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MG592475.1__AUR87719.1__NVP1103O_62__00062
Bact-VirMG592475.1__AUR87719.1__NVP1103O_62__00062
Identity
- Accession:
- MG592475 ↗
- Kingdom:
- phage
Quality
81.4
mean pLDDT
Taxonomy
TaxID: 1881425
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-57
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zetC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.78 | 48.0 | 3.54e-01 | 86.0% | 25.5% |
| 2xqnT01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.72 | 47.0 | 4.59e-01 | 89.5% | 61.3% |
| 3o58V00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.70 | 47.0 | 4.65e-01 | 87.7% | 67.8% |
| 1y8fA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 47.0 | 4.92e-01 | 93.0% | 80.4% |
| 2xzmZ00 | 3.30.1230.20 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 | 0.64 | 56.0 | 4.73e-01 | 100.0% | 70.1% |
| 2rowA01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.61 | 47.0 | 4.40e-01 | 98.2% | 67.6% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 52.0 | 5.00e-01 | 98.2% | 89.4% |
| 6inxA02 | 3.10.50.10 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.58 | 40.0 | 3.86e-01 | 71.9% | 93.8% |
| 2m3lA00 | 3.30.240.40 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › E6 early regulatory protein | 0.56 | 41.0 | 3.80e-01 | 86.0% | 60.5% |
| 2k16A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.53 | 47.0 | 4.31e-01 | 100.0% | 76.0% |
| 2miuA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.51 | 42.0 | 3.62e-01 | 100.0% | 56.1% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3934269 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.68 | 45.0 | 5.11e-01 | 75.4% | 97.5% |
| 4965846 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.68 | 50.0 | 5.54e-01 | 80.7% | 100.0% |
| 3743625 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.67 | 56.0 | 4.49e-01 | 94.7% | 77.4% |
| 3192543 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 51.0 | 3.31e-01 | 89.5% | 19.7% |
| 3915745 | 376.1.1.119 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF26037 | 0.65 | 51.0 | 5.35e-01 | 98.2% | 100.0% |
| 3204200 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 55.0 | 5.26e-01 | 94.7% | 81.5% |
| 3724243 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 55.0 | 4.39e-01 | 94.7% | 62.7% |
| 3229165 | 3167.1.1.1 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e | 0.63 | 54.0 | 4.75e-01 | 100.0% | 78.4% |
| 3739073 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.62 | 52.0 | 4.34e-01 | 94.7% | 76.0% |
| 4833007 | 3167.1.1.1 ↗ | a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e | 0.62 | 53.0 | 4.68e-01 | 100.0% | 76.1% |
| 3186992 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 55.0 | 4.48e-01 | 98.2% | 92.4% |
| 5051511 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.62 | 46.0 | 4.86e-01 | 98.2% | 92.0% |
| 3786228 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 51.0 | 5.03e-01 | 91.2% | 86.7% |
| 4951410 | 376.1.3.96 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › DUF2180 | 0.59 | 47.0 | 4.47e-01 | 87.7% | 76.8% |
| 3825851 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 49.0 | 4.60e-01 | 94.7% | 95.7% |
| 3268166 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.57 | 45.0 | 4.72e-01 | 91.2% | 98.0% |
| 3230544 | 386.1.1.247 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › LIM | 0.57 | 44.0 | 3.46e-01 | 94.7% | 40.0% |
| 3977489 | 377.1.1.117 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF27493 | 0.55 | 43.0 | 4.57e-01 | 98.2% | 100.0% |
| 3684011 | 10.12.1.10 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC,JmjN | 0.51 | 34.0 | 2.56e-01 | 78.9% | 25.0% |
| 4662977 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.50 | 36.0 | 2.62e-01 | 75.4% | 38.7% |