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MG592533.1__AUR91882.1__NVP1166O_21__00021
Bact-VirMG592533.1__AUR91882.1__NVP1166O_21__00021
Identity
- Accession:
- MG592533 ↗
- Kingdom:
- phage
Quality
83.6
mean pLDDT
Taxonomy
TaxID: 1881341
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-80
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4h9nC00 | 1.20.58.2170 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 57.0 | 4.02e-01 | 97.1% | 26.8% |
| 6cgaC02 | 1.20.58.860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.68 | 52.0 | 5.02e-01 | 91.2% | 71.8% |
| 2fdrA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.54 | 37.0 | 3.79e-01 | 72.1% | 97.0% |
| 2pw6A00 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.50 | 37.0 | 2.55e-01 | 79.4% | 88.5% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3514792 | 5059.1.1.3 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT | 0.72 | 60.0 | 3.77e-01 | 95.6% | 17.9% |
| 3582699 | 132.1.1.1 ↗ | alpha bundles › ACP-like › Acyl-carrier protein (ACP) › Acyl-carrier protein (ACP) › PP-binding | 0.67 | 57.0 | 5.24e-01 | 95.6% | 98.9% |
| 5077435 | 2006.1.1.18 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 | 0.67 | 39.0 | 2.73e-01 | 80.9% | 18.1% |
| 5082674 | 141.1.1.0 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases | 0.65 | 53.0 | 3.55e-01 | 89.7% | 58.1% |
| 5024787 | 7064.1.1.0 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 | 0.65 | 56.0 | 4.43e-01 | 100.0% | 47.3% |
| 4028941 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.60 | 41.0 | 4.08e-01 | 79.4% | 68.6% |
| 3618865 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.56 | 43.0 | 3.75e-01 | 80.9% | 59.0% |
| 3361421 | 2002.1.1.254 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GH5_mannosidase | 0.56 | 39.0 | 2.57e-01 | 73.5% | 16.9% |
| 3741037 | 109.4.1.1487 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_GCN1_C_2 | 0.56 | 41.0 | 2.50e-01 | 79.4% | 17.0% |
| 3884722 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.56 | 35.0 | 3.60e-01 | 85.3% | 66.2% |
| 5036605 | 2004.1.1.188 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 | 0.53 | 37.0 | 2.77e-01 | 75.0% | 74.4% |
D2
high
residues 83-163
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3tufA00 | 1.10.287.4300 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Stage III sporulation protein AH-like | 0.77 | 56.0 | 4.96e-01 | 100.0% | 53.9% |
| 4g1iA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 50.0 | 5.39e-01 | 100.0% | 89.9% |
| 4dg8A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.70 | 50.0 | 4.86e-01 | 100.0% | 67.4% |
| 4alzA03 | 3.30.70.1770 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 50.0 | 5.42e-01 | 100.0% | 98.4% |
| 5xyiD01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.68 | 57.0 | 5.54e-01 | 100.0% | 83.1% |
| 4alzA01 | 3.30.1340.30 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › | 0.66 | 46.0 | 5.05e-01 | 100.0% | 96.8% |
| 5uptA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.62 | 49.0 | 4.46e-01 | 100.0% | 64.5% |
| 4iz6A02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.62 | 48.0 | 4.42e-01 | 100.0% | 64.2% |
| 2l48A00 | 3.30.70.2030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 41.0 | 4.10e-01 | 98.8% | 67.1% |
| 5w2fA01 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.60 | 41.0 | 4.10e-01 | 96.3% | 67.4% |
| 1vc1A00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.60 | 46.0 | 4.22e-01 | 84.0% | 75.5% |
| 1no5B00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.60 | 47.0 | 4.45e-01 | 100.0% | 69.6% |
| 3iteB02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.59 | 47.0 | 4.55e-01 | 100.0% | 76.3% |
| 1auzA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.59 | 45.0 | 4.01e-01 | 82.7% | 69.8% |
| 5mx4A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.58 | 50.0 | 3.64e-01 | 97.5% | 81.1% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.58 | 44.0 | 3.35e-01 | 84.0% | 45.1% |
