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MG592468.1__AUR87123.1__NVP1094O_72__00072

Bact-Vir

MG592468.1__AUR87123.1__NVP1094O_72__00072

Identity

Accession:
MG592468 ↗
Kingdom:
phage

Quality

88.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.094.O._10N.286.55.E12

TaxID: 1881400

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 261-339
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6t0bf00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.80 62.0 5.65e-01 86.1% 63.7%
4edgA03 1.20.50.20 Mainly Alpha › Up-down Bundle › Pheromone ER-1 › DnaG, RNA polymerase domain, helical bundle 0.74 52.0 5.78e-01 72.2% 100.0%
3a6pA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.69 52.0 2.87e-01 79.7% 11.8%
4adnA01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.69 48.0 4.68e-01 72.2% 70.6%
6tkyA03 1.20.58.740 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C 0.68 52.0 4.53e-01 82.3% 99.2%
4kx7A04 1.25.50.20 Mainly Alpha › Alpha Horseshoe › Zincin-like fold › 0.67 51.0 3.40e-01 87.3% 20.1%
1sxjE03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.66 46.0 4.28e-01 72.2% 99.0%
2katA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 47.0 4.18e-01 77.2% 53.0%
3cqcB01 1.20.58.1380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.64 46.0 4.44e-01 75.9% 73.3%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 55.0 4.29e-01 98.7% 61.5%
2vvwA00 1.10.437.20 Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › dsDNA poxvirus 0.64 50.0 4.14e-01 87.3% 51.3%
4a8eA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.63 46.0 4.50e-01 77.2% 74.7%
4k6jB00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.63 48.0 3.00e-01 83.5% 15.7%
4p3fA00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.62 45.0 3.48e-01 77.2% 44.6%
2i2oA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.61 50.0 3.73e-01 91.1% 37.0%
2g47A03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.61 44.0 3.20e-01 75.9% 73.1%
3d3oA00 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.61 52.0 4.11e-01 97.5% 78.4%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.60 43.0 4.23e-01 75.9% 72.1%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.60 51.0 4.56e-01 93.7% 82.1%
2ew2A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.60 42.0 3.64e-01 75.9% 56.0%
3au4A01 1.25.40.530 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain 0.59 51.0 3.91e-01 98.7% 73.5%
7lb8B01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.59 50.0 3.29e-01 92.4% 97.8%
6vvoE02 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.58 44.0 4.16e-01 82.3% 100.0%
5dikA00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.58 45.0 4.13e-01 87.3% 63.4%
7qocA01 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.58 45.0 3.49e-01 86.1% 46.0%
1brwA02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.57 51.0 3.54e-01 100.0% 88.6%
2i53A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 50.0 4.11e-01 98.7% 62.2%
2ygwA01 1.20.140.90 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Malonyl-CoA decarboxylase, oligemerization domain 0.57 43.0 3.54e-01 83.5% 76.5%
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.56 45.0 4.15e-01 91.1% 99.1%
1bwoA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.56 43.0 4.19e-01 84.8% 85.6%
2lyiA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.56 42.0 3.44e-01 81.0% 48.6%
6axgA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.54 42.0 4.12e-01 84.8% 97.8%
4eadA02 3.40.1030.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyrimidine Nucleoside Phosphorylase; Chain A, domain 2 › Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 0.54 47.0 3.44e-01 100.0% 87.3%
1hqoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 38.0 3.30e-01 74.7% 88.5%
1vt0M05 6.10.280.90 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 41.0 4.20e-01 98.7% 87.8%
1vnsA01 1.20.144.10 Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase 0.53 43.0 3.39e-01 91.1% 96.6%
2zs0A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 43.0 3.60e-01 89.9% 67.1%
1bbhA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.52 45.0 3.84e-01 96.2% 77.1%
4l3tA03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.51 43.0 3.24e-01 98.7% 81.0%
3u4qA02 1.10.274.50 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › 0.51 39.0 3.13e-01 79.7% 46.7%
5fhiA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.51 42.0 3.61e-01 96.2% 59.7%
2olpA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 44.0 3.65e-01 100.0% 76.2%
1un8A02 1.25.40.340 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain 0.50 42.0 3.25e-01 94.9% 65.1%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3467990 109.4.1.1291 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif 0.85 67.0 3.83e-01 82.3% 10.4%
3349457 109.4.1.420 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR 0.81 60.0 5.43e-01 78.5% 63.8%
4392906 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.75 60.0 4.27e-01 87.3% 35.3%
