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MG592484.1__AUR88220.1__NVP1111A_26__00026

Bact-Vir

MG592484.1__AUR88220.1__NVP1111A_26__00026

Identity

Accession:
MG592484 ↗
Kingdom:
phage

Quality

91.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.111.A._10N.286.45.E6

TaxID: 1881328

Cluster

View cluster (16 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 29-266
PDB
Domain cluster: rep: IMGVR_UViG_648028040_000001-648028040-648194435__D26-229
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ycsA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 36.0 4.98e-01 78.6% 96.7%
1vm6B01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 38.0 4.92e-01 100.0% 94.8%
2l82A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.64 43.0 5.09e-01 100.0% 98.1%
3qldA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.63 39.0 4.03e-01 100.0% 63.6%
5o1pA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 43.0 4.98e-01 99.2% 96.0%
4jhmA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.62 42.0 4.12e-01 100.0% 62.6%
3ro6A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.62 40.0 4.03e-01 100.0% 62.9%
5temA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.62 40.0 4.87e-01 100.0% 98.1%
4f3yA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.61 40.0 4.79e-01 100.0% 96.9%
1rvkA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.61 44.0 4.28e-01 100.0% 65.9%
1q6oB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 40.0 4.22e-01 100.0% 72.1%
3a9uA02 3.40.50.980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 28.0 3.44e-01 77.3% 66.0%
3ijpB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 39.0 4.72e-01 100.0% 97.5%
4m0xA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.60 40.0 4.04e-01 100.0% 66.4%
2hu8A02 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.60 44.0 4.25e-01 73.9% 95.8%
3qfeB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 38.0 3.50e-01 79.8% 50.0%
2ziuB01 3.40.50.10130 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 35.0 4.24e-01 79.4% 92.6%
3ry7A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.57 46.0 4.27e-01 84.5% 92.4%
3qhaA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 38.0 4.51e-01 94.1% 98.1%
1wx0A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 39.0 4.18e-01 100.0% 78.7%
3qllA00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.57 40.0 4.21e-01 100.0% 79.1%
1tqxA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 38.0 3.95e-01 100.0% 73.3%
2f6uA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.55 36.0 3.69e-01 94.1% 66.2%
2ovlA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.55 40.0 4.11e-01 100.0% 77.4%
3gy1B02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.54 38.0 3.83e-01 100.0% 69.7%
4m8kA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.54 42.0 4.43e-01 80.3% 95.3%
5ywwA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 33.0 3.72e-01 79.4% 77.0%
3pgvB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.54 36.0 4.25e-01 76.1% 98.7%
5uckB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.54 41.0 3.85e-01 100.0% 64.5%
6smyB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 33.0 4.07e-01 81.5% 98.6%
3ijlA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.53 37.0 3.84e-01 97.5% 73.7%
1n7kA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.53 41.0 4.22e-01 99.6% 82.1%
2qjjD02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.53 43.0 4.26e-01 100.0% 82.2%
1nrwA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 34.0 4.11e-01 75.2% 99.4%
4gp6A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 35.0 4.12e-01 78.6% 94.7%
2pgwA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 39.0 4.07e-01 100.0% 82.8%
2iueA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.52 40.0 4.21e-01 79.0% 97.6%
2qxlB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.52 30.0 3.83e-01 81.5% 98.5%
2qdeA02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 39.0 3.96e-01 99.6% 77.4%
2gl5A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.52 44.0 4.26e-01 100.0% 80.2%
5c40B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.51 48.0 4.33e-01 98.3% 97.4%
7e6iA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.51 37.0 4.22e-01 84.5% 100.0%
3qz6A00 3.20.20.60 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains 0.51 39.0 3.85e-01 100.0% 73.7%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3944167 2499.2.1.2 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N 0.96 94.0 8.90e-01 100.0% 89.3%
1518917 2499.2.1.2 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N 0.93 91.0 8.61e-01 100.0% 88.3%
3978226 2499.2.1.1 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 0.92 90.0 8.41e-01 100.0% 89.3%
5004680 2499.2.1.1 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 0.85 83.0 7.82e-01 100.0% 89.1%
4995822 2499.2.1.1 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 0.84 79.0 7.75e-01 100.0% 91.4%
4889792 2499.2.1.0 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 0.83 70.0 7.32e-01 100.0% 94.5%
2832219 2499.2.1.0 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 0.81 79.0 6.65e-01 100.0% 92.5%
2468538 2499.2.1.0 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 0.81 78.0 7.62e-01 100.0% 94.6%
4545050 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.76 28.0 3.43e-01 98.7% 51.6%
