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MG592537.1__AUR92230.1__NVP1170O_117__00117

Bact-Vir

MG592537.1__AUR92230.1__NVP1170O_117__00117

Identity

Accession:
MG592537 ↗
Kingdom:
phage

Quality

85.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-66
PDB
D2 high residues 79-137
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.72 61.0 3.81e-01 93.2% 30.8%
4o38A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 55.0 4.60e-01 84.7% 93.8%
2rkuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.68 50.0 4.36e-01 78.0% 91.0%
4kbmB01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 57.0 5.92e-01 100.0% 100.0%
4y85C01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 50.0 3.89e-01 79.7% 92.7%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 5.64e-01 91.5% 96.2%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 58.0 4.41e-01 100.0% 89.4%
3frnA03 2.30.30.760 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 5.17e-01 100.0% 92.2%
4iupA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 59.0 5.52e-01 100.0% 87.5%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 58.0 4.63e-01 100.0% 59.8%
5l37C00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.65 51.0 4.50e-01 84.7% 87.2%
1u04A02 3.90.70.180 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.64 54.0 4.46e-01 98.3% 88.4%
3lltA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 57.0 4.88e-01 100.0% 89.2%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 54.0 4.43e-01 96.6% 57.4%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 54.0 5.26e-01 100.0% 86.4%
4fg9A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 49.0 4.43e-01 84.7% 88.6%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 53.0 5.25e-01 100.0% 90.5%
4exrA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 42.0 3.99e-01 91.5% 60.6%
4euuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 51.0 4.43e-01 93.2% 93.3%
4b63A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 47.0 2.80e-01 86.4% 35.9%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.90e-01 100.0% 84.6%
2krtA01 3.10.450.270 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 4.11e-01 91.5% 63.1%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 42.0 4.04e-01 83.1% 62.9%
2w4oA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 47.0 4.30e-01 84.7% 84.4%
2x6hA02 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.60 49.0 3.73e-01 96.6% 72.0%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 53.0 4.89e-01 100.0% 84.0%
1x0tA02 6.20.50.20 Special › Other non-globular › N-terminal domain of TfIIb › 0.60 35.0 3.88e-01 78.0% 75.6%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.58 52.0 4.95e-01 100.0% 85.5%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.58 45.0 4.61e-01 86.4% 91.1%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.58 42.0 3.30e-01 78.0% 71.4%
4tm3A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 47.0 2.85e-01 93.2% 38.4%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 43.0 3.38e-01 94.9% 37.8%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 43.0 2.70e-01 88.1% 43.8%
3kkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 44.0 3.46e-01 96.6% 81.2%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 44.0 2.91e-01 96.6% 34.2%
2r0cA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 43.0 2.86e-01 88.1% 47.5%
2rowA01 3.30.60.20 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.53 45.0 4.30e-01 98.3% 84.5%
1krlA00 6.20.50.130 Special › Other non-globular › N-terminal domain of TfIIb › 0.53 32.0 3.50e-01 74.6% 77.3%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.53 42.0 3.84e-01 96.6% 83.5%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.53 45.0 4.03e-01 100.0% 90.0%
3u12A00 2.30.29.180 Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain 0.53 43.0 3.76e-01 98.3% 77.9%
3s5wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 46.0 2.82e-01 98.3% 40.7%
1oxxK02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 38.0 4.16e-01 76.3% 100.0%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 45.0 3.61e-01 98.3% 92.7%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.53 46.0 3.99e-01 100.0% 90.4%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 42.0 2.75e-01 89.8% 27.6%
1a2pA00 3.10.450.30 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Microbial ribonucleases 0.53 44.0 3.68e-01 96.6% 58.3%
1ykkB00 2.60.130.10 Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase 0.52 43.0 2.97e-01 96.6% 67.2%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.52 36.0 3.90e-01 79.7% 91.7%
