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MG592495.1__AUR89229.1__NVP1121O_201__00201

Bact-Vir

MG592495.1__AUR89229.1__NVP1121O_201__00201

Identity

Accession:
MG592495 ↗
Kingdom:
phage

Quality

81.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 37-87
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fwxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 51.0 2.91e-01 72.5% 95.7%
2cnxA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.73 50.0 3.04e-01 72.5% 19.6%
6m90A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.72 51.0 3.10e-01 74.5% 20.0%
3bpvA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 47.0 3.37e-01 90.2% 24.8%
4cc9A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.72 50.0 3.01e-01 72.5% 18.9%
3cxgA00 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.71 50.0 3.85e-01 76.5% 73.0%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.70 54.0 5.29e-01 86.3% 77.2%
2lg1A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 58.0 4.59e-01 98.0% 47.8%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 60.0 4.74e-01 100.0% 47.2%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 47.0 4.30e-01 72.5% 75.4%
1pzxA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.68 56.0 4.38e-01 100.0% 95.9%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 49.0 4.15e-01 88.2% 46.6%
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.66 47.0 5.18e-01 82.4% 100.0%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 58.0 4.84e-01 98.0% 58.4%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.66 46.0 3.40e-01 74.5% 68.4%
2dlxA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.65 51.0 4.02e-01 88.2% 85.0%
6g1nD01 3.30.160.250 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.65 57.0 4.78e-01 96.1% 59.0%
4qdgA02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 47.0 3.48e-01 80.4% 71.9%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 47.0 2.85e-01 78.4% 22.1%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 43.0 4.00e-01 72.5% 73.4%
2gtiA01 3.30.160.820 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Nsp15 N-terminal domain-like 0.61 42.0 3.94e-01 72.5% 57.8%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.61 47.0 3.93e-01 88.2% 59.2%
1nrkA01 3.30.70.1630 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 45.0 3.74e-01 82.4% 77.3%
1mgpA02 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.61 50.0 3.96e-01 100.0% 95.0%
3a54A01 2.40.50.340 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 49.0 4.25e-01 100.0% 81.1%
1p4xA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 54.0 4.03e-01 100.0% 69.3%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.60 49.0 4.09e-01 100.0% 50.5%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 53.0 3.76e-01 96.1% 57.4%
4s1hA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.58 50.0 3.09e-01 94.1% 87.5%
5i47B03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.58 36.0 2.99e-01 100.0% 33.7%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 50.0 3.56e-01 92.2% 93.4%
2i99A01 3.30.1780.10 Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 0.58 46.0 3.27e-01 86.3% 85.3%
3ip3A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.57 49.0 3.20e-01 94.1% 68.5%
1wv8A00 3.30.2390.10 Alpha Beta › 2-Layer Sandwich › TTHA1013/TTHA0281-like › TTHA1013-like 0.56 47.0 4.33e-01 100.0% 73.2%
4joiA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 44.0 3.43e-01 98.0% 74.5%
2gumB03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.56 49.0 3.78e-01 100.0% 86.0%
4p6zM01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.56 48.0 3.72e-01 100.0% 74.4%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 44.0 2.80e-01 94.1% 91.1%
2a3vA02 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.56 49.0 3.22e-01 98.0% 26.1%
3dcdA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.56 40.0 2.54e-01 80.4% 30.1%
2bv6A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 43.0 3.10e-01 84.3% 75.7%
1tmoA03 3.90.55.10 Alpha Beta › Alpha-Beta Complex › Dimethylsulfoxide Reductase; domain 3 › Dimethylsulfoxide Reductase, domain 3 0.54 43.0 3.61e-01 86.3% 76.7%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 3.77e-01 100.0% 57.3%
1p4xA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 48.0 3.64e-01 100.0% 69.1%
8agaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 45.0 3.45e-01 100.0% 71.4%
4pdyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 39.0 3.13e-01 78.4% 60.6%
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 45.0 3.94e-01 98.0% 83.1%
3tc9A02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 35.0 2.24e-01 74.5% 20.4%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 40.0 3.33e-01 92.2% 89.9%
2g7hA01 3.30.160.460 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 40.0 3.49e-01 86.3% 71.1%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4992470 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.78 62.0 5.89e-01 92.2% 73.3%
5058682 2004.1.1.162 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Rad51 0.76 54.0 3.47e-01 74.5% 45.0%
5022340 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.75 53.0 4.84e-01 76.5% 60.0%
