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MG592537.1__AUR92190.1__NVP1170O_077__00077

Bact-Vir

MG592537.1__AUR92190.1__NVP1170O_077__00077

Identity

Accession:
MG592537 ↗
Kingdom:
phage

Quality

57.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.170.O._10N.261.52.C3

TaxID: 1881390

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-126
PDB
Domain cluster: rep: OM835951.1__UNI73656.1__KP12_246__00246__D220-313
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF10544.16 best T5orf172 23.4 9.60e-05 88.0% 86.7%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1khvA03 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.55 44.0 4.41e-01 87.2% 100.0%
1zpwX00 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 29.0 3.44e-01 84.8% 76.8%
1u8sA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 34.0 3.98e-01 86.4% 93.0%
4pc3C02 3.30.479.20 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Elongation factor Ts, dimerisation domain 0.53 32.0 3.77e-01 92.8% 87.2%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 31.0 3.65e-01 85.6% 86.6%
1u8sA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.51 32.0 3.79e-01 85.6% 94.0%
1s7hA01 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 32.0 3.76e-01 87.2% 95.0%
1kwmA01 3.30.70.340 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like 0.51 31.0 3.68e-01 88.0% 87.5%
4pxdA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 41.0 4.31e-01 86.4% 96.5%
2yweA04 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 29.0 3.09e-01 84.8% 61.4%
2x7gA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 28.0 3.29e-01 74.4% 76.1%
3ce8A00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 32.0 3.67e-01 86.4% 89.9%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4996322 821.1.1.14 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.75 54.0 5.86e-01 96.0% 88.6%
3689357 821.1.1.3 ↗ a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 0.70 57.0 5.13e-01 88.0% 64.8%
5078886 331.3.1.0 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.65 33.0 3.50e-01 100.0% 54.5%
3784880 304.3.1.0 ↗ a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.58 37.0 4.37e-01 87.2% 95.3%
3781133 304.24.1.7 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › V_ATPase_I 0.56 32.0 3.87e-01 86.4% 86.3%
3758051 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.56 41.0 4.41e-01 98.4% 91.4%
5249 304.8.1.9 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_6 0.54 34.0 3.98e-01 86.4% 93.0%
5048300 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.52 33.0 3.61e-01 88.8% 77.1%
4012800 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.51 45.0 3.52e-01 100.0% 76.9%
4064436 304.24.1.1 ↗ a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_C 0.51 30.0 3.24e-01 87.2% 66.4%
3701279 304.107.1.10 ↗ a+b two layers › Alpha-beta plaits › Aminomethyltransferase folate-binding domain › Aminomethyltransferase folate-binding domain › BBS7_pf 0.51 36.0 4.07e-01 88.0% 96.8%
D2 high residues 129-232
PDB