1gpqB00 3.40.1420.10 Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme 0.51 40.0 3.27e-01 94.9% 75.0%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3585214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 57.0 4.77e-01 86.4% 44.0%
4168653 4.1.1.111 beta barrels › SH3 › SH3 › SH3 › Tudor_RapA 0.76 57.0 6.14e-01 94.9% 94.0%
4519674 4.1.1.186 beta barrels › SH3 › SH3 › SH3 › DUF5397 0.76 65.0 6.54e-01 100.0% 94.8%
3790784 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.74 57.0 3.64e-01 93.2% 18.5%
3987601 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.88e-01 91.5% 98.0%
5054123 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.71 48.0 4.58e-01 89.8% 60.0%
3937478 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 63.0 5.10e-01 100.0% 57.3%
3427044 4.1.1.36 beta barrels › SH3 › SH3 › SH3 › FeThRed_A 0.69 60.0 5.26e-01 98.3% 88.9%
2388493 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.67 46.0 4.57e-01 83.1% 67.2%
3993228 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.67 54.0 3.54e-01 89.8% 45.7%
3317787 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 51.0 5.44e-01 89.8% 98.0%
3319421 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 51.0 5.39e-01 89.8% 98.0%
3750522 4.1.1.218 beta barrels › SH3 › SH3 › SH3 › PWP3A-B_N 0.67 55.0 4.50e-01 91.5% 50.0%
3784770 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 59.0 5.43e-01 98.3% 94.7%
3730229 4.1.1.102 beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.66 57.0 5.29e-01 98.3% 74.7%
3508085 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.66 46.0 4.46e-01 83.1% 66.2%
4936051 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 52.0 5.41e-01 93.2% 92.7%
3679619 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.65 45.0 3.48e-01 88.1% 32.1%
1933605 2.16.1.1 beta barrels › OB-fold › EutN/CcmL-like › EutN/CcmL-like › EutN_CcmL 0.65 51.0 4.50e-01 84.7% 87.2%
3520811 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.65 45.0 4.28e-01 83.1% 61.4%
3557649 4.8.1.20 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PWP3A-B_N 0.64 55.0 4.56e-01 98.3% 54.3%
3388887 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.64 44.0 4.36e-01 83.1% 67.7%
3175156 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 56.0 5.30e-01 100.0% 95.7%
145843 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.63 54.0 4.43e-01 96.6% 57.4%
147045 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.63 45.0 3.22e-01 100.0% 25.0%
5035742 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 52.0 5.24e-01 98.3% 91.7%
4938919 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 50.0 4.91e-01 94.9% 81.5%
3402542 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.61 42.0 4.01e-01 84.7% 58.7%
1382449 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.61 50.0 3.69e-01 91.5% 50.3%
4436049 1190.1.1.1 a+b two layers › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › Curli production assembly/transport component CsgF › CsgF 0.61 39.0 3.32e-01 91.5% 38.0%
4965032 375.1.1.343 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7835 0.60 45.0 4.63e-01 81.4% 100.0%
3937157 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.59 46.0 4.39e-01 86.4% 80.0%
4942589 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 52.0 4.98e-01 100.0% 87.1%
4997059 4.1.1.139 beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.59 53.0 4.88e-01 100.0% 84.0%
4928794 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 42.0 4.67e-01 81.4% 100.0%
4379563 375.1.1.289 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5679 0.59 40.0 4.43e-01 78.0% 93.3%
3942912 4.1.1.323 beta barrels › SH3 › SH3 › SH3 › WYL 0.58 49.0 4.44e-01 100.0% 74.1%
4981121 375.1.1.5 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L44 0.58 47.0 4.54e-01 93.2% 84.1%
4000391 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 49.0 3.11e-01 94.9% 28.2%
3277727 4.8.1.43 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP 0.57 45.0 3.91e-01 88.1% 58.9%
3988706 243.3.1.13 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF5590 0.57 46.0 4.39e-01 96.6% 78.6%
4436471 2.4.1.0 beta barrels › OB-fold › MOP-like › MOP-like 0.56 45.0 3.71e-01 86.4% 49.5%
3658020 2.1.1.123 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3 0.56 41.0 3.27e-01 81.4% 91.0%
3184113 318.1.1.0 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 0.56 41.0 3.59e-01 83.1% 60.0%
3681285 7504.1.1.1 a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › Ham1p_like 0.56 46.0 3.20e-01 91.5% 27.0%
5044388 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 42.0 4.39e-01 86.4% 100.0%
3845542 220.1.1.38 beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.55 44.0 3.84e-01 93.2% 82.0%
3283097 4.31.1.1 beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.55 46.0 3.89e-01 100.0% 59.1%
