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MG592486.1__AUR88344.1__NVP1112O_26__00026
Bact-VirMG592486.1__AUR88344.1__NVP1112O_26__00026
Identity
- Accession:
- MG592486 ↗
- Kingdom:
- phage
Quality
77.3
mean pLDDT
Taxonomy
TaxID: 1881330
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-100
Domain cluster:
rep: KF147891.1__QKE11213.1__PaBG_00148__00148__D7-109
D2
high
residues 197-283
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ptfB02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.74 | 38.0 | 4.67e-01 | 82.8% | 77.2% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 50.0 | 4.77e-01 | 96.6% | 65.7% |
| 4dciA00 | 6.10.140.1110 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 51.0 | 4.24e-01 | 80.5% | 46.3% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 47.0 | 4.81e-01 | 73.6% | 87.1% |
| 1e6dM01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.66 | 50.0 | 4.25e-01 | 80.5% | 79.7% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 51.0 | 4.83e-01 | 89.7% | 69.5% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.64 | 43.0 | 4.19e-01 | 81.6% | 61.9% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.62 | 49.0 | 4.75e-01 | 83.9% | 93.8% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 46.0 | 4.29e-01 | 80.5% | 89.9% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 45.0 | 4.37e-01 | 78.2% | 79.2% |
| 2rd0B00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 47.0 | 3.98e-01 | 82.8% | 55.4% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.60 | 50.0 | 4.45e-01 | 90.8% | 71.2% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 4.86e-01 | 78.2% | 100.0% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.60 | 43.0 | 4.48e-01 | 74.7% | 92.5% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.60 | 38.0 | 3.92e-01 | 82.8% | 65.9% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 46.0 | 4.83e-01 | 82.8% | 93.8% |
| 1vx7301 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 41.0 | 4.42e-01 | 83.9% | 85.1% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.59 | 42.0 | 4.68e-01 | 79.3% | 97.0% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.59 | 46.0 | 4.32e-01 | 81.6% | 79.6% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.59 | 50.0 | 4.36e-01 | 95.4% | 61.7% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 40.0 | 4.73e-01 | 89.7% | 100.0% |
| 4q5nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 43.0 | 3.99e-01 | 80.5% | 60.7% |
| 1pn9B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.57 | 42.0 | 3.68e-01 | 79.3% | 51.5% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.57 | 36.0 | 3.80e-01 | 78.2% | 70.4% |
| 2v6yA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 34.0 | 3.69e-01 | 87.4% | 72.0% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 44.0 | 4.40e-01 | 83.9% | 97.7% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.55 | 42.0 | 4.17e-01 | 81.6% | 80.0% |
| 6h9xA01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.55 | 43.0 | 4.11e-01 | 87.4% | 72.5% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.55 | 41.0 | 4.32e-01 | 80.5% | 92.3% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.54 | 40.0 | 3.88e-01 | 79.3% | 100.0% |
| 2pejA00 | 1.10.1200.210 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Chaperonin-like RbcX | 0.52 | 42.0 | 3.96e-01 | 89.7% | 80.7% |
| 3tahA02 | 1.10.287.1770 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 45.0 | 4.54e-01 | 96.6% | 96.6% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3388013 | 1075.4.1.7 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › SbmA_BacA | 0.66 | 50.0 | 3.27e-01 | 79.3% | 64.1% |
| 4564044 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.65 | 46.0 | 3.29e-01 | 77.0% | 24.6% |
| 4061849 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.65 | 50.0 | 4.62e-01 | 85.1% | 64.5% |
| 4237056 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.64 | 48.0 | 4.08e-01 | 78.2% | 50.0% |
| 3789529 | 604.12.1.4 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT1 | 0.64 | 53.0 | 4.60e-01 | 88.5% | 83.1% |
| 3398929 | 5041.1.1.32 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › TMEM141 | 0.64 | 45.0 | 4.50e-01 | 73.6% | 91.1% |
| 3615973 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.64 | 51.0 | 4.64e-01 | 85.1% | 89.6% |
| 4556484 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.63 | 50.0 | 4.38e-01 | 83.9% | 66.4% |
| 3980428 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.63 | 43.0 | 4.60e-01 | 82.8% | 82.7% |
| 3543713 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 47.0 | 4.66e-01 | 81.6% | 76.7% |
| 4175684 | 3291.1.1.232 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Paralemmin | 0.62 | 48.0 | 4.15e-01 | 81.6% | 81.5% |