4888782 2499.2.1.2 ↗ a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N 0.75 67.0 6.29e-01 92.4% 88.1%
4608197 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.70 39.0 5.10e-01 100.0% 96.3%
None — 0.68 37.0 4.94e-01 100.0% 98.4%
3886962 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.68 35.0 4.39e-01 99.6% 80.0%
4134137 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.66 39.0 4.91e-01 98.3% 94.5%
4181529 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.66 40.0 5.06e-01 100.0% 97.9%
4550929 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.65 40.0 4.89e-01 100.0% 94.7%
4964292 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.65 41.0 5.01e-01 100.0% 97.4%
4177716 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.64 40.0 4.97e-01 100.0% 98.0%
5027790 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.63 41.0 4.94e-01 99.6% 98.7%
3251802 207.1.1.0 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.62 33.0 4.40e-01 99.2% 97.5%
None — 0.62 36.0 4.62e-01 99.6% 98.5%
None — 0.62 40.0 4.75e-01 100.0% 93.9%
4072774 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.61 40.0 4.67e-01 100.0% 92.1%
4179082 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.61 39.0 4.79e-01 100.0% 98.1%
4220040 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.61 38.0 4.68e-01 100.0% 98.0%
4226093 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.61 40.0 4.70e-01 100.0% 94.5%
4176390 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.60 39.0 4.67e-01 100.0% 97.4%
4517679 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.60 41.0 4.73e-01 98.7% 94.7%
4951543 2006.1.2.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases 0.60 39.0 4.24e-01 84.0% 76.9%
4105015 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.60 40.0 4.72e-01 99.6% 95.8%
4993078 2487.1.1.8 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › RraA-like 0.59 38.0 3.15e-01 100.0% 35.6%
4564497 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.59 39.0 4.58e-01 100.0% 95.2%
4526094 323.1.1.0 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.58 28.0 3.09e-01 77.3% 54.2%
4993221 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.58 41.0 4.69e-01 100.0% 98.3%
4930438 2003.1.1.12 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DapB_N 0.58 40.0 4.63e-01 90.3% 97.6%
None — 0.56 40.0 3.45e-01 100.0% 46.7%
4995877 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.56 33.0 3.61e-01 84.0% 69.2%
None — 0.56 46.0 4.32e-01 85.3% 93.2%
3198155 2002.1.1.15 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Trp_syntA 0.56 38.0 4.24e-01 100.0% 86.8%
5019444 2006.1.2.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases › DHH 0.55 38.0 3.66e-01 86.6% 60.4%
3736335 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.54 50.0 4.38e-01 98.3% 97.7%
3416838 7561.1.1.1 ↗ a/b three-layered sandwiches › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase-like hydrolases › Isochorismatase 0.54 41.0 4.42e-01 92.0% 93.5%
None — 0.53 40.0 3.26e-01 100.0% 42.6%
4955792 2002.1.1.174 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MR_MLE_C 0.53 40.0 4.03e-01 100.0% 77.0%
4931922 2002.1.1.441 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › RraA-like 0.53 39.0 3.21e-01 97.5% 41.7%
4989583 2003.1.9.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins 0.53 41.0 4.28e-01 79.0% 90.9%
5011300 2002.1.1.9 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.53 39.0 4.01e-01 97.5% 77.6%
5033926 2002.1.1.9 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › OMPdecase 0.53 39.0 3.93e-01 97.5% 74.5%
4956909 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.52 42.0 3.92e-01 83.6% 99.0%
5057760 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.52 48.0 4.45e-01 98.7% 99.0%
5004885 2003.6.1.4 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › ADP_PFK_GK 0.52 48.0 3.88e-01 99.6% 97.3%
1125559 2007.5.1.12 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_lke 0.52 42.0 4.49e-01 100.0% 97.6%
3935967 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.51 48.0 4.34e-01 98.7% 97.4%
3709683 2003.1.1.39 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Sacchrp_dh_NADP 0.50 46.0 3.89e-01 97.9% 96.9%
4308211 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.50 42.0 3.36e-01 87.0% 86.7%
5032394 2004.1.1.208 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 0.50 38.0 4.11e-01 94.5% 92.0%
D2 medium residues 301-378
PDB
Domain cluster: rep: MG711460.1__AUV61548.1__X__00036__D405-468
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fb0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.74 45.0 4.28e-01 74.4% 51.1%
3e8oB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 45.0 4.12e-01 74.4% 48.0%
2be3B01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.71 50.0 4.16e-01 73.1% 48.9%
2nraC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 46.0 4.18e-01 70.5% 50.0%
3fgvA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 42.0 4.00e-01 74.4% 50.5%
6fgjA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.66 48.0 3.92e-01 78.2% 58.7%
4xq7A01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.65 47.0 3.75e-01 76.9% 42.9%
2od6C00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 43.0 3.90e-01 74.4% 50.5%
3tufA00 1.10.287.4300 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like 0.63 40.0 3.48e-01 76.9% 43.5%