4375914 5.1.4.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › T4P_PilY1 0.55 44.0 2.57e-01 94.9% 14.5%
4497830 2003.1.2.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase 0.55 46.0 3.22e-01 93.2% 86.2%
4958447 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 46.0 3.35e-01 93.2% 67.9%
4030194 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 45.0 2.77e-01 93.2% 36.8%
3998942 220.1.1.162 beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31014 0.54 47.0 3.66e-01 98.3% 79.2%
5001969 375.1.1.338 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7479 0.54 41.0 3.76e-01 84.7% 85.0%
4329624 2.4.1.12 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.54 43.0 3.59e-01 88.1% 55.2%
4945471 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 45.0 4.42e-01 100.0% 90.8%
3493244 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.54 43.0 2.74e-01 93.2% 19.4%
3984366 5.1.2.32 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Phytase-like 0.53 43.0 2.68e-01 96.6% 34.5%
3890418 220.1.1.38 beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.53 44.0 3.77e-01 100.0% 79.0%
3933561 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 37.0 3.17e-01 78.0% 42.9%
4932673 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.53 37.0 3.30e-01 78.0% 48.9%
4187163 2.4.1.12 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal 0.53 43.0 3.47e-01 89.8% 53.0%
3510850 3459.1.1.0 beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.53 41.0 3.73e-01 93.2% 94.4%
3991453 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 43.0 3.02e-01 100.0% 32.1%
4962895 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 38.0 3.96e-01 91.5% 90.9%
3937782 2484.1.1.9 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve 0.52 38.0 2.82e-01 79.7% 30.9%
3926267 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 38.0 2.86e-01 79.7% 31.2%
3832602 708.1.1.0 beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain 0.52 42.0 3.55e-01 93.2% 66.4%
4172303 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.52 37.0 2.98e-01 78.0% 36.0%
2987525 5.1.3.23 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.52 43.0 2.81e-01 96.6% 46.1%
4944107 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.52 44.0 3.31e-01 98.3% 95.5%
4317888 2003.1.2.147 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_3 0.52 42.0 3.42e-01 94.9% 92.8%
4935792 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 43.0 3.26e-01 98.3% 93.8%
5035761 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.51 44.0 3.03e-01 100.0% 53.5%
5061853 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 44.0 3.55e-01 98.3% 88.3%
3606532 2484.6.1.0 mixed a+b and a/b › Ribonuclease H-like › Periplasmic domain of ExbD/TolR › Periplasmic domain of ExbD/TolR 0.51 35.0 3.10e-01 79.7% 46.7%
4982874 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.51 38.0 3.07e-01 83.1% 92.0%
3778195 9.2.1.3 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › FBO_C 0.51 40.0 2.94e-01 91.5% 95.0%
3969301 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 43.0 3.40e-01 98.3% 91.5%
5052424 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.50 37.0 2.95e-01 84.7% 80.7%
D3 high residues 151-212
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21817.4 best CapR 40.4 3.80e-10 100.0% 85.1%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 47.0 4.98e-01 82.3% 79.6%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.67 53.0 5.02e-01 100.0% 72.4%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.64 44.0 3.56e-01 80.6% 35.7%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.61 53.0 5.01e-01 96.8% 93.2%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 4.15e-01 98.4% 46.6%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.60 48.0 4.66e-01 100.0% 80.0%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 51.0 4.23e-01 100.0% 62.4%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 51.0 4.22e-01 100.0% 84.5%
1whjA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.57 49.0 4.25e-01 100.0% 80.4%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.57 46.0 4.45e-01 100.0% 78.7%
3tw6D02 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.56 42.0 4.00e-01 93.5% 68.4%
2greA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.55 40.0 2.68e-01 77.4% 81.8%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 44.0 4.31e-01 96.8% 85.5%
3jv1A00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.54 46.0 3.34e-01 96.8% 66.5%
2pm9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 45.0 2.91e-01 100.0% 21.7%
1vheA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.53 38.0 2.54e-01 77.4% 80.0%