3201093 109.4.1.465 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SPO22 0.73 56.0 3.26e-01 81.0% 11.0%
1692482 3651.1.1.0 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.72 58.0 5.72e-01 86.1% 90.4%
3970414 109.51.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › TssA helical domains › TssA helical domains › T6SS_VasJ 0.72 51.0 4.29e-01 73.4% 51.1%
3903390 109.4.1.613 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Asp_Glu_race_2 0.71 58.0 4.46e-01 87.3% 45.3%
4940672 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.70 53.0 4.85e-01 81.0% 61.0%
3192756 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 54.0 3.72e-01 84.8% 31.9%
3263853 603.1.1.98 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE, Syntaxin_2 0.68 51.0 3.87e-01 81.0% 91.3%
4436319 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.68 50.0 3.62e-01 78.5% 31.8%
3682347 109.4.1.1125 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TAF2_C 0.68 55.0 3.66e-01 87.3% 26.4%
4647208 109.4.1.1259 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_PBS, HEAT_2 0.67 50.0 3.72e-01 86.1% 31.0%
4997044 601.28.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like 0.67 46.0 4.20e-01 70.9% 74.3%
3238033 109.40.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › DNA polymerase alpha-binding protein Ctf4 C-terminal domain › Ctf4_C 0.66 50.0 4.52e-01 82.3% 60.9%
3315608 185.1.1.1 ↗ alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl 0.65 46.0 4.20e-01 73.4% 77.1%
2738699 109.4.1.1125 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TAF2_C 0.65 49.0 4.96e-01 83.5% 84.8%
3297319 611.3.1.1 ↗ alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 0.64 49.0 4.65e-01 82.3% 71.6%
3544312 109.4.1.2 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Arm 0.64 49.0 3.49e-01 83.5% 31.0%
3258267 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.64 49.0 3.39e-01 83.5% 40.7%
4038724 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 52.0 3.92e-01 96.2% 60.5%
3724045 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 48.0 3.73e-01 83.5% 38.9%
3393682 109.4.1.1720 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N, TPR_IMB1, TPR_IPO5 0.62 49.0 2.81e-01 86.1% 9.7%
4954547 237.1.1.8 ↗ a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ADPrib_exo_Tox 0.62 46.0 3.47e-01 79.7% 74.0%
3381244 109.4.1.167 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rif1_N 0.62 54.0 3.58e-01 98.7% 72.7%
3614289 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.62 48.0 3.06e-01 84.8% 17.3%
4989330 608.1.1.1 ↗ alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD 0.61 48.0 4.27e-01 87.3% 63.5%
4940127 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.60 46.0 4.00e-01 81.0% 87.5%
3399531 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.57 42.0 3.89e-01 78.5% 74.0%
4462190 109.4.1.1283 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_PBS, HEAT_2 0.56 48.0 3.43e-01 98.7% 92.4%
3267790 109.3.1.171 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › PF29011 0.55 41.0 3.26e-01 79.7% 94.7%
4955899 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.54 41.0 3.67e-01 81.0% 60.9%
3955107 106.1.1.11 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › RsbRD_N 0.50 43.0 3.57e-01 100.0% 74.8%
D2 high residues 345-424
PDB
Domain cluster: rep: MN592897.1__QGT52237.1__X__00012__D438-512
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3410932 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.53 34.0 3.31e-01 75.0% 54.7%
D3 high residues 664-745
PDB
Domain cluster: rep: JN564907.1__AEY69588.1__AH2_00078__00078__D729-823
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.63e-01 100.0% 66.7%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.77e-01 100.0% 72.9%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 48.0 4.41e-01 98.8% 64.3%
1fbqA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 53.0 5.18e-01 100.0% 97.7%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 43.0 4.56e-01 100.0% 92.9%
4p55B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.77e-01 96.3% 97.9%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.59 48.0 4.83e-01 98.8% 91.4%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 47.0 4.27e-01 100.0% 65.0%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 41.0 3.58e-01 100.0% 46.7%
2kpmA01 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.57 46.0 4.73e-01 96.3% 100.0%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.56 46.0 4.70e-01 100.0% 97.5%
1ef0B02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.56 40.0 3.16e-01 100.0% 33.0%
2ip2A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 43.0 3.14e-01 84.1% 65.0%
3bxoA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 43.0 3.42e-01 84.1% 88.1%
4m1xD00 3.30.1360.240 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.55 38.0 4.05e-01 95.1% 83.3%
1u5tB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 47.0 4.71e-01 100.0% 98.8%
4qdjA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 42.0 3.15e-01 98.8% 32.7%
