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MG592459.1__AUR86228.1__NVP1084O_021__00021
Bact-VirMG592459.1__AUR86228.1__NVP1084O_021__00021
Identity
- Accession:
- MG592459 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Taxonomy
TaxID: 2070724
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-85
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pcrA01 | 3.10.450.460 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain | 0.68 | 44.0 | 4.07e-01 | 80.8% | 51.1% |
| 4dsdA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.66 | 46.0 | 3.84e-01 | 72.6% | 65.9% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.65 | 40.0 | 3.49e-01 | 84.9% | 41.7% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.62 | 46.0 | 3.96e-01 | 98.6% | 48.4% |
| 1u9tA02 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.61 | 49.0 | 3.78e-01 | 87.7% | 59.2% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.60 | 52.0 | 3.66e-01 | 95.9% | 66.7% |
| 4nvrA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 41.0 | 2.75e-01 | 74.0% | 70.5% |
| 6ro0B02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 41.0 | 3.67e-01 | 82.2% | 50.9% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 50.0 | 3.26e-01 | 100.0% | 31.7% |
| 3cawA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 49.0 | 4.57e-01 | 95.9% | 97.8% |
| 2qkdA03 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.57 | 38.0 | 4.44e-01 | 79.5% | 100.0% |
| 4hwmA00 | 2.40.128.500 | Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein | 0.56 | 48.0 | 4.14e-01 | 95.9% | 68.4% |
| 3flpA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 49.0 | 3.55e-01 | 100.0% | 74.7% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 41.0 | 3.80e-01 | 82.2% | 60.2% |
| 7c38B01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.55 | 49.0 | 3.21e-01 | 100.0% | 49.4% |
| 4fdtB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.55 | 47.0 | 3.04e-01 | 98.6% | 61.6% |
| 1w0pA03 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 48.0 | 3.60e-01 | 100.0% | 79.1% |
| 8gzhC01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.54 | 47.0 | 3.54e-01 | 97.3% | 87.3% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 46.0 | 3.45e-01 | 100.0% | 67.7% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 44.0 | 3.67e-01 | 93.2% | 92.8% |
| 4tz7A02 | 3.30.810.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase Iibeta; Chain: A, domain 2 › 2-Layer Sandwich | 0.51 | 43.0 | 3.53e-01 | 94.5% | 88.5% |
| 2xstA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 43.0 | 3.53e-01 | 100.0% | 78.5% |
| 2e63A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.51 | 43.0 | 3.31e-01 | 94.5% | 70.6% |
| 3i8tA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 45.0 | 3.67e-01 | 100.0% | 74.3% |
| 5g5gB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.51 | 40.0 | 3.80e-01 | 91.8% | 95.7% |
| 2aj4B01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.50 | 42.0 | 3.05e-01 | 100.0% | 60.9% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.50 | 42.0 | 2.99e-01 | 94.5% | 48.3% |
| 2l5qA01 | 2.30.30.730 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 32.0 | 3.62e-01 | 90.4% | 96.0% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3446029 | 859.1.1.1 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA | 0.68 | 50.0 | 3.89e-01 | 78.1% | 38.7% |
| 4929797 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.66 | 40.0 | 4.33e-01 | 75.3% | 72.9% |
| 6650 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.65 | 40.0 | 3.21e-01 | 84.9% | 32.4% |
| 3420430 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.65 | 44.0 | 3.62e-01 | 71.2% | 65.2% |
| 3934170 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.64 | 39.0 | 3.62e-01 | 84.9% | 47.4% |
| 3931696 | 241.4.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › Hypothetical protein c14orf129, hspc210 › Hypothetical protein c14orf129, hspc210 › GSKIP_dom | 0.63 | 39.0 | 3.46e-01 | 84.9% | 42.9% |
| 134994 | 10.1.1.21 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › 3keto-disac_hyd | 0.60 | 52.0 | 3.66e-01 | 95.9% | 66.7% |
| 3288144 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.60 | 49.0 | 4.53e-01 | 90.4% | 100.0% |
| 143269 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.59 | 43.0 | 3.57e-01 | 76.7% | 92.8% |
| 3739384 | 4075.1.1.2 ↗ | a+b complex topology › RGC domain › RGC domain › RGC domain › PF29130 | 0.59 | 48.0 | 4.36e-01 | 90.4% | 96.0% |
| 3891230 | 5.1.5.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WDR93 | 0.59 | 53.0 | 3.15e-01 | 100.0% | 31.0% |
| 4175964 | 244.3.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU | 0.58 | 46.0 | 4.26e-01 | 90.4% | 97.0% |
| 185792 | 9.17.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipoprotein YedD › Lipoprotein YedD › YedD | 0.57 | 48.0 | 4.17e-01 | 95.9% | 68.4% |
| 3377650 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 50.0 | 3.45e-01 | 100.0% | 55.1% |
| 3634739 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 48.0 | 2.90e-01 | 98.6% | 54.7% |
| 3057485 | 71.1.1.10 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_3 | 0.55 | 45.0 | 3.67e-01 | 95.9% | 96.1% |
| 3621408 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.55 | 48.0 | 3.15e-01 | 100.0% | 44.0% |
| 3706524 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.55 | 48.0 | 3.21e-01 | 100.0% | 69.2% |
| 3725228 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 47.0 | 3.06e-01 | 100.0% | 51.0% |
| None | — | 0.54 | 48.0 | 3.09e-01 | 100.0% | 29.7% | |
| 4929818 | 861.1.1.0 ↗ | a+b two layers › Mago nashi protein › Mago nashi protein › Mago nashi protein | 0.54 | 47.0 | 3.91e-01 | 100.0% | 89.6% |
| 3785140 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 46.0 | 3.92e-01 | 98.6% | 89.6% |
| 3229131 | 5.1.5.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Vps16_N | 0.54 | 47.0 | 3.21e-01 | 100.0% | 51.1% |
| 4178829 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.52 | 38.0 | 3.18e-01 | 76.7% | 91.2% |
| 3300456 | 375.1.1.9 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom | 0.52 | 37.0 | 3.34e-01 | 89.0% | 54.0% |
| 3923579 | 5.1.4.167 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR19_1st | 0.52 | 44.0 | 2.88e-01 | 100.0% | 31.7% |
| 4612221 | 2484.1.1.12 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Acetate_kinase | 0.51 | 44.0 | 3.26e-01 | 100.0% | 61.0% |
| 3573161 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.51 | 42.0 | 2.76e-01 | 100.0% | 57.1% |
| 5016556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 41.0 | 3.86e-01 | 91.8% | 81.1% |
| 3585414 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.50 | 42.0 | 3.71e-01 | 93.2% | 75.5% |
| 4912784 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 43.0 | 2.98e-01 | 100.0% | 39.6% |
| 3511356 | 4056.1.1.1 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6 | 0.50 | 42.0 | 3.82e-01 | 97.3% | 75.2% |