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MG592525.1__AUR91180.1__NVP1157O_12__00012

Bact-Vir

MG592525.1__AUR91180.1__NVP1157O_12__00012

Identity

Accession:
MG592525 ↗
Kingdom:
phage

Quality

73.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.157.O._10N.261.45.B7

TaxID: 1881208

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 48-127
PDB
Domain cluster: rep: MW677525.1__QXN72396.1__RCSIMONEHASTD_67__00067__D2-76
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h8lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 45.0 3.29e-01 80.0% 82.4%
2ffgA00 3.30.720.20 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 0.58 34.0 3.42e-01 87.5% 56.2%
3eb8B01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.57 32.0 3.52e-01 85.0% 68.9%
1f8wA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 44.0 3.47e-01 85.0% 89.8%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 3.97e-01 91.3% 75.9%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 39.0 3.88e-01 91.3% 72.1%
3cgbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 42.0 3.37e-01 85.0% 67.3%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 36.0 3.94e-01 97.5% 90.3%
2fb7A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.50 39.0 3.99e-01 90.0% 86.3%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4441682 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.61 47.0 3.09e-01 82.5% 51.8%
3189222 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.60 47.0 2.91e-01 83.7% 81.5%
4182040 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.60 46.0 2.92e-01 83.7% 79.1%
4419746 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.60 46.0 2.89e-01 83.7% 75.8%
3226223 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 48.0 3.64e-01 90.0% 97.1%
3605154 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 46.0 2.91e-01 85.0% 65.2%
3922964 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.59 48.0 3.08e-01 90.0% 36.4%
3927008 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 47.0 3.62e-01 90.0% 76.9%
3998599 2003.1.3.27 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Amino_oxidase 0.58 44.0 2.71e-01 80.0% 90.6%
3972534 2003.1.2.24 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.58 46.0 2.99e-01 87.5% 37.3%
3937978 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.58 47.0 3.01e-01 90.0% 36.0%
4428246 2003.1.2.16 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.57 44.0 2.75e-01 83.7% 73.7%
3990948 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 46.0 2.94e-01 90.0% 41.4%
3624163 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 40.0 3.94e-01 91.3% 70.0%
3223396 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 41.0 3.68e-01 80.0% 84.3%
3574742 4.1.1.47 ↗ beta barrels › SH3 › SH3 › SH3 › Gemin6 0.55 40.0 3.88e-01 91.3% 70.0%
3354076 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.55 42.0 3.62e-01 91.3% 51.5%
3389662 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.54 40.0 4.05e-01 91.3% 81.2%
4163661 4.1.1.446 ↗ beta barrels › SH3 › SH3 › SH3 › PF30222 0.54 39.0 4.07e-01 91.3% 92.6%
3827886 4.1.1.158 ↗ beta barrels › SH3 › SH3 › SH3 › DUF3444 0.52 40.0 4.02e-01 91.3% 83.7%
3464866 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.52 37.0 3.02e-01 73.8% 68.0%
3339162 4.1.1.330 ↗ beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.52 38.0 3.34e-01 91.3% 49.2%
4927277 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.52 42.0 2.88e-01 91.3% 38.1%
3612644 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.07e-01 85.0% 71.4%
3786412 4.1.1.344 ↗ beta barrels › SH3 › SH3 › SH3 › PF31193 0.51 38.0 3.89e-01 90.0% 83.7%
4181219 323.1.1.3 ↗ a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.51 37.0 2.73e-01 80.0% 84.0%
3500573 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.51 38.0 2.55e-01 83.7% 19.4%
3684460 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.51 41.0 3.97e-01 91.3% 87.4%
5018650 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 34.0 3.81e-01 91.3% 93.3%
3424637 4.1.1.313 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7912 0.50 42.0 4.05e-01 97.5% 88.4%