1zhsA01 3.30.1490.230 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.54 27.0 3.16e-01 70.7% 65.5%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.53 36.0 3.62e-01 84.1% 68.6%
1im8B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 41.0 3.02e-01 85.4% 80.7%
3dtnA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 39.0 3.03e-01 98.8% 35.3%
1dcjA00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.51 37.0 3.78e-01 98.8% 77.8%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 42.0 4.08e-01 100.0% 81.1%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 35.0 3.60e-01 97.6% 77.3%
8k5lA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.51 39.0 3.00e-01 84.1% 82.8%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4045503 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.68 36.0 3.80e-01 75.6% 56.0%
4609020 101.1.2.642 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF3631 0.63 54.0 5.34e-01 100.0% 90.0%
4978412 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.63 51.0 4.05e-01 100.0% 42.3%
4999286 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 49.0 3.93e-01 100.0% 40.6%
3602264 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.62 45.0 4.51e-01 100.0% 75.3%
4959927 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.62 49.0 3.92e-01 98.8% 42.4%
3729476 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.61 50.0 4.55e-01 100.0% 66.1%
4978090 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.61 48.0 3.65e-01 100.0% 34.0%
3271616 101.1.2.147 ↗ alpha arrays › HTH › HTH › winged helix domain › ORC4_C 0.60 53.0 4.66e-01 100.0% 68.8%
3285760 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.60 50.0 3.93e-01 100.0% 42.8%
3701431 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.60 52.0 4.16e-01 100.0% 50.0%
3628572 101.1.2.148 ↗ alpha arrays › HTH › HTH › winged helix domain › ORC5_C 0.60 52.0 4.57e-01 100.0% 71.2%
4015688 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 50.0 4.89e-01 100.0% 86.7%
4487383 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.59 51.0 4.68e-01 100.0% 77.3%
5048462 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 49.0 4.33e-01 100.0% 62.4%
4028966 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 44.0 4.36e-01 100.0% 75.6%
3743842 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.58 49.0 4.70e-01 98.8% 80.0%
3805546 101.1.2.24 ↗ alpha arrays › HTH › HTH › winged helix domain › MAGE 0.58 50.0 4.53e-01 100.0% 69.6%
3265825 101.1.2.65 ↗ alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.57 48.0 4.73e-01 100.0% 87.8%
3788427 101.1.2.207 ↗ alpha arrays › HTH › HTH › winged helix domain › TFC3_eWH 0.56 48.0 4.56e-01 100.0% 80.0%
4140251 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.56 39.0 3.22e-01 100.0% 40.0%
3700237 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.56 48.0 4.21e-01 100.0% 63.8%
4967545 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.55 44.0 3.39e-01 87.8% 77.9%
3783974 101.1.2.34 ↗ alpha arrays › HTH › HTH › winged helix domain › RFX_DNA_binding 0.55 47.0 3.61e-01 100.0% 47.1%
3174361 101.1.2.312 ↗ alpha arrays › HTH › HTH › winged helix domain › MSC 0.55 47.0 3.49e-01 100.0% 35.3%
5045911 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 4.40e-01 100.0% 77.1%
2694 101.1.2.57 ↗ alpha arrays › HTH › HTH › winged helix domain › EAP30 0.55 47.0 4.53e-01 100.0% 89.4%
4974810 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.55 43.0 3.25e-01 85.4% 80.4%
3382927 2003.1.5.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.54 44.0 3.28e-01 87.8% 49.5%
3708135 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.54 43.0 3.16e-01 86.6% 79.9%
5046136 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 46.0 3.99e-01 100.0% 58.6%
3704256 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 43.0 4.33e-01 100.0% 92.5%
4960468 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.53 42.0 3.18e-01 87.8% 75.6%
None — 0.53 43.0 3.28e-01 87.8% 94.2%
4681320 306.7.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N 0.53 36.0 3.25e-01 70.7% 69.6%
3879952 108.1.1.189 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand › WEF-hand 0.52 39.0 3.73e-01 96.3% 67.0%
3177030 306.3.1.1 ↗ a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 0.52 36.0 3.35e-01 84.1% 54.5%
5025579 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.52 41.0 3.31e-01 86.6% 85.3%
5025354 2003.1.5.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran 0.52 40.0 3.08e-01 85.4% 82.9%
4130731 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.52 47.0 3.82e-01 100.0% 54.7%
5030011 2003.1.5.79 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.52 41.0 3.05e-01 86.6% 68.4%
4659154 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.52 44.0 3.65e-01 100.0% 51.0%
4999706 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.52 41.0 3.02e-01 87.8% 67.1%
4670926 2003.1.5.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.51 39.0 2.80e-01 84.1% 81.1%
3443785 101.1.2.137 ↗ alpha arrays › HTH › HTH › winged helix domain › OST-HTH 0.51 43.0 4.16e-01 100.0% 88.0%