6n8pA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 45.0 2.79e-01 96.8% 20.7%
3vz9B00 3.30.457.50 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Chromosome segregation protein Spc25 0.53 40.0 3.42e-01 82.3% 77.7%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 42.0 3.47e-01 96.8% 85.6%
7sulB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 2.72e-01 96.8% 29.9%
4e6fA00 3.30.530.80 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.51 43.0 3.25e-01 100.0% 74.9%
2iayA00 3.30.1820.10 Alpha Beta › 2-Layer Sandwich › Lp2179-like fold › Lp2179-like 0.51 37.0 3.14e-01 82.3% 43.9%
3q90B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 41.0 3.36e-01 96.8% 83.8%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4519674 4.1.1.186 beta barrels › SH3 › SH3 › SH3 › DUF5397 0.75 59.0 6.11e-01 100.0% 91.4%
3585214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 50.0 4.27e-01 95.2% 49.0%
3783617 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.65 56.0 5.22e-01 100.0% 97.5%
3742627 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.64 55.0 4.68e-01 98.4% 68.3%
4851967 4.1.1.32 beta barrels › SH3 › SH3 › SH3 › CarD_TRCF_RID 0.63 49.0 4.97e-01 98.4% 88.7%
4013406 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 53.0 5.03e-01 96.8% 96.0%
3842361 1.1.5.76 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.62 54.0 4.74e-01 100.0% 83.2%
3198697 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.62 54.0 3.48e-01 100.0% 30.6%
3189521 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.61 53.0 4.85e-01 100.0% 87.1%
4012945 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 52.0 4.97e-01 98.4% 92.0%
3791777 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.60 51.0 4.66e-01 96.8% 85.9%
4977206 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.55e-01 100.0% 85.0%
3917043 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.60 51.0 3.77e-01 98.4% 41.7%
3470175 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.60 51.0 4.74e-01 96.8% 87.5%
3940934 4023.1.1.0 a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core 0.60 45.0 3.89e-01 90.3% 52.6%
578 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 52.0 4.14e-01 100.0% 54.7%
3550168 4.8.1.27 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › CUL7_CUL9_N 0.59 50.0 4.43e-01 93.5% 78.9%
3583630 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.58 48.0 2.98e-01 93.5% 22.8%
5075528 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.58 46.0 4.11e-01 95.2% 61.1%
3595489 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.57 41.0 4.16e-01 85.5% 78.3%
3239313 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.57 47.0 3.04e-01 93.5% 26.2%
3164281 5069.1.1.92 alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › CcmF_C 0.57 48.0 4.21e-01 98.4% 90.0%
None 0.57 43.0 2.82e-01 91.9% 17.6%
3198325 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 49.0 3.14e-01 100.0% 24.8%
4978541 2011.1.1.11 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M42 0.56 40.0 2.65e-01 75.8% 74.0%
3585671 4.1.1.18 beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.55 41.0 4.44e-01 82.3% 100.0%
4999151 2011.1.1.11 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M42 0.55 40.0 2.64e-01 77.4% 83.6%
4963603 2011.1.1.11 a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M42 0.55 39.0 2.63e-01 77.4% 83.8%
3213653 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.54 44.0 4.14e-01 93.5% 93.8%
4870077 243.1.1.2 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 0.54 45.0 3.58e-01 96.8% 86.1%
2774928 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.54 45.0 2.90e-01 100.0% 21.4%
3457412 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 44.0 3.02e-01 100.0% 38.1%
3166499 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 44.0 2.56e-01 100.0% 9.8%
3774407 109.21.1.3 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Sec16_C 0.53 43.0 2.51e-01 100.0% 12.8%
4547494 109.21.1.0 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain 0.53 44.0 2.53e-01 100.0% 9.7%
3612733 109.21.1.0 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain 0.53 43.0 2.50e-01 96.8% 13.2%
4279088 109.21.1.0 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain 0.52 43.0 2.47e-01 100.0% 12.8%
3407209 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.51 40.0 3.02e-01 98.4% 32.0%
3786015 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.51 42.0 2.43e-01 96.8% 8.9%
4074775 5.1.5.143 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › TPR_Sec16 0.51 42.0 2.42e-01 100.0% 12.5%
3555728 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 42.0 2.67e-01 100.0% 24.1%
None 0.51 41.0 2.36e-01 96.8% 10.7%
