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MG592499.1__AUR89516.1__NVP1124O_15__00015

Bact-Vir

MG592499.1__AUR89516.1__NVP1124O_15__00015

Identity

Accession:
MG592499 ↗
Kingdom:
phage

Quality

73.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.124.O._10N.286.49.B1

TaxID: 1881384

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-49
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3w6bB00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.78 53.0 3.56e-01 72.1% 27.5%
3d01E00 3.30.1330.40 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › RutC-like 0.75 50.0 3.35e-01 93.0% 19.4%
1qhhD01 3.30.160.800 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.69 49.0 4.07e-01 74.4% 42.1%
1a6zA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.65 53.0 3.55e-01 95.3% 53.6%
4lq6A00 3.40.630.40 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases 0.64 55.0 3.51e-01 100.0% 47.9%
3t8kA00 1.25.40.20 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ankyrin repeat-containing domain 0.59 48.0 3.21e-01 93.0% 51.6%
2qq6A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 53.0 3.19e-01 100.0% 27.3%
1ji8A01 3.30.1420.10 Alpha Beta › 2-Layer Sandwich › Dissimilatory Siroheme-sulfite Reductase; Chain: A; domain 1 › DsrC protein, N-terminal domain 0.52 39.0 3.83e-01 83.7% 83.0%
2ihuA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.51 43.0 2.91e-01 100.0% 78.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3321224 376.1.1.25 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-UDP 0.68 51.0 4.53e-01 83.7% 75.4%
3620425 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.64 55.0 4.19e-01 100.0% 75.2%
8219 377.9.1.1 ↗ few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-MYND 0.63 46.0 4.52e-01 83.7% 83.0%
D2 high residues 70-157
PDB
Domain cluster: rep: MG592526.1__AUR91239.1__NVP1158O_12__00012__D6-93