| 1nyrA03 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 51.0 | 3.46e-01 | 100.0% | 76.9% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.58 | 50.0 | 3.68e-01 | 98.8% | 93.4% |
| 2fgeA01 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.57 | 46.0 | 3.37e-01 | 92.6% | 71.7% |
| 2yx1A02 | 3.30.300.110 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › Met-10+ protein-like domains | 0.57 | 46.0 | 4.67e-01 | 90.1% | 97.4% |
| 1wchA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 47.0 | 3.29e-01 | 96.3% | 51.3% |
| 2dyjA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.57 | 49.0 | 4.80e-01 | 100.0% | 86.8% |
| 3c26A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 47.0 | 3.38e-01 | 95.1% | 96.9% |
| 1tm0A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 43.0 | 3.69e-01 | 86.4% | 93.2% |
| 1josA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 50.0 | 4.70e-01 | 100.0% | 83.0% |
| 2bzlA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 46.0 | 3.30e-01 | 96.3% | 60.6% |
| 2rrlA01 | 3.30.750.140 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › | 0.56 | 45.0 | 4.06e-01 | 100.0% | 63.5% |
| 4hylA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.55 | 42.0 | 3.81e-01 | 84.0% | 70.8% |
| 4qtpD00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.55 | 41.0 | 3.74e-01 | 82.7% | 68.7% |
| 2pdoA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 45.0 | 4.02e-01 | 95.1% | 67.7% |
| 2g3aA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 45.0 | 4.23e-01 | 96.3% | 95.2% |
| 1vybA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.54 | 45.0 | 3.34e-01 | 97.5% | 52.1% |
| 2e7gA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.53 | 47.0 | 4.31e-01 | 100.0% | 81.1% |
| 2j63A00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.53 | 44.0 | 3.06e-01 | 98.8% | 51.7% |
| 2fiaB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 44.0 | 3.62e-01 | 96.3% | 93.7% |
| 3pg4A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 39.0 | 2.89e-01 | 81.5% | 88.3% |
| 4zm3B01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 39.0 | 3.34e-01 | 98.8% | 47.9% |
| 2kgsA01 | 3.40.1520.20 | Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1634 › | 0.51 | 44.0 | 4.01e-01 | 97.5% | 81.8% |
| 8b4hA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 38.0 | 3.16e-01 | 85.2% | 59.9% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932655 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.76 | 55.0 | 6.02e-01 | 98.8% | 93.8% |
| 4100012 | 327.13.1.5 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › SpoIIIAH | 0.75 | 55.0 | 4.80e-01 | 100.0% | 52.5% |
| 5029665 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.74 | 49.0 | 5.61e-01 | 95.1% | 98.2% |
| 4243535 | 327.13.1.15 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › Spore_YhcN_YlaJ | 0.71 | 52.0 | 5.41e-01 | 100.0% | 84.0% |
| 4197044 | 3433.1.2.0 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain | 0.70 | 43.0 | 5.19e-01 | 81.5% | 100.0% |
| 3603362 | 327.3.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain | 0.70 | 51.0 | 5.40e-01 | 98.8% | 88.6% |
| 4344707 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.69 | 50.0 | 4.75e-01 | 100.0% | 64.2% |
| 3525048 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.69 | 51.0 | 4.77e-01 | 100.0% | 63.0% |
| 3056798 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.69 | 48.0 | 5.21e-01 | 100.0% | 89.2% |
| 4985202 | 327.5.1.10 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › PF27533 | 0.69 | 53.0 | 4.94e-01 | 100.0% | 66.0% |
| 4989453 | 327.3.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › GMP synthetase C-terminal dimerisation domain › GMP synthetase C-terminal dimerisation domain | 0.69 | 53.0 | 5.39e-01 | 100.0% | 84.6% |
| 3980816 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.69 | 50.0 | 5.24e-01 | 100.0% | 84.0% |
