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MG592541.1__AUR92575.1__NVP1174O_15__00015

Bact-Vir

MG592541.1__AUR92575.1__NVP1174O_15__00015

Identity

Accession:
MG592541 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.174.O._10N.261.55.A8

TaxID: 1881343

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-73
PDB
Domain cluster: representative
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1r8nA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.64 54.0 3.98e-01 95.6% 93.5%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.63 53.0 5.14e-01 95.6% 83.1%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 49.0 4.37e-01 88.2% 82.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.57e-01 95.6% 76.8%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 47.0 4.14e-01 88.2% 79.6%
2vc8A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.92e-01 91.2% 86.1%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.53e-01 94.1% 85.7%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 42.0 4.29e-01 92.6% 79.7%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 44.0 4.39e-01 100.0% 76.7%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 4.37e-01 100.0% 79.5%
1b12C01 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.58 50.0 4.22e-01 100.0% 57.0%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 46.0 4.76e-01 94.1% 96.8%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.58 45.0 4.79e-01 86.8% 100.0%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.05e-01 100.0% 67.5%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 39.0 4.25e-01 86.8% 89.3%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.57 39.0 4.19e-01 86.8% 90.7%
2efiA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 44.0 3.96e-01 95.6% 59.0%
1vwxY00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 48.0 3.97e-01 100.0% 57.5%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 41.0 4.30e-01 94.1% 91.5%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.56 37.0 4.06e-01 83.8% 94.0%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.56 43.0 3.84e-01 100.0% 58.0%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 41.0 4.11e-01 94.1% 80.9%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 41.0 4.29e-01 95.6% 94.9%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.55 43.0 4.43e-01 88.2% 93.9%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.54 45.0 3.33e-01 100.0% 39.7%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.53 44.0 3.76e-01 92.6% 56.9%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.53 36.0 3.92e-01 89.7% 94.2%
3nqkA02 2.40.128.440 Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 0.53 42.0 3.30e-01 91.2% 88.7%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 34.0 3.46e-01 79.4% 69.2%
3ec6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 3.37e-01 88.2% 89.8%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 40.0 3.09e-01 89.7% 77.6%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.52 34.0 3.74e-01 89.7% 97.9%
3op1A02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.51 44.0 3.82e-01 100.0% 73.0%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 39.0 3.84e-01 85.3% 87.5%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 41.0 3.84e-01 97.1% 79.1%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3881119 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 47.0 4.51e-01 100.0% 66.3%
2136 6.1.1.2 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › Kunitz_legume 0.64 54.0 3.98e-01 95.6% 93.5%
3547084 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 47.0 4.26e-01 100.0% 58.9%
3999723 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 47.0 3.67e-01 100.0% 36.7%
3830187 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 45.0 4.87e-01 92.6% 94.5%
3765289 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 46.0 4.21e-01 100.0% 60.0%
3330943 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.62 45.0 4.87e-01 94.1% 96.4%
3840679 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.62 45.0 4.11e-01 100.0% 56.8%
4228570 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 55.0 5.22e-01 100.0% 95.0%
3673317 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 46.0 5.06e-01 94.1% 100.0%
5066224 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.61 51.0 4.73e-01 100.0% 71.1%
3625264 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 44.0 3.96e-01 88.2% 54.7%
3883159 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.61 46.0 4.22e-01 100.0% 61.1%
4011604 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 49.0 4.82e-01 95.6% 82.7%
3928711 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.40e-01 100.0% 68.2%
4937389 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.61 50.0 4.37e-01 100.0% 58.2%
4079197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 47.0 4.45e-01 95.6% 69.4%
3294392 4.1.1.43 ↗ beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.61 44.0 4.15e-01 94.1% 62.4%
3492557 4.1.1.219 ↗ beta barrels › SH3 › SH3 › SH3 › LSM12_LSM 0.61 52.0 4.58e-01 98.5% 65.0%