4p4mA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.62 44.0 3.83e-01 74.4% 49.6%
2ymvA02 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.62 44.0 3.20e-01 75.6% 29.0%
1rjjA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 39.0 3.54e-01 74.4% 45.9%
7x4qA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.61 43.0 3.55e-01 75.6% 47.7%
5t0oA03 3.30.70.1320 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like 0.59 39.0 3.64e-01 74.4% 52.5%
5xzqF00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 40.0 3.72e-01 74.4% 54.4%
2b4vA02 3.30.460.50 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.59 41.0 3.63e-01 74.4% 52.1%
1tr0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 41.0 3.70e-01 74.4% 53.8%
4oycB00 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.57 40.0 3.85e-01 76.9% 65.2%
1av5A00 3.30.428.10 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like 0.53 35.0 3.21e-01 71.8% 47.8%
3mgjA00 3.30.70.2690 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › LOR/SDH bifunctional enzyme, conserved domain 0.51 36.0 3.41e-01 74.4% 86.5%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3980756 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.94 81.0 7.19e-01 89.7% 67.6%
3949098 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.90 85.0 7.42e-01 100.0% 70.9%
2471639 283.2.1.0 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like 0.89 80.0 6.94e-01 94.9% 72.1%
2468488 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.86 74.0 6.48e-01 91.0% 71.2%
4957559 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.85 69.0 6.24e-01 84.6% 72.0%
2468539 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.85 77.0 6.64e-01 96.2% 72.2%
1518918 283.2.1.2 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › Phage_sheath_1C 0.79 72.0 6.30e-01 98.7% 70.5%
4433785 283.2.1.4 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GP46 0.77 50.0 4.15e-01 73.1% 39.2%
4126752 304.20.1.5 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain › tRNA_synt_2f 0.69 44.0 3.13e-01 74.4% 22.7%
3787852 3121.1.1.0 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain 0.67 47.0 4.11e-01 74.4% 75.0%
3973305 304.4.1.20 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 0.64 36.0 3.17e-01 71.8% 36.8%
4898995 3121.1.1.1 ↗ a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA 0.64 42.0 4.05e-01 75.6% 58.9%
3365648 304.20.1.0 ↗ a+b two layers › Alpha-beta plaits › PAP/Archaeal CCA-adding enzyme, C-terminal domain › PAP/Archaeal CCA-adding enzyme, C-terminal domain 0.63 44.0 3.87e-01 76.9% 49.6%
5073695 512.1.1.1 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st 0.63 45.0 4.12e-01 74.4% 91.0%
4021691 4010.1.1.2 ↗ a+b complex topology › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › N-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 0.62 45.0 2.92e-01 76.9% 35.6%
4962639 283.3.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › MK0786-like › MK0786-like › DHNA 0.61 44.0 4.03e-01 76.9% 60.2%
1288930 304.114.1.0 ↗ a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.61 40.0 3.64e-01 73.1% 51.5%
3962099 304.4.1.0 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.60 42.0 3.89e-01 74.4% 55.2%
3596800 883.1.1.0 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like 0.60 43.0 3.24e-01 75.6% 39.2%
4145584 3016.1.1.11 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA 0.59 41.0 3.71e-01 74.4% 53.3%
3839413 2008.1.1.34 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Card1_endonuc 0.59 40.0 3.22e-01 70.5% 41.4%
4416332 327.3.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain › GMP_synt_C 0.58 40.0 3.15e-01 70.5% 77.6%
1935446 327.13.1.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › YscJ_FliF 0.58 42.0 3.67e-01 76.9% 53.3%
3707938 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.58 40.0 3.61e-01 73.1% 49.6%
4028322 304.51.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related 0.58 39.0 3.26e-01 70.5% 81.4%
3999731 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.57 40.0 3.34e-01 74.4% 45.7%
4019303 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.57 39.0 2.75e-01 71.8% 64.9%
4146827 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.56 40.0 3.33e-01 76.9% 42.1%
2907089 283.2.1.1 ↗ a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › gpW/gp25-like › gpW/gp25-like › GPW_gp25 0.56 40.0 3.58e-01 76.9% 52.7%
4945121 312.1.1.0 ↗ a+b three layers › HIT-like › HIT-related › HIT-related 0.56 40.0 3.34e-01 76.9% 49.7%
4336680 3016.1.1.11 ↗ a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › SelA 0.56 40.0 3.52e-01 76.9% 93.3%
4869876 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.55 38.0 3.71e-01 74.4% 65.1%
4989326 304.103.1.0 ↗ a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like 0.55 39.0 3.17e-01 76.9% 37.4%
3714496 316.1.1.0 ↗ a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase 0.54 40.0 3.03e-01 78.2% 38.6%
3712536 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.53 39.0 2.59e-01 79.5% 63.2%
3200673 616.1.1.0 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.52 36.0 3.40e-01 71.8% 91.6%
3552400 101.1.2.566 ↗ alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.52 35.0 2.33e-01 70.5% 29.3%
3367557 4099.1.1.41 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › FmiP_Thoc5 0.50 35.0 3.04e-01 74.4% 44.4%