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MG592463.1__AUR86730.1__NVP1088O_82__00082
Bact-VirMG592463.1__AUR86730.1__NVP1088O_82__00082
Identity
- Accession:
- MG592463 ↗
- Kingdom:
- phage
Quality
69.3
mean pLDDT
Taxonomy
TaxID: 1881317
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 52-107
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4dkjA02 | 3.90.120.10 | Alpha Beta › Alpha-Beta Complex › DNA Methylase; Chain A, domain 2 › DNA Methylase, subunit A, domain 2 | 0.68 | 59.0 | 4.99e-01 | 96.4% | 94.6% |
| 1svuA02 | 3.90.120.10 | Alpha Beta › Alpha-Beta Complex › DNA Methylase; Chain A, domain 2 › DNA Methylase, subunit A, domain 2 | 0.64 | 55.0 | 4.61e-01 | 98.2% | 95.9% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.59 | 48.0 | 3.64e-01 | 94.6% | 36.9% |
| 7lxuE01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.56 | 44.0 | 3.14e-01 | 94.6% | 89.7% |
| 2p4zA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 46.0 | 3.04e-01 | 100.0% | 38.9% |
| 3tm8B00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.54 | 40.0 | 2.64e-01 | 87.5% | 60.9% |
| 3qvnA02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.53 | 37.0 | 3.00e-01 | 75.0% | 66.7% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 36.0 | 3.30e-01 | 71.4% | 71.1% |
| 4kc3B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.33e-01 | 82.1% | 69.5% |
| 1fm0E00 | 3.90.1170.40 | Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Molybdopterin biosynthesis MoaE subunit | 0.51 | 41.0 | 3.13e-01 | 87.5% | 67.6% |
| 4iwxA03 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 38.0 | 3.10e-01 | 82.1% | 71.2% |
| 2pndA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.16e-01 | 87.5% | 69.7% |
| 4iupB01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 34.0 | 3.39e-01 | 71.4% | 96.8% |
| 4aeeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.27e-01 | 85.7% | 62.9% |
| 4fchA02 | 2.60.40.3610 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 39.0 | 3.30e-01 | 91.1% | 97.1% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3788443 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.53 | 37.0 | 3.83e-01 | 73.2% | 92.0% |
| 3904389 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 39.0 | 3.59e-01 | 85.7% | 72.5% |
| 3659645 | 325.1.2.1 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Molybdopterin synthase subunit MoaE › MoaE | 0.52 | 38.0 | 2.98e-01 | 85.7% | 67.3% |
| 3908017 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.52 | 35.0 | 3.19e-01 | 71.4% | 80.0% |
| 3855824 | 221.1.1.53 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_3 | 0.51 | 36.0 | 3.15e-01 | 76.8% | 61.1% |
| 3727999 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.50 | 37.0 | 2.22e-01 | 83.9% | 60.0% |