3586434 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.51 39.0 2.97e-01 93.5% 33.1%
4229593 5.1.4.30 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LLGL 0.51 40.0 2.55e-01 95.2% 21.5%
3744711 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.50 38.0 2.92e-01 93.5% 31.8%
D4 high residues 227-282
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21817.4 best CapR 49.8 4.60e-13 96.4% 77.6%
D5 high residues 305-402
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF10544.16 best T5orf172 28.6 2.40e-06 93.9% 89.8%
PF13455.13 MUG113 23.9 7.10e-05 78.6% 68.5%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fwrA01 3.40.1170.30 Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › 0.74 41.0 5.21e-01 99.0% 93.0%
3dgpA00 3.30.70.2610 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 39.0 4.72e-01 85.7% 88.7%
1ln0A00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.66 50.0 5.19e-01 80.6% 98.9%
2cuhA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 35.0 3.73e-01 100.0% 58.0%
1ywlA00 3.40.1440.10 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease 0.65 54.0 5.52e-01 99.0% 91.7%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 43.0 4.40e-01 89.8% 74.2%
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.62 33.0 4.28e-01 94.9% 100.0%
4gi3C00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.62 33.0 4.11e-01 76.5% 87.7%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.56 48.0 4.42e-01 94.9% 98.4%
2f7vA01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.55 34.0 2.56e-01 91.8% 24.2%
1konA02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.54 41.0 4.33e-01 81.6% 87.8%
1mw7A02 3.30.70.980 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain 0.52 40.0 4.20e-01 81.6% 98.9%
8p2bA01 3.90.1010.20 Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A › 0.52 32.0 3.46e-01 100.0% 75.0%
2uvaG06 1.20.930.70 Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › 0.51 44.0 4.14e-01 94.9% 95.8%
2vfkA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.50 44.0 3.50e-01 98.0% 61.0%
2wp7A00 3.90.1720.30 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › PPPDE domains 0.50 43.0 3.77e-01 100.0% 74.7%
6vh5C03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.50 37.0 3.95e-01 78.6% 100.0%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.50 42.0 3.56e-01 92.9% 87.4%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3365225 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.80 57.0 5.27e-01 79.6% 60.0%
3666940 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.78 56.0 5.25e-01 79.6% 60.8%
3698242 821.1.1.10 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 0.76 70.0 6.39e-01 98.0% 79.7%
4997210 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.73 58.0 6.10e-01 100.0% 91.1%
3942510 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.72 61.0 6.27e-01 98.0% 92.6%
4623707 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.72 61.0 6.24e-01 96.9% 92.6%
4397568 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.71 61.0 6.40e-01 96.9% 97.8%
4158495 821.1.1.1 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG 0.71 61.0 6.36e-01 96.9% 100.0%
3222010 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.67 42.0 3.79e-01 95.9% 46.7%
3626566 216.1.1.4 a+b two layers › UBC-like › UBC-like › UBC-like › RWD 0.66 44.0 4.13e-01 96.9% 57.4%
4974123 821.1.1.14 a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF2797 0.61 54.0 5.40e-01 100.0% 93.0%
3433039 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.61 49.0 4.87e-01 91.8% 83.0%
4054900 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.61 47.0 3.98e-01 94.9% 51.0%
3986782 304.37.1.1 a+b two layers › Alpha-beta plaits › Sulfite reductase, domains 1 and 3 › Sulfite reductase, domains 1 and 3 › NIR_SIR_ferr 0.57 41.0 3.42e-01 94.9% 43.6%
4025268 2005.1.1.7 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d 0.56 39.0 2.73e-01 71.4% 95.0%
3927490 304.7.1.0 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors 0.56 38.0 3.91e-01 91.8% 74.4%
3249252 5001.1.1.0 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.55 49.0 3.41e-01 99.0% 69.4%
5076535 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 47.0 4.31e-01 96.9% 98.5%
3386827 304.8.1.3 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NapD 0.52 34.0 3.53e-01 89.8% 69.5%
3808328 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 4.21e-01 95.9% 97.6%
5049763 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.52 45.0 3.99e-01 94.9% 91.4%
4025925 219.1.1.37 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C97 0.52 44.0 4.13e-01 98.0% 83.2%
3458522 108.1.1.46 alpha arrays › EF-hand › EF-hand-related › EF-hand › Caleosin 0.51 39.0 3.98e-01 95.9% 84.2%