| 3277724 | 150.5.1.1 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › WXG100 | 0.62 | 47.0 | 4.59e-01 | 80.5% | 77.9% |
| 3339772 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.61 | 47.0 | 4.01e-01 | 82.8% | 68.6% |
| 4806319 | 3755.1.1.2 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › YscO-like | 0.61 | 48.0 | 4.91e-01 | 83.9% | 86.7% |
| 5005807 | 2003.1.1.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Shikimate_DH | 0.60 | 44.0 | 3.14e-01 | 77.0% | 25.3% |
| 3461932 | 3922.1.1.189 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DUF630 | 0.60 | 46.0 | 4.45e-01 | 80.5% | 85.3% |
| 3240117 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.60 | 46.0 | 4.63e-01 | 82.8% | 94.4% |
| 3611163 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.59 | 50.0 | 3.16e-01 | 92.0% | 31.9% |
| 3883768 | 5086.1.1.101 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › SH3BP5 | 0.59 | 46.0 | 4.10e-01 | 83.9% | 80.0% |
| 3971758 | 5086.1.1.84 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND | 0.58 | 44.0 | 4.45e-01 | 80.5% | 98.8% |
| 4045132 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.57 | 42.0 | 3.88e-01 | 77.0% | 94.5% |
| 3960783 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.57 | 44.0 | 4.54e-01 | 82.8% | 91.3% |
| 5025813 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.55 | 46.0 | 4.26e-01 | 90.8% | 79.1% |
| 4335871 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.55 | 45.0 | 4.23e-01 | 95.4% | 72.7% |
| 3600869 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.55 | 45.0 | 4.15e-01 | 90.8% | 91.3% |
| 4136919 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.54 | 44.0 | 3.47e-01 | 88.5% | 96.8% |
| 3255249 | 3939.1.1.0 ↗ | alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain | 0.54 | 45.0 | 3.90e-01 | 92.0% | 77.0% |
D3
high
residues 321-438
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.80 | 50.0 | 5.47e-01 | 72.9% | 75.5% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.78 | 54.0 | 6.34e-01 | 73.7% | 97.7% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.76 | 48.0 | 4.20e-01 | 94.9% | 43.9% |
| 2v0xA01 | 1.10.287.3160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 58.0 | 5.12e-01 | 80.5% | 72.0% |
| 1r0dA00 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.72 | 51.0 | 4.27e-01 | 72.9% | 45.1% |
| 2oduA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 50.0 | 5.29e-01 | 79.7% | 81.0% |
| 3k66A01 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.72 | 66.0 | 5.39e-01 | 100.0% | 78.9% |
| 2hh7A00 | 1.20.58.1000 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer | 0.72 | 47.0 | 5.52e-01 | 70.3% | 92.9% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.71 | 62.0 | 5.50e-01 | 92.4% | 90.2% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.71 | 49.0 | 5.52e-01 | 98.3% | 91.2% |
| 4j05A00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.71 | 49.0 | 3.32e-01 | 91.5% | 19.9% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.71 | 56.0 | 5.22e-01 | 83.9% | 67.6% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 61.0 | 4.89e-01 | 93.2% | 78.8% |
| 7cfmR01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.67 | 52.0 | 4.03e-01 | 82.2% | 76.0% |
| 4in3B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 50.0 | 3.21e-01 | 100.0% | 16.3% |
| 3e6sA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.65 | 52.0 | 4.68e-01 | 84.7% | 83.0% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.64 | 53.0 | 4.44e-01 | 85.6% | 83.4% |
| 1br0A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 48.0 | 4.78e-01 | 79.7% | 82.5% |
| 1ciyA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.63 | 58.0 | 4.67e-01 | 100.0% | 67.4% |
| 7qx4A01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.62 | 57.0 | 4.52e-01 | 100.0% | 60.3% |
| 8e9gK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 39.0 | 4.34e-01 | 81.4% | 81.3% |
| 1dlcA01 | 1.20.190.10 | Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain | 0.62 | 57.0 | 4.55e-01 | 100.0% | 66.8% |
| 4ip8A00 | 1.10.132.110 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein | 0.60 | 37.0 | 3.85e-01 | 93.2% | 66.7% |
| 3rc3A05 | 1.20.58.1080 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 46.0 | 4.68e-01 | 86.4% | 85.8% |
| 2b7mA00 | 1.20.1280.170 | Mainly Alpha › Up-down Bundle › Monooxygenase › Exocyst complex component Exo70 | 0.57 | 52.0 | 3.42e-01 | 100.0% | 27.5% |
| 1fx8A00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.57 | 40.0 | 3.10e-01 | 72.9% | 33.5% |
| 4wqoD00 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.55 | 48.0 | 4.57e-01 | 100.0% | 81.6% |
