94.6% | 49.1% |
D4
high
residues 499-588
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hv1A02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 36.0 | 3.47e-01 | 72.2% | 80.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3755698 | 7579.1.1.2 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase | 0.57 | 49.0 | 3.45e-01 | 96.7% | 86.3% |
| 3600435 | 2488.1.1.1 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SpoU_methylase | 0.55 | 43.0 | 3.39e-01 | 86.7% | 95.5% |
| 3838841 | 2011.2.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like | 0.54 | 44.0 | 3.56e-01 | 88.9% | 58.9% |
| 2077750 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.51 | 38.0 | 3.27e-01 | 83.3% | 81.1% |
D5
high
residues 593-703
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5cofA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.62 | 46.0 | 4.00e-01 | 77.5% | 94.2% |
| 4an8A02 | 1.10.132.100 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.59 | 48.0 | 4.66e-01 | 86.5% | 83.6% |
| 7craA02 | 1.20.58.1480 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 29.0 | 3.17e-01 | 91.0% | 56.5% |
| 1yt3A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.53 | 40.0 | 3.36e-01 | 80.2% | 79.4% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 41.0 | 4.12e-01 | 82.0% | 89.3% |
| 2r5uC00 | 1.10.860.10 | Mainly Alpha › Orthogonal Bundle › DNAb Helicase; Chain A › DNAb Helicase; Chain A | 0.50 | 42.0 | 3.89e-01 | 90.1% | 84.8% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5009618 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 36.0 | 3.09e-01 | 72.1% | 72.2% |