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MG592496.1__AUR89327.1__NVP1122A_36__00036

Bact-Vir

MG592496.1__AUR89327.1__NVP1122A_36__00036

Identity

Accession:
MG592496 ↗
Kingdom:
phage

Quality

77.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.122.A._10N.286.46.F8

TaxID: 1881249

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-75
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m1cB01 3.30.390.170 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.66 53.0 4.77e-01 93.2% 69.7%
5wb2B00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 47.0 4.75e-01 80.8% 75.3%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 47.0 4.44e-01 82.2% 61.5%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 48.0 4.24e-01 79.5% 65.5%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 46.0 4.26e-01 78.1% 99.0%
4tvcA01 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.62 42.0 3.12e-01 71.2% 48.4%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.60 38.0 4.27e-01 79.5% 87.0%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 44.0 4.47e-01 86.3% 79.5%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 52.0 3.88e-01 98.6% 74.9%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 51.0 4.76e-01 100.0% 82.8%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 38.0 4.05e-01 76.7% 77.8%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 42.0 4.23e-01 79.5% 80.5%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.58 42.0 4.27e-01 78.1% 95.8%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 4.31e-01 94.5% 90.2%
3ab1B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 48.0 3.54e-01 97.3% 85.4%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 40.0 4.22e-01 78.1% 88.7%
2l73A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 42.0 3.48e-01 83.6% 62.2%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 40.0 3.87e-01 75.3% 96.3%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 36.0 3.90e-01 72.6% 82.8%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.55 39.0 3.95e-01 76.7% 77.5%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 37.0 4.11e-01 75.3% 94.4%
4bbyA02 3.30.160.650 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.53 31.0 3.88e-01 75.3% 97.7%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 39.0 3.92e-01 78.1% 79.2%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.52 47.0 2.87e-01 100.0% 87.9%
3dsoA00 2.40.10.300 Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K 0.51 34.0 3.53e-01 78.1% 74.2%
2k49A00 2.30.29.80 Mainly Beta › Roll › PH-domain like › 0.51 36.0 3.20e-01 75.3% 82.2%
2ls0101 2.40.50.670 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Target recognition domain of lytic exoenzyme 0.51 37.0 3.24e-01 90.4% 50.0%
4a2lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 40.0 2.63e-01 84.9% 87.4%
3ottB02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 44.0 2.92e-01 98.6% 93.7%
1nijA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 36.0 2.74e-01 78.1% 88.6%
1gd5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.50 37.0 3.21e-01 83.6% 72.3%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973145 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.89 61.0 6.93e-01 71.2% 94.5%
4278911 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.88 56.0 6.62e-01 89.0% 94.0%
4032637 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.88 61.0 6.93e-01 87.7% 94.5%
3990001 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.88 60.0 7.02e-01 87.7% 98.1%
4112791 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.85 54.0 6.38e-01 89.0% 94.0%
4172704 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.84 58.0 6.55e-01 86.3% 94.5%
4424609 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.78 53.0 6.10e-01 76.7% 98.1%
5060461 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 53.0 5.30e-01 82.2% 86.7%
3797728 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 51.0 4.85e-01 79.5% 77.6%
3262203 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 50.0 3.96e-01 79.5% 60.0%
4065466 220.1.1.150 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 0.67 48.0 4.68e-01 76.7% 68.8%
4001872 220.1.1.123 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.66 49.0 3.65e-01 79.5% 37.8%
3256547 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 48.0 4.35e-01 78.1% 71.0%
319225 1170.1.1.1 ↗ beta barrels › IL8-related › IL8-related › IL8 › IL8 0.66 46.0 4.65e-01 80.8% 73.0%
3211867 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 51.0 4.48e-01 84.9% 70.0%
4034336 4.8.1.13 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › ComK 0.66 48.0 3.86e-01 78.1% 42.8%
3930846 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 50.0 5.16e-01 94.5% 87.1%
