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MG592537.1__AUR92322.1__NVP1170O_209__00209

Bact-Vir

MG592537.1__AUR92322.1__NVP1170O_209__00209

Identity

Accession:
MG592537 ↗
Kingdom:
phage

Quality

85.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-95
PDB
Domain cluster: representative
CATH (52)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qywA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.94 60.0 6.02e-01 100.0% 64.2%
1x4tA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.92 56.0 7.07e-01 94.6% 98.3%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.91 59.0 5.97e-01 100.0% 67.0%
1ykhA00 6.10.140.200 Special › Helix non-globular › Helix Hairpins › 0.90 55.0 5.52e-01 94.6% 61.1%
3m7gA02 1.10.8.1010 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.89 57.0 5.74e-01 100.0% 64.2%
2rkhA02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.88 57.0 6.29e-01 100.0% 80.3%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.87 58.0 6.79e-01 98.9% 94.0%
1ij5A01 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.87 52.0 5.76e-01 96.8% 73.7%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.86 55.0 6.55e-01 100.0% 93.8%
2lm9A00 1.20.58.970 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 57.0 5.63e-01 100.0% 65.6%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.81 59.0 6.09e-01 100.0% 77.8%
8b6jF01 1.10.287.20 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain 0.80 40.0 4.72e-01 89.2% 68.7%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.80 53.0 6.34e-01 100.0% 100.0%
4i0xG00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.80 56.0 6.51e-01 100.0% 100.0%
1lrzA03 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.76 50.0 6.07e-01 89.2% 100.0%
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.76 64.0 6.02e-01 100.0% 75.2%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 63.0 6.00e-01 100.0% 77.4%
3m9vA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.73 54.0 4.46e-01 100.0% 45.2%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.73 46.0 5.69e-01 87.1% 100.0%
3ofnY00 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.72 54.0 5.06e-01 100.0% 64.3%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.71 55.0 4.79e-01 100.0% 55.6%
1yf2A02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.71 58.0 5.57e-01 100.0% 75.7%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.70 49.0 5.38e-01 100.0% 93.2%
2gtaA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.70 44.0 4.39e-01 95.7% 60.8%
2fb5A01 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.69 50.0 5.57e-01 100.0% 98.6%
3okqA00 1.20.58.1540 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain 0.68 55.0 4.90e-01 100.0% 62.4%
3ck6C02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.68 49.0 4.54e-01 100.0% 58.8%
1w9rA00 1.20.58.440 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › choline binding protein A 0.68 45.0 4.18e-01 98.9% 53.8%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.67 51.0 5.44e-01 98.9% 96.2%
3pf7B00 1.10.620.20 Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A 0.67 48.0 3.00e-01 93.5% 14.7%
2dw4A03 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.66 56.0 5.44e-01 100.0% 82.2%
1fxkC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.65 60.0 5.27e-01 100.0% 78.9%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 47.0 5.25e-01 100.0% 100.0%
2zdiC00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.64 60.0 5.07e-01 100.0% 71.6%
3aonA00 1.10.287.3240 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 58.0 4.54e-01 98.9% 95.7%
3fppA03 6.10.140.1990 Special › Helix non-globular › Helix Hairpins › 0.63 53.0 5.51e-01 100.0% 95.5%
2gtsA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.63 48.0 5.24e-01 100.0% 98.7%
2rd0B00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 61.0 5.14e-01 100.0% 71.2%
4iloA00 1.10.287.1490 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.63 60.0 4.29e-01 100.0% 44.5%
1l8dA00 1.10.287.510 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 59.0 5.69e-01 100.0% 90.3%
6grjB01 1.20.1170.10 Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › 0.61 58.0 3.86e-01 100.0% 57.4%
2nnwA02 1.10.287.4070 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 56.0 4.99e-01 98.9% 97.6%
2qe7G01 1.10.287.80 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain 0.59 52.0 5.21e-01 94.6% 100.0%
1p32B00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.57 45.0 3.68e-01 84.9% 74.3%
2zw3A00 1.20.1440.80 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Gap junction channel protein cysteine-rich domain 0.56 50.0 3.89e-01 100.0% 45.8%
2k73A00 1.20.1550.10 Mainly Alpha › Up-down Bundle › Bromodomain-like › DsbB-like 0.55 48.0 3.84e-01 95.7% 56.3%
7l9pK01 3.30.900.10 Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain 0.55 34.0 3.18e-01 76.3% 49.6%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.54 49.0 4.77e-01 98.9% 90.2%
3ibjA02 3.30.450.40 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain 0.53 44.0 3.62e-01 91.4% 83.0%
1t7pA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.53 48.0 4.01e-01 100.0% 95.5%
4ob9A00 3.60.150.10 Alpha Beta › 4-Layer Sandwich › Chorismate synthase, AroC fold › Chorismate synthase AroC 0.51 43.0 2.96e-01 90.3% 94.2%
5cgzA00 3.40.50.10320 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like 0.50 37.0 2.77e-01 77.4% 85.0%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5028061 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.79 65.0 6.61e-01 100.0% 87.8%
5062471 192.2.1.1 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.77 65.0 6.12e-01 100.0% 74.5%
4682191 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.76 62.0 4.43e-01 100.0% 31.9%
3783976 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.73 63.0 6.39e-01 100.0% 92.2%
4178886 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.72 62.0 6.07e-01 100.0% 83.0%
3506058 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.71 55.0 5.41e-01 100.0% 76.0%