4946414 301.13.1.0 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain 0.75 65.0 4.91e-01 100.0% 56.9%
4817067 5.1.4.323 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_1st 0.74 50.0 3.38e-01 70.6% 34.3%
4947834 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.74 57.0 4.49e-01 86.3% 41.0%
4119222 375.1.1.135 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Lar_restr_allev 0.73 47.0 4.82e-01 72.5% 68.0%
4995200 3407.1.1.2 mixed a+b and a/b › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop5_56-rel_N_Arc 0.72 51.0 3.96e-01 76.5% 51.3%
3882796 1021.1.1.2 a+b two layers › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › C-terminal domain in RNA helicases › RNA_hel_CTD 0.72 57.0 4.99e-01 96.1% 56.5%
4912068 5.1.4.359 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Utp12, ANAPC4_WD40 0.72 49.0 2.94e-01 72.5% 17.2%
4025061 5.1.4.263 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_2nd 0.72 49.0 2.90e-01 72.5% 15.6%
3390648 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.71 63.0 4.74e-01 98.0% 42.5%
3400449 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 57.0 4.03e-01 96.1% 27.4%
3582821 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.71 61.0 5.12e-01 98.0% 61.1%
3480535 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 59.0 4.71e-01 98.0% 46.7%
4322675 220.1.1.121 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.70 60.0 4.66e-01 96.1% 46.4%
5077254 2004.1.1.42 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.70 55.0 3.15e-01 100.0% 9.1%
3920678 5.1.5.41 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_2 0.69 47.0 2.79e-01 70.6% 17.2%
4823114 5.1.4.265 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_1st 0.69 47.0 3.43e-01 72.5% 42.6%
3576634 5.1.2.31 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BING4CT 0.69 47.0 3.33e-01 70.6% 39.3%
3947081 4210.1.1.0 a+b two layers › WGR domain › WGR domain › WGR domain 0.69 58.0 5.41e-01 98.0% 76.6%
5000262 5.1.11.43 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_CGLA 0.69 48.0 2.81e-01 72.5% 14.9%
3198727 220.1.1.121 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.68 61.0 4.61e-01 100.0% 43.3%
4565886 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 55.0 4.11e-01 94.1% 52.2%
4967355 4100.1.1.3 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox 0.67 58.0 5.38e-01 98.0% 76.9%
4385221 3943.1.1.0 beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains 0.66 50.0 3.84e-01 82.4% 51.3%
3203646 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.63 51.0 3.17e-01 86.3% 18.4%
4665972 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.62 56.0 3.34e-01 100.0% 20.8%
4949985 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 47.0 4.09e-01 88.2% 53.8%
4029125 5.1.4.21 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.61 53.0 3.22e-01 100.0% 20.6%
3299579 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.61 52.0 4.68e-01 96.1% 77.1%
4929701 4100.1.1.0 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like 0.61 52.0 4.99e-01 98.0% 81.7%
4982318 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.61 54.0 5.07e-01 96.1% 100.0%
3927286 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.60 43.0 3.87e-01 78.4% 96.0%
5026901 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 44.0 4.17e-01 78.4% 70.0%
3705528 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.59 45.0 3.25e-01 82.4% 69.7%
3896583 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.59 50.0 3.35e-01 90.2% 26.3%
4149829 220.1.1.114 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF5673 0.58 40.0 3.65e-01 74.5% 50.7%
3275056 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.58 40.0 2.76e-01 74.5% 30.4%
4989457 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 39.0 3.94e-01 72.5% 72.0%
5015133 4100.1.1.9 a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › DUF7387 0.58 50.0 4.77e-01 98.0% 80.0%
4959043 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.58 50.0 3.67e-01 96.1% 37.7%
3781230 1013.1.1.1 beta duplicates or obligate multimers › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › WD repeat-containing protein 48 ancillary domain › DUF3337 0.57 45.0 3.14e-01 100.0% 23.3%
3602759 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 40.0 3.92e-01 84.3% 65.0%
4201017 101.1.2.15 alpha arrays › HTH › HTH › winged helix domain › MarR 0.57 50.0 3.49e-01 98.0% 81.9%
5066484 2484.1.1.333 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1464 0.55 50.0 3.27e-01 100.0% 46.5%
2790593 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.55 46.0 3.42e-01 100.0% 58.5%
3175626 331.1.1.13 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › CPSF73-100_C 0.53 44.0 3.85e-01 90.2% 88.0%
4944397 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 37.0 3.80e-01 78.4% 82.0%
4935681 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 34.0 3.41e-01 74.5% 65.5%
3995278 282.1.1.0 a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain 0.51 36.0 2.77e-01 76.5% 53.8%
3393233 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.50 41.0 2.67e-01 100.0% 65.7%