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MG592533.1__AUR91887.1__NVP1166O_26__00026

Bact-Vir

MG592533.1__AUR91887.1__NVP1166O_26__00026

Identity

Accession:
MG592533 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.166.O._10N.261.51.C7

TaxID: 1881341

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-78
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ubvA02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 50.0 5.18e-01 100.0% 93.0%
4mtnA01 3.30.1480.10 Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain 0.64 49.0 4.65e-01 84.6% 94.7%
6rxaA01 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.61 43.0 4.14e-01 89.7% 65.5%
1tj7A03 1.10.40.30 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) 0.59 39.0 4.06e-01 88.5% 73.2%
1jkwA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 44.0 4.09e-01 85.9% 63.4%
3mvuA00 1.20.910.10 Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like 0.56 43.0 3.20e-01 84.6% 93.8%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 44.0 4.18e-01 91.0% 100.0%
3hc1A00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.55 45.0 3.14e-01 96.2% 60.4%
1n5uA01 1.10.246.10 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.54 39.0 3.57e-01 87.2% 57.3%
4b4yA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.52 37.0 3.07e-01 75.6% 99.3%
3fajA00 1.20.120.950 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 0.51 42.0 3.84e-01 88.5% 80.2%
1jwnA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 38.0 3.16e-01 80.8% 95.2%
ECOD (21)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3838410 148.1.3.55 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Mg_chelatase_C 0.68 50.0 5.30e-01 96.2% 93.8%
3385527 148.1.3.55 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Mg_chelatase_C 0.68 48.0 5.27e-01 89.7% 98.3%
4042821 4230.1.1.0 ↗ alpha arrays › DnaD domain › DnaD domain › DnaD domain 0.67 61.0 5.51e-01 100.0% 75.2%
5067260 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.65 45.0 4.34e-01 92.3% 63.3%
4216647 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.64 45.0 4.20e-01 89.7% 60.0%
3594498 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.64 51.0 5.38e-01 94.9% 100.0%
5031192 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.63 42.0 4.05e-01 88.5% 60.0%
4987569 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.63 45.0 4.20e-01 89.7% 61.1%
5008653 5069.1.1.26 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › NrfD 0.62 42.0 3.23e-01 70.5% 83.3%
3700655 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 49.0 4.00e-01 97.4% 60.0%
4639278 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.59 40.0 4.11e-01 85.9% 72.0%
4533966 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.57 39.0 3.94e-01 88.5% 70.0%
4927310 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.57 40.0 3.75e-01 89.7% 60.0%
5060357 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.57 47.0 4.70e-01 100.0% 91.3%
4510528 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.57 39.0 3.73e-01 84.6% 61.1%
4870551 101.1.10.14 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C_2 0.57 39.0 3.82e-01 85.9% 65.9%
3967276 5001.1.1.15 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TMR-DISM_7TM 0.57 42.0 3.08e-01 79.5% 88.4%
4042981 4953.1.1.4 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › ASL_C2 0.56 39.0 3.83e-01 83.3% 65.9%
3927756 3817.1.1.1 ↗ alpha bundles › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Peroxisomal biogenesis factor 19 › Pex19 0.55 38.0 3.31e-01 71.8% 77.5%
3734131 130.1.1.1 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › SAP 0.54 38.0 4.16e-01 74.4% 87.7%
3483479 101.8.1.0 ↗ alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases 0.53 41.0 3.08e-01 82.1% 40.5%