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MG592523.1__AUR91118.1__NVP1155O_45__00045

Bact-Vir

MG592523.1__AUR91118.1__NVP1155O_45__00045

Identity

Accession:
MG592523 ↗
Kingdom:
phage

Quality

68.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.155.O._10N.222.55.B3

TaxID: 1881405

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 68-147
PDB
D2 high residues 151-222
PDB
Domain cluster: rep: MZ503612.1__QYC52359.1__X__00001__D31-105
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2czrA02 3.90.79.30 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › TBP-interacting protein, C-terminal domain 0.66 35.0 3.01e-01 84.7% 30.0%
3zqmA00 6.10.140.2160 Special › Helix non-globular › Helix Hairpins › 0.65 44.0 4.87e-01 98.6% 86.4%
5cygB00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.61 39.0 2.64e-01 100.0% 16.8%
1id0A00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.58 40.0 3.25e-01 73.6% 74.0%
2xrfC00 3.40.50.1580 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain 0.57 37.0 2.50e-01 100.0% 16.4%
2i9yA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 32.0 2.54e-01 93.1% 26.1%
1mhyD00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.56 47.0 2.88e-01 100.0% 37.6%
4pkcC00 6.20.90.20 Special › Other non-globular › SH3 type barrels. › Benzylsuccinate synthase gamma subunit 0.55 27.0 3.39e-01 76.4% 78.0%
2v1xA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 43.0 3.88e-01 94.4% 91.8%
2zihC00 1.10.3630.10 Mainly Alpha › Orthogonal Bundle › yeast vps74-n-term truncation variant fold › yeast vps74-n-term truncation variant domain like 0.51 43.0 3.00e-01 100.0% 67.0%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.50 35.0 3.17e-01 73.6% 74.3%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4874840 704.1.1.1 ↗ beta complex topology › Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) › Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) › Coronavirus RNA-binding domain (N-terminal part of Pfam 00937) › CoV_nucleocap 0.58 34.0 3.21e-01 80.6% 45.3%
3986225 101.1.9.32 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.57 41.0 2.99e-01 76.4% 30.7%
4964147 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.57 46.0 4.33e-01 95.8% 91.6%
4961529 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.56 47.0 4.37e-01 97.2% 92.6%
5039090 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.55 46.0 4.25e-01 97.2% 90.0%
4987135 101.1.2.30 ↗ alpha arrays › HTH › HTH › winged helix domain › TrmB 0.55 43.0 3.89e-01 90.3% 76.4%
4981961 101.1.2.819 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27231 0.55 43.0 3.45e-01 90.3% 71.9%
3711985 3883.1.1.1 ↗ alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-OH_P_transf 0.55 46.0 3.29e-01 100.0% 50.4%
4966155 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.54 45.0 3.85e-01 93.1% 85.8%
3466238 206.1.1.14 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 0.54 41.0 2.58e-01 84.7% 26.4%
3422892 101.1.2.24 ↗ alpha arrays › HTH › HTH › winged helix domain › MAGE 0.54 43.0 3.14e-01 91.7% 41.8%
5043001 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.54 44.0 4.00e-01 95.8% 82.9%
3932224 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.53 45.0 3.05e-01 100.0% 79.7%
5071948 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 42.0 4.09e-01 94.4% 98.8%
2640297 808.1.1.1 ↗ a+b duplicates or obligate multimers › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › Arterivirus nucleocapsid protein › CoV_nucleocap 0.53 36.0 3.08e-01 70.8% 72.4%
4965147 5001.1.1.292 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › HisKA_7TM 0.52 44.0 3.19e-01 100.0% 80.9%
3969345 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.52 42.0 3.15e-01 97.2% 64.5%
3577910 220.1.1.157 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29715 0.52 38.0 3.45e-01 80.6% 92.4%
4961487 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 39.0 3.50e-01 86.1% 68.7%
3493561 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.51 38.0 2.79e-01 83.3% 90.6%
3252642 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.50 37.0 2.79e-01 81.9% 94.1%