| 2ehwA00 | 6.10.140.1220 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 44.0 | 4.48e-01 | 84.7% | 90.4% |
| 5ymrC00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.54 | 46.0 | 2.80e-01 | 94.1% | 62.0% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4061849 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.85 | 56.0 | 5.86e-01 | 70.3% | 71.8% |
| 3339157 | 3755.3.1.370 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF632 | 0.82 | 54.0 | 5.58e-01 | 71.2% | 71.8% |
| 3932692 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.80 | 58.0 | 6.61e-01 | 83.9% | 96.7% |
| 3705783 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.79 | 57.0 | 6.49e-01 | 84.7% | 96.7% |
| 3940557 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.75 | 63.0 | 6.14e-01 | 89.0% | 97.7% |
| 3390311 | 604.7.1.0 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A | 0.75 | 58.0 | 6.04e-01 | 80.5% | 96.4% |
| 3612625 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 63.0 | 5.16e-01 | 89.8% | 56.9% |
| 3720243 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.74 | 68.0 | 5.15e-01 | 99.2% | 68.7% |
| 3738569 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.74 | 56.0 | 5.93e-01 | 79.7% | 97.1% |
| 3939162 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.73 | 56.0 | 5.60e-01 | 83.9% | 78.3% |
| 3727790 | 5001.1.1.39 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › RTA1 | 0.72 | 61.0 | 4.58e-01 | 88.1% | 40.4% |
| 3605626 | 192.12.1.0 ↗ | alpha bundles › Long alpha-hairpin › Transcriptional repressor TraM › Transcriptional repressor TraM | 0.72 | 57.0 | 6.11e-01 | 89.0% | 93.3% |
| 3740611 | 109.62.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › AFF4 C-terminal homology domain › AFF4 C-terminal homology domain › Ebp1_C | 0.71 | 66.0 | 5.16e-01 | 98.3% | 66.5% |
| 3646784 | 109.4.1.1407 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG, SCD, HEAT_SCC3-SA | 0.70 | 65.0 | 4.11e-01 | 97.5% | 28.4% |
| 3479966 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.69 | 59.0 | 5.70e-01 | 94.1% | 82.3% |
| 3716333 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.69 | 60.0 | 4.91e-01 | 94.1% | 82.3% |
| 3372307 | 109.4.1.67 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RINT1_TIP1 | 0.69 | 62.0 | 3.78e-01 | 100.0% | 21.4% |
| 3738219 | 603.1.1.97 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin, SNARE | 0.69 | 64.0 | 5.16e-01 | 100.0% | 89.3% |
| 5041952 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.69 | 59.0 | 5.64e-01 | 94.9% | 80.7% |
| 3609374 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.69 | 53.0 | 5.52e-01 | 85.6% | 87.3% |
| 3788222 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.68 | 55.0 | 3.93e-01 | 85.6% | 67.1% |
| 3214036 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.67 | 59.0 | 4.22e-01 | 93.2% | 53.8% |
| 3725031 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 61.0 | 5.53e-01 | 100.0% | 96.9% |
| 3834159 | 603.1.1.17 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › SNARE | 0.66 | 51.0 | 4.43e-01 | 81.4% | 75.6% |
| 3227805 | 5001.1.1.63 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srab | 0.66 | 54.0 | 3.95e-01 | 87.3% | 51.9% |
| 3834594 | 601.27.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › MW0975(SA0943)-like › MW0975(SA0943)-like › DUF632, DUF630 | 0.65 | 56.0 | 5.09e-01 | 91.5% | 83.2% |
| 3444505 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.64 | 57.0 | 4.74e-01 | 100.0% | 82.8% |
| 3493397 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.63 | 54.0 | 4.65e-01 | 93.2% | 73.2% |
| 3640629 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.63 | 57.0 | 4.98e-01 | 97.5% | 69.4% |
| 3937209 | 5001.1.1.27 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre | 0.62 | 55.0 | 4.16e-01 | 94.1% | 70.4% |
| 3169487 | 109.4.1.309 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Med12 | 0.57 | 52.0 | 3.03e-01 | 100.0% | 14.6% |
| 5044316 | 1075.1.1.68 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC_tran_2 | 0.52 | 42.0 | 3.21e-01 | 89.0% | 77.6% |
D4
medium
residues 115-186
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vcxA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.64 | 25.0 | 2.88e-01 | 84.7% | 41.5% |
| 3itwA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.63 | 25.0 | 2.86e-01 | 84.7% | 42.9% |
| 7kggC02 | 3.30.2090.10 | Alpha Beta › 2-Layer Sandwich › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains › Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains | 0.58 | 40.0 | 3.71e-01 | 97.2% | 56.5% |
| 2z2mD01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.54 | 31.0 | 3.30e-01 | 90.3% | 64.4% |