3789655 213.1.1.0 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.51 37.0 3.48e-01 100.0% 61.0%
4138496 2003.1.5.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.51 38.0 2.87e-01 82.9% 79.1%
4119013 2003.1.5.3 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.50 44.0 3.18e-01 98.8% 85.7%
3989458 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.50 42.0 3.48e-01 97.6% 96.4%
3700362 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.50 44.0 4.16e-01 100.0% 88.9%
4123855 2003.1.5.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran 0.50 43.0 3.15e-01 95.1% 98.7%
4991352 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.50 41.0 2.90e-01 92.7% 55.4%
4388828 2003.1.5.49 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_30 0.50 40.0 2.99e-01 92.7% 71.8%
D4 medium residues 35-166
PDB
Domain cluster: rep: NC_027397.1__YP_009153053.1__ACQ41_gp27__00027__D86-201
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09250.17 best Prim-Pol 26.1 1.40e-05 81.8% 50.0%
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rniA02 3.30.2250.10 Alpha Beta › 2-Layer Sandwich › Prim-pol fold › Bifunctional DNA primase/polymerase domain 0.58 48.0 5.09e-01 90.2% 100.0%
3h20A02 3.30.70.1790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RepB DNA-primase, N-terminal domain 0.58 43.0 4.74e-01 78.0% 100.0%
4pg4B03 3.30.70.3100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 33.0 4.03e-01 73.5% 98.7%
2m6pA00 2.20.28.270 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A 0.56 22.0 3.49e-01 93.9% 100.0%
1mw7A03 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.56 32.0 3.99e-01 71.2% 98.7%
1sjrA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 38.0 4.19e-01 78.8% 89.8%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 36.0 3.97e-01 75.0% 86.4%
2cqiA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.54 34.0 3.77e-01 72.0% 81.6%
2jwnA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 32.0 3.58e-01 70.5% 78.0%
4qu6A01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 35.0 4.07e-01 75.0% 100.0%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 35.0 3.95e-01 73.5% 89.9%
3tviA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.52 36.0 3.44e-01 71.2% 82.4%
2mzqA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 33.0 3.69e-01 71.2% 83.2%
2f9jA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 32.0 3.78e-01 70.5% 97.5%
1p1tA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.52 37.0 4.09e-01 76.5% 96.2%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 31.0 3.71e-01 71.2% 95.1%
1sjqA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 33.0 3.76e-01 75.8% 94.3%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.51 30.0 3.67e-01 72.0% 97.4%
7qddB01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 30.0 3.65e-01 71.2% 100.0%
3dkxA01 3.40.1310.30 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.51 38.0 3.81e-01 77.3% 94.8%
3smzA03 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 34.0 3.76e-01 75.0% 89.7%
2mzjA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 32.0 3.75e-01 71.2% 98.8%
2ia0B02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.50 34.0 3.79e-01 76.5% 91.9%
1whxA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 32.0 3.43e-01 71.2% 74.8%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3280020 862.1.1.3 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol 0.75 64.0 5.75e-01 93.2% 68.0%
4959587 862.1.1.3 ↗ a+b complex topology › Prim-pol domain › Prim-pol domain › Prim-pol domain › Prim-Pol 0.65 54.0 4.94e-01 91.7% 68.2%
3539036 304.9.1.18 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Tap-RNA_bind 0.60 36.0 4.30e-01 72.0% 88.9%
3897640 304.9.1.18 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Tap-RNA_bind 0.59 37.0 4.44e-01 74.2% 93.3%
3934303 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 36.0 4.39e-01 70.5% 100.0%
3279865 5067.1.1.4 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL 0.58 41.0 2.85e-01 74.2% 46.4%
5017965 304.24.1.5 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N 0.57 30.0 3.87e-01 74.2% 100.0%
3502805 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.56 37.0 3.64e-01 78.0% 61.4%
3730070 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.55 34.0 3.90e-01 76.5% 86.7%
3182321 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.55 34.0 3.79e-01 78.8% 80.0%
3642508 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.55 34.0 3.57e-01 70.5% 67.5%
5083546 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.54 33.0 3.97e-01 72.0% 97.5%
5031941 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.54 33.0 3.76e-01 74.2% 83.2%
3707681 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.54 35.0 3.08e-01 78.8% 42.5%
3599549 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.54 34.0 3.93e-01 73.5% 88.4%
3508377 304.9.1.79 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28976 0.53 35.0 3.67e-01 78.0% 72.5%