3576940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 3.64e-01 98.5% 34.2%
3597690 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.90e-01 98.5% 88.6%
5077969 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.99e-01 100.0% 83.7%
3570399 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.89e-01 97.1% 95.4%
3541241 4.1.1.8 ↗ beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.60 42.0 4.44e-01 89.7% 85.0%
3407854 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.60 45.0 4.08e-01 100.0% 58.9%
3936468 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.29e-01 100.0% 61.0%
3535278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 45.0 4.71e-01 95.6% 91.7%
3926175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.24e-01 92.6% 65.9%
3920666 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 45.0 4.18e-01 100.0% 63.3%
3866038 4.1.1.154 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4772 0.59 43.0 4.05e-01 94.1% 62.4%
3261235 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 46.0 4.39e-01 100.0% 70.6%
4002896 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 46.0 4.17e-01 100.0% 62.2%
3629316 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.19e-01 100.0% 61.0%
3913334 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 44.0 4.43e-01 100.0% 80.0%
3407821 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 45.0 4.24e-01 100.0% 67.1%
4069543 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.58 49.0 4.84e-01 100.0% 88.0%
4930029 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.58 49.0 4.30e-01 100.0% 64.5%
3214653 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.07e-01 92.6% 61.1%
4026957 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 44.0 4.60e-01 100.0% 95.0%
3516048 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.05e-01 100.0% 60.0%
3451175 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 40.0 4.36e-01 86.8% 92.7%
3669494 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 47.0 3.75e-01 94.1% 44.7%
4002985 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 45.0 4.75e-01 92.6% 96.7%
184917 4.1.1.81 ↗ beta barrels › SH3 › SH3 › SH3 › LSM14 0.57 48.0 4.26e-01 94.1% 66.3%
3656401 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.46e-01 100.0% 81.3%
3484822 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.57 45.0 4.35e-01 98.5% 77.5%
3409587 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 45.0 4.18e-01 100.0% 67.8%
3570368 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.57 44.0 3.93e-01 100.0% 58.0%
1567496 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.57 43.0 4.58e-01 91.2% 100.0%
4942673 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.57 48.0 4.18e-01 100.0% 60.9%
3451171 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 46.0 4.70e-01 100.0% 98.5%
3630782 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.57 49.0 3.88e-01 98.5% 51.0%
3996279 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.57 42.0 4.08e-01 89.7% 70.0%
3707346 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 47.0 4.46e-01 95.6% 91.6%
3688068 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.56 45.0 3.59e-01 100.0% 41.3%
3251940 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.56 44.0 4.32e-01 94.1% 78.7%
3620905 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 43.0 4.01e-01 100.0% 65.6%
3622139 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 43.0 3.99e-01 100.0% 65.6%
3228278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 41.0 4.20e-01 100.0% 86.2%
3487003 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 48.0 3.92e-01 100.0% 57.0%
3939997 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.56 43.0 3.96e-01 97.1% 64.4%
3940730 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 46.0 4.19e-01 100.0% 68.4%
5023831 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 43.0 4.27e-01 88.2% 94.3%
3586953 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 44.0 4.48e-01 98.5% 98.5%
3619467 220.1.1.84 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_15 0.52 40.0 3.55e-01 88.2% 76.4%
3848399 4.8.1.24 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.52 40.0 4.06e-01 88.2% 87.1%
396031 4.22.1.1 ↗ beta barrels › SH3 › Hypothetical protein ORF131 › Hypothetical protein ORF131 › PSV_ORF131-like_dom 0.52 42.0 3.83e-01 97.1% 70.3%
3255732 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 44.0 4.03e-01 100.0% 96.8%
3833030 4.1.1.187 ↗ beta barrels › SH3 › SH3 › SH3 › DIRP 0.51 44.0 3.60e-01 100.0% 80.0%
3710893 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 44.0 3.60e-01 98.5% 63.1%
3607985 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 44.0 3.85e-01 100.0% 64.8%
3609629 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.51 42.0 3.88e-01 100.0% 75.8%
3918299 4.1.1.376 ↗ beta barrels › SH3 › SH3 › SH3 › Chromo_MORC2_6th 0.50 38.0 3.83e-01 85.3% 82.9%
3900017 4.1.1.284 ↗ beta barrels › SH3 › SH3 › SH3 › SBNO 0.50 36.0 3.17e-01 92.6% 46.7%