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MG592537.1__AUR92297.1__NVP1170O_184__00184
Bact-VirMG592537.1__AUR92297.1__NVP1170O_184__00184
Identity
- Accession:
- MG592537 ↗
- Kingdom:
- phage
Quality
74.4
mean pLDDT
Taxonomy
TaxID: 1881390
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-69
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 61.0 | 4.29e-01 | 98.6% | 43.8% |
| 2xokP00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.68 | 52.0 | 5.14e-01 | 97.1% | 78.4% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 54.0 | 4.83e-01 | 88.4% | 83.8% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.67 | 60.0 | 4.41e-01 | 100.0% | 84.2% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 57.0 | 5.16e-01 | 100.0% | 69.8% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 55.0 | 4.84e-01 | 98.6% | 64.7% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 55.0 | 4.89e-01 | 100.0% | 93.2% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 47.0 | 4.03e-01 | 94.2% | 48.7% |
| 3akjA02 | 1.10.1070.20 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › | 0.63 | 53.0 | 3.80e-01 | 91.3% | 80.1% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 50.0 | 4.63e-01 | 97.1% | 66.3% |
| 3sjqC00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 54.0 | 5.16e-01 | 98.6% | 83.7% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.62 | 53.0 | 5.10e-01 | 97.1% | 82.7% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 50.0 | 4.71e-01 | 92.8% | 95.4% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.60 | 43.0 | 3.88e-01 | 98.6% | 54.6% |
| 1s5jA04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.59 | 43.0 | 4.52e-01 | 87.0% | 86.9% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 41.0 | 4.23e-01 | 97.1% | 77.3% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 45.0 | 4.26e-01 | 84.1% | 92.7% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 48.0 | 4.15e-01 | 91.3% | 63.2% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.57 | 47.0 | 4.46e-01 | 97.1% | 76.5% |
| 2vf8B02 | 1.20.1580.10 | Mainly Alpha › Up-down Bundle › ABC transporter ATPase like fold › ABC transporter ATPase like domain | 0.56 | 42.0 | 3.24e-01 | 79.7% | 92.5% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 48.0 | 4.41e-01 | 98.6% | 98.9% |
| 1hqoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 44.0 | 3.68e-01 | 92.8% | 63.4% |
| 4id0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 43.0 | 3.70e-01 | 88.4% | 63.4% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.54 | 45.0 | 4.19e-01 | 98.6% | 77.8% |
| 1rv2D04 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.53 | 42.0 | 4.22e-01 | 97.1% | 88.6% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3188962 | 1084.1.1.7 ↗ | extended segments › Photosystem II reaction center W protein, chloroplastic › Photosystem II reaction center W protein, chloroplastic › Photosystem II reaction center W protein, chloroplastic › Mpv17_PMP22 | 0.75 | 59.0 | 4.35e-01 | 100.0% | 33.1% |
| 4942791 | 5045.1.1.3 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › V_ATPase_I | 0.71 | 64.0 | 4.11e-01 | 100.0% | 53.9% |
| 4843090 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.71 | 58.0 | 4.97e-01 | 98.6% | 56.2% |
| 3366877 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.69 | 57.0 | 3.75e-01 | 92.8% | 56.9% |
| 3220553 | 5001.1.1.33 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srh | 0.67 | 58.0 | 4.10e-01 | 98.6% | 30.5% |
| 3261777 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.66 | 59.0 | 4.10e-01 | 100.0% | 69.3% |
| 3264065 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.66 | 53.0 | 5.06e-01 | 98.6% | 76.2% |
| 4178099 | 632.22.1.176 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › PF27734 | 0.65 | 57.0 | 4.39e-01 | 98.6% | 44.5% |
| 3600712 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.65 | 54.0 | 5.05e-01 | 98.6% | 75.3% |
| 3489761 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.64 | 55.0 | 3.94e-01 | 100.0% | 81.3% |
| 3437287 | 5086.1.1.199 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF31016 | 0.64 | 56.0 | 4.22e-01 | 100.0% | 61.1% |
| 4027114 | 3331.1.1.8 ↗ | a+b two layers › Uncharacterized protein yibL › Uncharacterized protein yibL › Uncharacterized protein yibL › RRP36 | 0.64 | 50.0 | 4.06e-01 | 92.8% | 44.4% |
| 3821144 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.63 | 54.0 | 3.17e-01 | 100.0% | 27.8% |
| 3297770 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.63 | 51.0 | 4.82e-01 | 98.6% | 72.9% |
| 3725506 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.63 | 54.0 | 4.69e-01 | 98.6% | 90.9% |
| 5023625 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.62 | 54.0 | 4.82e-01 | 100.0% | 95.0% |
| 3170172 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.62 | 54.0 | 3.73e-01 | 100.0% | 68.8% |
| 4033238 | 101.1.2.804 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27113 | 0.61 | 49.0 | 3.73e-01 | 97.1% | 35.4% |
| 3854699 | 3860.1.1.285 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › Casc1_N | 0.61 | 51.0 | 4.52e-01 | 98.6% | 63.8% |
| 3234298 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.60 | 42.0 | 4.65e-01 | 76.8% | 92.7% |
| 3283001 | 605.1.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA_3 | 0.60 | 51.0 | 4.69e-01 | 100.0% | 71.6% |
| 3988260 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.60 | 49.0 | 3.25e-01 | 98.6% | 20.3% |
| 3593943 | 314.1.1.0 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases | 0.58 | 46.0 | 2.80e-01 | 89.9% | 90.0% |
| 5004522 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.57 | 47.0 | 2.86e-01 | 92.8% | 45.2% |
| 3424167 | 3826.1.1.84 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF7797 | 0.56 | 41.0 | 3.94e-01 | 84.1% | 67.5% |
| 4284004 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.55 | 48.0 | 3.52e-01 | 100.0% | 37.4% |
| 5019968 | 3352.1.1.49 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › DUF2206 | 0.54 | 45.0 | 2.79e-01 | 98.6% | 22.7% |