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MG592499.1__AUR89554.1__NVP1124O_53__00053
Bact-VirMG592499.1__AUR89554.1__NVP1124O_53__00053
Identity
- Accession:
- MG592499 ↗
- Kingdom:
- phage
Quality
72.6
mean pLDDT
Taxonomy
TaxID: 1881384
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-78
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n5lA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.77 | 46.0 | 4.93e-01 | 100.0% | 70.2% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.71 | 41.0 | 4.14e-01 | 100.0% | 56.7% |
| 2rn7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 41.0 | 4.10e-01 | 83.3% | 66.7% |
| 3ismC01 | 1.25.40.240 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Ku, C-terminal domain | 0.62 | 42.0 | 3.18e-01 | 100.0% | 29.9% |
| 2a2fX02 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.62 | 39.0 | 3.17e-01 | 100.0% | 32.6% |
| 6t0bc01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 41.0 | 3.90e-01 | 98.5% | 59.0% |
| 3ddeB00 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.55 | 42.0 | 2.89e-01 | 81.8% | 77.5% |
| 3nctA00 | 3.40.50.11880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Plasmid SOS inhibition protein | 0.55 | 48.0 | 3.84e-01 | 100.0% | 97.1% |
| 3nuwA02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.54 | 46.0 | 3.34e-01 | 100.0% | 60.5% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3720226 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.82 | 54.0 | 4.14e-01 | 100.0% | 33.3% |
| 3717826 | 547.1.1.0 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain | 0.82 | 54.0 | 4.51e-01 | 100.0% | 42.9% |
| 4031490 | 632.2.1.5 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1542 | 0.80 | 54.0 | 5.17e-01 | 92.4% | 61.3% |
| 3579493 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.79 | 55.0 | 4.60e-01 | 100.0% | 45.7% |
| 4501780 | 310.2.1.5 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › DUF842 | 0.73 | 52.0 | 4.15e-01 | 93.9% | 39.2% |
| 3620551 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 56.0 | 4.22e-01 | 95.5% | 44.7% |
| 3442159 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.63 | 54.0 | 4.71e-01 | 92.4% | 76.8% |
| 3740429 | 109.4.1.109 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1 | 0.59 | 49.0 | 2.89e-01 | 100.0% | 44.3% |
| 3734731 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.59 | 47.0 | 3.74e-01 | 87.9% | 85.9% |
| 3925712 | 6111.1.1.2 ↗ | a+b complex topology › C-terminal domain of cytoplasmic dynein heavy chain › C-terminal domain of cytoplasmic dynein heavy chain › C-terminal domain of cytoplasmic dynein heavy chain › AAA_lid_11 | 0.56 | 39.0 | 2.41e-01 | 72.7% | 15.1% |