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MG592473.1__AUR87556.1__NVP1101O_145__00145

Bact-Vir

MG592473.1__AUR87556.1__NVP1101O_145__00145

Identity

Accession:
MG592473 ↗
Kingdom:
phage

Quality

81.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.101.O._10N.261.45.C6

TaxID: 2070725

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-138
PDB
Domain cluster: representative
CATH (28)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kktA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.65 49.0 4.77e-01 100.0% 71.4%
1orfA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.64 44.0 4.23e-01 96.8% 62.9%
5i7pA02 2.40.10.330 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.62 33.0 4.33e-01 75.5% 100.0%
2f91A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 45.0 4.24e-01 97.9% 64.6%
6mv4H02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 43.0 4.14e-01 97.9% 64.8%
3f1sB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 40.0 4.07e-01 100.0% 71.0%
1eq9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 41.0 3.98e-01 97.9% 64.8%
5lhrA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 44.0 4.16e-01 100.0% 65.0%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.59 42.0 4.51e-01 97.9% 88.6%
4lk4A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.59 42.0 4.23e-01 100.0% 75.0%
5dj7A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 41.0 3.99e-01 100.0% 64.8%
3tvjB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 43.0 4.14e-01 98.9% 68.2%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 46.0 4.20e-01 100.0% 64.5%
1a5iA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 43.0 4.01e-01 100.0% 62.7%
3ne5C02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.58 42.0 4.13e-01 97.9% 70.6%
1fuiA03 3.20.14.10 Alpha Beta › Alpha-Beta Barrel › L-fucose Isomerase; Chain A, domain 3 › L-fucose/L-arabinose isomerase, C-terminal 0.58 51.0 3.79e-01 100.0% 59.4%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.57 43.0 3.91e-01 98.9% 59.7%
6gmhK00 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.57 38.0 3.55e-01 100.0% 54.8%
5fcrC02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 42.0 4.03e-01 100.0% 68.2%
2r0lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 43.0 4.11e-01 100.0% 69.0%
1ltoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 40.0 3.85e-01 100.0% 65.1%
4h4fA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 40.0 3.87e-01 100.0% 65.5%
3cp7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 42.0 4.03e-01 100.0% 69.4%
5f8zA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 40.0 3.83e-01 100.0% 66.1%
1dx5M02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 43.0 4.00e-01 100.0% 68.1%
3cp3A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 44.0 4.01e-01 98.9% 66.1%
4kkdB04 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 42.0 3.86e-01 100.0% 64.5%
3dohA01 2.60.40.2180 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 40.0 3.63e-01 100.0% 61.5%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4981303 284.4.1.0 ↗ a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.64 37.0 4.63e-01 80.9% 98.2%
3987460 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.63 48.0 4.55e-01 98.9% 69.1%
4951165 284.4.1.0 ↗ a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.62 37.0 4.47e-01 83.0% 100.0%
3626966 1.1.7.90 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ZNFX1 0.61 46.0 4.43e-01 100.0% 69.1%
3978576 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 46.0 4.34e-01 100.0% 67.3%
3967199 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 46.0 4.45e-01 100.0% 72.4%
3973282 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.60 47.0 4.48e-01 100.0% 71.8%
3586469 4.1.1.287 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5641 0.58 33.0 3.42e-01 71.3% 58.8%
4448334 325.1.7.0 ↗ a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.58 39.0 4.55e-01 75.5% 100.0%
3973898 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.57 47.0 4.07e-01 100.0% 57.2%
4427477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 31.0 3.14e-01 71.3% 52.6%
3165269 1.1.5.13 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S6 0.56 42.0 2.98e-01 100.0% 26.9%
3736920 3589.1.1.1 ↗ a+b complex topology › RNAi polymerase N-terminal domain › RNAi polymerase N-terminal domain › RNAi polymerase N-terminal domain › RdRP 0.55 50.0 3.55e-01 100.0% 49.8%
3555467 1.1.7.7 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 0.55 41.0 3.92e-01 100.0% 67.0%
2163689 1.1.5.2 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin,Thrombin_light 0.54 42.0 2.96e-01 100.0% 25.2%
4518149 1.1.13.59 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Beta-barrel_GLAA-B_II 0.54 42.0 4.21e-01 100.0% 84.2%
3986600 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.53 45.0 4.02e-01 100.0% 65.4%
3981111 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.53 41.0 3.51e-01 100.0% 50.3%
4953386 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.53 48.0 4.20e-01 98.9% 70.7%
4372404 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.53 38.0 3.79e-01 77.7% 71.0%
3252646 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.53 42.0 3.69e-01 98.9% 57.1%
5004559 1.1.13.75 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube 0.52 45.0 4.05e-01 96.8% 85.9%
5038472 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 46.0 4.42e-01 100.0% 82.7%
3728335 872.1.1.0 ↗ a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.51 38.0 3.66e-01 80.9% 98.2%
4202541 1.1.9.23 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 0.51 42.0 4.00e-01 98.9% 75.7%
3700204 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.50 42.0 2.68e-01 94.7% 61.3%