4944386 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 48.0 4.24e-01 79.5% 82.7%
3268089 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 48.0 4.07e-01 79.5% 59.2%
3493556 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 48.0 4.25e-01 79.5% 59.1%
3547186 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 48.0 4.06e-01 79.5% 51.2%
4679015 220.1.1.150 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF986 0.65 48.0 4.68e-01 79.5% 95.0%
3247727 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 48.0 3.92e-01 79.5% 69.3%
5051533 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 56.0 4.98e-01 100.0% 83.6%
4960280 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 46.0 4.29e-01 76.7% 64.2%
3513810 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 48.0 3.93e-01 79.5% 48.9%
3478704 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 47.0 4.93e-01 76.7% 90.8%
3941152 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 47.0 4.91e-01 89.0% 87.7%
3417244 220.1.1.64 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C1_MyoVII 0.64 47.0 4.39e-01 80.8% 68.4%
3264236 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.63 47.0 4.28e-01 79.5% 66.0%
3627627 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.63 53.0 4.41e-01 100.0% 82.1%
3247329 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.62 46.0 4.06e-01 79.5% 60.9%
3939128 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 46.0 4.09e-01 80.8% 60.0%
3727172 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 45.0 4.65e-01 78.1% 91.4%
3487901 4263.2.1.0 ↗ a+b two layers › TTHA1528-like › FtsH Periplasmic Domain › FtsH Periplasmic Domain 0.62 50.0 5.05e-01 91.8% 96.0%
4979972 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 53.0 4.40e-01 100.0% 65.9%
3911252 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 44.0 4.14e-01 79.5% 73.7%
5016434 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 42.0 4.25e-01 76.7% 100.0%
3258360 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 50.0 4.52e-01 95.9% 89.5%
3250440 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 45.0 3.81e-01 84.9% 88.1%
4929228 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.60 46.0 4.17e-01 83.6% 73.7%
3581945 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.59 42.0 4.49e-01 76.7% 100.0%
3573585 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 39.0 4.42e-01 82.2% 94.4%
3887127 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 50.0 4.34e-01 100.0% 70.0%
4018977 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 4.23e-01 100.0% 73.6%
4027502 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 39.0 4.08e-01 74.0% 78.5%
3920767 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 4.54e-01 100.0% 78.0%
3441142 4.8.1.7 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SAWADEE 0.58 40.0 4.42e-01 76.7% 98.2%
3713834 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 43.0 3.82e-01 82.2% 70.9%
5048974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 44.0 3.89e-01 84.9% 59.1%
3786664 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.56 37.0 4.16e-01 87.7% 100.0%
3179178 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.56 48.0 3.24e-01 98.6% 78.0%
4982354 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.56 40.0 4.17e-01 82.2% 87.7%
3291448 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 36.0 3.40e-01 78.1% 54.4%
5062120 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.55 43.0 3.90e-01 89.0% 74.3%
3906078 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 4.30e-01 100.0% 84.0%
3869436 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 47.0 4.31e-01 100.0% 82.0%
4180524 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.54 46.0 3.07e-01 98.6% 28.4%
3212095 4205.1.1.7 ↗ a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › HPF1 0.54 37.0 2.95e-01 71.2% 82.6%
2464247 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.54 42.0 4.42e-01 87.7% 93.9%
4952930 2.21.1.0 ↗ beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) 0.54 42.0 4.01e-01 95.9% 72.9%
3939412 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 46.0 4.31e-01 100.0% 86.3%
4034031 4056.1.1.0 ↗ beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.53 41.0 4.28e-01 89.0% 95.4%
3517758 2.1.1.106 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB 0.53 37.0 3.61e-01 72.6% 85.0%
3267508 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 45.0 4.14e-01 100.0% 82.0%
4605602 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 36.0 3.80e-01 78.1% 84.6%
3559703 101.1.8.12 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3504 0.52 38.0 3.11e-01 82.2% 48.1%
2754408 2008.1.1.0 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like 0.52 35.0 3.07e-01 71.2% 75.6%