| 5009414 | 327.5.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C_2 | 0.68 | 51.0 | 4.95e-01 | 100.0% | 72.2% |
| 5001172 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.68 | 48.0 | 4.45e-01 | 95.1% | 58.1% |
| 1676512 | 3261.1.1.3 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › BON_like | 0.67 | 39.0 | 4.39e-01 | 82.7% | 76.7% |
| 5066304 | 3261.1.1.0 ↗ | a+b two layers › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb › amino-terminal domain of OmpATb | 0.67 | 48.0 | 5.04e-01 | 100.0% | 87.1% |
| 3641694 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.67 | 47.0 | 4.31e-01 | 97.5% | 56.2% |
| 2323881 | 3433.1.2.1 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer | 0.66 | 40.0 | 4.60e-01 | 85.2% | 90.7% |
| 3408055 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.65 | 45.0 | 4.42e-01 | 76.5% | 65.6% |
| 3596068 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.64 | 45.0 | 4.42e-01 | 96.3% | 66.7% |
| 3651874 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.64 | 45.0 | 4.19e-01 | 97.5% | 59.0% |
| 3979017 | 327.11.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) | 0.64 | 48.0 | 4.98e-01 | 100.0% | 88.0% |
| 4243944 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.64 | 49.0 | 4.60e-01 | 100.0% | 67.0% |
| 3621180 | 327.5.1.2 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C | 0.64 | 49.0 | 4.53e-01 | 100.0% | 63.8% |
| 3300216 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.64 | 44.0 | 4.11e-01 | 97.5% | 56.2% |
| 5029759 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.63 | 52.0 | 4.24e-01 | 91.4% | 96.8% |
| 2578927 | 327.13.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH | 0.63 | 45.0 | 4.85e-01 | 100.0% | 91.2% |
| 4670438 | 3433.1.2.1 ↗ | a+b duplicates or obligate multimers › ParB dimerization domain › ParB dimerization domain › Chromosome-encoded ParB dimerization domain › ParB_dimer | 0.63 | 39.0 | 4.48e-01 | 81.5% | 86.4% |
| 3986529 | 327.13.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH | 0.63 | 46.0 | 4.38e-01 | 100.0% | 66.3% |
| 3517813 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.63 | 43.0 | 4.25e-01 | 96.3% | 65.9% |
| 4020561 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.63 | 43.0 | 4.10e-01 | 97.5% | 59.0% |
| 3268852 | 327.7.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like | 0.62 | 44.0 | 4.86e-01 | 93.8% | 100.0% |
| 3814194 | 327.7.1.8 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › Peptidase_M16_M | 0.62 | 51.0 | 5.07e-01 | 90.1% | 98.8% |
| 3962117 | 2008.1.1.215 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF4191 | 0.62 | 44.0 | 3.99e-01 | 98.8% | 54.5% |
| 4026919 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.62 | 43.0 | 3.92e-01 | 96.3% | 53.6% |
| 3958042 | 327.5.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins | 0.62 | 48.0 | 4.39e-01 | 100.0% | 62.7% |
| 3171307 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.61 | 44.0 | 3.91e-01 | 97.5% | 53.0% |
| 3204533 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.59 | 44.0 | 4.60e-01 | 82.7% | 98.7% |
| 4989946 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.59 | 44.0 | 4.00e-01 | 100.0% | 59.1% |
| 3781316 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 45.0 | 4.07e-01 | 84.0% | 77.4% |
| 3960730 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.58 | 46.0 | 4.10e-01 | 90.1% | 73.6% |
| 3998431 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.57 | 41.0 | 3.78e-01 | 96.3% | 56.4% |
| 3956491 | 2496.1.1.2 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS | 0.57 | 43.0 | 3.82e-01 | 84.0% | 64.8% |
| 3500307 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.56 | 41.0 | 3.67e-01 | 80.2% | 53.9% |
| 3165211 | 2496.1.1.5 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like › STAS_2 | 0.56 | 41.0 | 3.81e-01 | 79.0% | 100.0% |