3629242 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.53 37.0 3.77e-01 71.2% 73.8%
3805699 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.53 32.0 3.77e-01 74.2% 93.8%
3249128 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.53 33.0 3.76e-01 71.2% 87.8%
3797378 304.9.1.79 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28976 0.53 34.0 3.43e-01 72.0% 61.4%
3255539 304.112.1.0 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.52 31.0 3.76e-01 72.0% 95.0%
3786355 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.52 31.0 3.25e-01 72.0% 61.6%
3891298 304.9.1.77 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28441 0.52 37.0 3.88e-01 75.8% 99.2%
3505241 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.52 33.0 3.70e-01 72.0% 87.4%
None — 0.51 35.0 3.70e-01 70.5% 77.5%
3168171 304.112.1.10 ↗ a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › Med13_N 0.51 31.0 3.73e-01 75.0% 95.3%
3904891 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.50 32.0 3.68e-01 75.8% 89.5%
3459698 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.50 34.0 3.86e-01 74.2% 95.8%
3613011 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.50 32.0 3.59e-01 71.2% 83.0%
D5 medium residues 178-209_231-256
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4410482 2003.1.5.8 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Ubie_methyltran 0.51 41.0 2.91e-01 100.0% 81.3%
D6 medium residues 438-488
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.58 43.0 2.99e-01 86.3% 44.3%
1pnkA02 1.10.287.150 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 39.0 4.10e-01 72.5% 78.3%
3jvoA00 1.10.3230.30 Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › Phage gp6-like head-tail connector protein 0.55 42.0 3.43e-01 84.3% 69.8%
D7 medium residues 489-661
PDB
Domain cluster: rep: MN062720.1__QDP45567.1__SEA_FUZZBUSTER_83__00083__D568-722_747-764
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF19263.6 best DUF5906 64.0 2.70e-17 61.3% 93.8%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tueD00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.75 59.0 5.60e-01 90.2% 69.8%
1gehA02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.58 45.0 3.78e-01 82.1% 80.5%
1gkpA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.56 46.0 3.70e-01 89.6% 89.9%
1amuA02 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 36.0 3.92e-01 100.0% 80.0%
6arhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 41.0 3.46e-01 78.6% 89.3%
4l9yD00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.54 42.0 3.68e-01 82.1% 94.7%
1dxyA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 37.0 4.14e-01 97.1% 91.7%
3dg3A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 40.0 3.59e-01 80.9% 75.4%
1mzhA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.52 40.0 3.69e-01 80.3% 92.4%
4tv5A00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.52 39.0 3.55e-01 79.2% 84.1%
2zpaA01 3.40.50.11040 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.52 37.0 3.69e-01 90.8% 70.4%
3ezsA02 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.51 41.0 3.71e-01 86.1% 71.0%
3hpaA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.50 41.0 3.43e-01 87.9% 91.3%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3253892 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.88 70.0 6.67e-01 87.3% 71.8%
5029777 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.80 75.0 6.45e-01 100.0% 67.1%
5081314 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.79 74.0 6.33e-01 100.0% 65.4%
3945876 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.79 72.0 6.13e-01 99.4% 62.6%
4959586 2004.1.1.409 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF5906 0.79 75.0 6.22e-01 100.0% 62.4%
5011495 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 56.0 5.28e-01 99.4% 67.0%
3702069 2004.1.1.181 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_7 0.70 51.0 4.72e-01 73.4% 71.8%
None — 0.69 49.0 4.62e-01 75.1% 61.5%
4486719 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.67 41.0 4.73e-01 77.5% 83.2%
5059557 2004.1.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA 0.64 47.0 4.02e-01 76.3% 57.1%
4009631 2004.1.1.264 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF3987 0.62 56.0 4.63e-01 100.0% 92.5%
4573973 2002.1.1.76 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC 0.53 41.0 3.77e-01 79.2% 93.3%
3205525 2002.1.1.76 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC 0.53 42.0 3.63e-01 82.1% 87.4%
4384157 2002.1.1.76 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DeoC 0.53 40.0 3.77e-01 79.8% 96.3%
4487278 2002.1.1.66 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.52 40.0 3.73e-01 80.3% 76.4%
4997463 2002.1.1.60 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › AP_endonuc_2 0.52 41.0 3.55e-01 82.7% 87.8%
4944532 7522.1.1.0 ↗ a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like 0.51 34.0 3.69e-01 96.0% 82.1%
4369731 7522.1.1.1 ↗ a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C 0.51 34.0 3.79e-01 90.2% 85.5%