5051446 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 65.0 5.51e-01 100.0% 93.6%
4956419 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.68 65.0 5.79e-01 100.0% 87.0%
4177935 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.68 65.0 5.93e-01 100.0% 84.3%
4567535 1203.1.2.0 alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 0.68 65.0 4.40e-01 100.0% 34.0%
3896368 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.67 63.0 5.29e-01 100.0% 80.4%
5041857 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.67 63.0 5.42e-01 100.0% 75.5%
4945806 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.66 62.0 5.62e-01 100.0% 88.3%
3630462 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.66 63.0 5.36e-01 100.0% 69.3%
3837772 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.66 38.0 2.83e-01 100.0% 21.6%
4469857 3747.1.1.2 a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C 0.66 62.0 5.74e-01 100.0% 89.6%
4485921 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.66 62.0 5.60e-01 100.0% 88.3%
5036014 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.65 61.0 6.11e-01 98.9% 96.8%
3812118 4207.1.1.1 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med21 0.65 51.0 4.44e-01 100.0% 56.3%
3398317 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.65 61.0 5.00e-01 100.0% 65.6%
3675934 3755.3.1.374 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › UCP030365 0.65 62.0 5.00e-01 100.0% 60.0%
3733561 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.64 60.0 4.34e-01 100.0% 38.4%
4202626 192.8.1.450 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › GPHR_N 0.64 59.0 5.65e-01 100.0% 84.8%
3397986 3755.4.1.1 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 0.64 61.0 4.74e-01 100.0% 69.4%
3971859 3747.1.1.2 a+b two layers › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flagellar hook protein FlgE D0 domain › Flg_bb_rod,Flg_bbr_C 0.64 59.0 5.51e-01 97.8% 91.8%
3680858 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.64 60.0 4.84e-01 100.0% 90.3%
4975931 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.63 59.0 4.74e-01 100.0% 69.4%
3661692 3755.4.1.56 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PF28116 0.63 57.0 4.71e-01 98.9% 58.7%
3619580 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.63 60.0 5.72e-01 100.0% 88.6%
4937431 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.63 59.0 4.76e-01 100.0% 69.1%
3573843 3291.1.1.95 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Nas2_N 0.63 60.0 5.07e-01 100.0% 66.4%
4004805 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.62 60.0 4.36e-01 100.0% 61.4%
3775175 3826.1.1.0 alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) 0.62 54.0 5.33e-01 100.0% 87.0%
3481771 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.62 57.0 5.44e-01 100.0% 84.3%
3923557 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.62 59.0 4.42e-01 100.0% 46.5%
3605252 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.62 59.0 4.70e-01 100.0% 58.8%
4281419 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 55.0 4.84e-01 100.0% 81.2%
4057653 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.61 57.0 3.97e-01 100.0% 33.5%
3932006 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 54.0 5.08e-01 97.8% 95.7%
4028346 2006.1.4.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XPG_N,XPG_I 0.61 58.0 3.89e-01 100.0% 35.8%
4626792 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.61 57.0 4.81e-01 97.8% 100.0%
4972906 3755.3.1.636 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF6788 0.61 58.0 5.24e-01 100.0% 99.2%
3470807 3755.3.1.49 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › GPHR_N 0.61 55.0 4.19e-01 100.0% 45.0%
3275580 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.60 57.0 4.80e-01 100.0% 69.7%
4416711 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.60 57.0 3.68e-01 100.0% 86.8%
4168471 4207.1.1.1 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) › Med21 0.60 49.0 4.15e-01 100.0% 53.5%
3173926 192.2.1.2 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin 0.59 53.0 4.28e-01 100.0% 68.9%
3895743 3615.1.1.7 alpha bundles › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › Bacterial dynamin-like protein helical domain › CD20 0.59 52.0 4.17e-01 100.0% 52.6%
4960230 3926.1.1.1 alpha bundles › V-type proton ATPase subunit D › V-type proton ATPase subunit D › V-type proton ATPase subunit D › ATP-synt_D 0.58 52.0 4.03e-01 100.0% 80.0%
3790375 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.58 53.0 4.77e-01 100.0% 75.2%
3591876 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.58 54.0 5.02e-01 100.0% 81.7%
3690657 3755.4.1.0 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.57 51.0 4.45e-01 100.0% 65.0%
3401562 616.1.1.0 alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain 0.56 48.0 4.89e-01 100.0% 95.6%
3498981 131.1.1.0 alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like 0.56 46.0 2.99e-01 93.5% 18.8%
3769170 192.2.1.34 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › CpG_bind_C 0.55 49.0 4.55e-01 98.9% 91.7%
3179763 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.54 50.0 3.92e-01 100.0% 50.5%
3566283 4970.1.1.17 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › CpG_bind_C 0.54 50.0 4.20e-01 100.0% 62.1%
3791945 5054.1.1.2 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.54 47.0 3.56e-01 100.0% 39.6%
3636696 3745.1.1.1 alpha bundles › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Sodium/Calcium exchanger › Na_Ca_ex 0.54 43.0 2.81e-01 86.0% 61.7%
3991750 3937.1.1.2 alpha bundles › Connexin 26 › Connexin 26 › Connexin 26 › Innexin 0.53 48.0 3.33e-01 100.0% 30.5%
3722860 2004.1.1.463 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin, Kinesin_assoc, Microtub_bd 0.52 46.0 2.96e-01 100.0% 42.4%
3170708 632.1.1.6 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Pho88 0.51 45.0 3.84e-01 95.7% 60.7%