| 3363082 | 304.30.1.1 ↗ | a+b two layers › Alpha-beta plaits › D-ribose-5-phosphate isomerase (RpiA), lid domain › D-ribose-5-phosphate isomerase (RpiA), lid domain › Rib_5-P_isom_A | 0.55 | 45.0 | 4.33e-01 | 91.4% | 81.1% |
| 3843541 | 306.3.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › SUI1 | 0.55 | 39.0 | 3.61e-01 | 96.3% | 56.4% |
| 5081098 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.55 | 46.0 | 3.15e-01 | 95.1% | 48.8% |
| 4817370 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.54 | 46.0 | 3.73e-01 | 95.1% | 75.0% |
| 4961225 | 213.5.1.1 ↗ | a+b three layers › Nat/Ivy › AlkZ C-terminal domain › AlkZ C-terminal domain › AlkZ-like | 0.53 | 46.0 | 4.39e-01 | 97.5% | 96.8% |
| 3724051 | 6044.1.1.0 ↗ | a+b three layers › DUF1827-like › DUF1827-like › DUF1827-like | 0.51 | 42.0 | 3.87e-01 | 100.0% | 69.5% |
D3
high
residues 165-264
Domain cluster:
rep: NC_054725.1__YP_010059442.1__KHQ85_gp192__00192__D466-576
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.58 | 39.0 | 4.30e-01 | 70.0% | 95.2% |
| 1kvdB00 | 3.30.44.10 | Alpha Beta › 2-Layer Sandwich › Smk Toxin, Beta chain › Smk Toxin, beta chain | 0.55 | 38.0 | 4.17e-01 | 77.0% | 93.5% |
| 1o14A02 | 2.20.150.10 | Mainly Beta › Single Sheet › putative 5-dehydro-2- deoxygluconokinase like fold › putative 5-dehydro-2- deoxygluconokinase | 0.54 | 26.0 | 3.36e-01 | 96.0% | 83.0% |
| 1es0A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 34.0 | 3.50e-01 | 77.0% | 64.6% |
| 1y8xB00 | 3.10.290.20 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › Ubiquitin-like 2 activating enzyme e1b. Chain: B, domain 3 | 0.52 | 37.0 | 3.85e-01 | 75.0% | 91.3% |
| 1c16A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 4.09e-01 | 83.0% | 88.7% |
| 3cebA01 | 3.30.470.10 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Aminotransferase class 4, branched-chain amino acid transferase, N-terminal domain | 0.50 | 34.0 | 3.68e-01 | 77.0% | 83.5% |
| 1jvnA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.50 | 39.0 | 2.79e-01 | 96.0% | 28.0% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957578 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.79 | 66.0 | 6.96e-01 | 98.0% | 100.0% |
| 3946544 | 3228.1.1.0 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III | 0.79 | 73.0 | 7.20e-01 | 100.0% | 99.0% |
| 5002740 | 3228.1.1.0 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III | 0.75 | 68.0 | 6.57e-01 | 99.0% | 99.1% |
| 3977755 | 3228.1.1.2 ↗ | a+b two layers › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate structural protein gp6 C-terminal domain III › Baseplate_J_C | 0.73 | 58.0 | 6.26e-01 | 96.0% | 100.0% |
| 3313414 | 229.1.1.7 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › TRIP13_N | 0.67 | 55.0 | 5.80e-01 | 99.0% | 98.9% |
| 3209734 | 229.1.1.7 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › TRIP13_N | 0.63 | 54.0 | 5.55e-01 | 100.0% | 97.9% |
| 3257012 | 229.1.1.1 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › CDC48_2 | 0.61 | 52.0 | 5.30e-01 | 100.0% | 96.8% |
| 3927643 | 229.1.1.0 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like | 0.60 | 46.0 | 4.88e-01 | 95.0% | 97.6% |
| 3580586 | 229.1.1.4 ↗ | a+b two layers › Cdc48 domain 2-like › Cdc48 domain 2-like › Cdc48 domain 2-like › Pch2_N | 0.59 | 46.0 | 4.84e-01 | 97.0% | 95.6% |
| 5073307 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.55 | 37.0 | 3.87e-01 | 71.0% | 90.5% |
| 3371275 | 323.1.1.7 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Transferase | 0.54 | 39.0 | 3.31e-01 | 77.0% | 76.6% |
| 3301034 | 304.7.1.2 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 | 0.51 | 35.0 | 3.78e-01 | 72.0% | 98.8% |
| 3391210 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.50 | 42.0 | 4.10e-01 | 94.0% | 89.1% |
| 3520564 | 3346.1.1.5 ↗ | a+b two layers › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › N-terminal domain in ubiquitin-fold modifier 1 specific protease UfSP2 › ODR4-like | 0.50 | 44.0 | 3.51e-01 | 98.0% | 74.6% |