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MG592548.1__AUR93043.1__NVP1182O_01__00001
Bact-VirMG592548.1__AUR93043.1__NVP1182O_01__00001
Identity
- Accession:
- MG592548 ↗
- Kingdom:
- phage
Quality
76.9
mean pLDDT
Taxonomy
TaxID: 1881216
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-89
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.74 | 53.0 | 5.43e-01 | 75.3% | 78.8% |
| 1s35A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 51.0 | 4.92e-01 | 74.2% | 67.3% |
| 3a6pA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.70 | 53.0 | 2.97e-01 | 80.9% | 10.2% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.70 | 49.0 | 4.88e-01 | 73.0% | 70.7% |
| 1gqeA01 | 1.20.58.410 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor | 0.69 | 58.0 | 5.31e-01 | 89.9% | 75.2% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.69 | 45.0 | 5.39e-01 | 70.8% | 98.4% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.69 | 48.0 | 4.71e-01 | 75.3% | 67.4% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 47.0 | 5.04e-01 | 71.9% | 84.0% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.67 | 45.0 | 5.11e-01 | 71.9% | 96.9% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 46.0 | 4.62e-01 | 70.8% | 76.9% |
| 1ni3A03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.67 | 44.0 | 4.46e-01 | 76.4% | 67.0% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 46.0 | 4.88e-01 | 70.8% | 82.1% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.65 | 44.0 | 4.29e-01 | 70.8% | 63.7% |
| 2c2aA01 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.65 | 45.0 | 4.56e-01 | 71.9% | 73.3% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 46.0 | 4.67e-01 | 75.3% | 77.3% |
| 8d7hD01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.64 | 46.0 | 3.64e-01 | 74.2% | 93.6% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.64 | 41.0 | 4.28e-01 | 75.3% | 70.7% |
| 1hqoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 43.0 | 3.82e-01 | 70.8% | 53.4% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.62 | 45.0 | 4.86e-01 | 83.1% | 97.2% |
| 1wa8A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.61 | 43.0 | 4.15e-01 | 73.0% | 67.7% |
| 4etrB00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.59 | 40.0 | 3.66e-01 | 70.8% | 76.2% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 50.0 | 4.81e-01 | 93.3% | 96.1% |
| 1m5iA00 | 1.10.287.450 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 41.0 | 3.93e-01 | 74.2% | 74.3% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 41.0 | 4.49e-01 | 73.0% | 91.7% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 42.0 | 3.99e-01 | 80.9% | 81.8% |
| 1ydxA02 | 1.10.287.1120 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein | 0.56 | 44.0 | 4.47e-01 | 85.4% | 95.6% |
| 4gx0A01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 39.0 | 3.79e-01 | 74.2% | 89.3% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 37.0 | 3.79e-01 | 73.0% | 98.9% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595108 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.79 | 62.0 | 6.18e-01 | 80.9% | 80.0% |
| 3309441 | 547.1.1.0 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain | 0.79 | 56.0 | 5.58e-01 | 75.3% | 72.2% |
| 5050356 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.77 | 51.0 | 5.66e-01 | 74.2% | 85.7% |
| 3424212 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.75 | 56.0 | 5.89e-01 | 78.7% | 88.7% |
| 5050359 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.75 | 50.0 | 5.60e-01 | 70.8% | 87.1% |
| 3394272 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 55.0 | 4.28e-01 | 77.5% | 85.7% |
| 5044800 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.73 | 51.0 | 5.38e-01 | 75.3% | 81.2% |
| 3884763 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.72 | 52.0 | 4.43e-01 | 76.4% | 65.5% |
| 4511097 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.71 | 60.0 | 5.44e-01 | 88.8% | 71.3% |
| 3215342 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.71 | 51.0 | 5.05e-01 | 75.3% | 96.8% |
| 5049840 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.70 | 50.0 | 5.42e-01 | 77.5% | 88.0% |
| 3424167 | 3826.1.1.84 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › DUF7797 | 0.70 | 48.0 | 5.10e-01 | 70.8% | 82.5% |
| 5002748 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.69 | 48.0 | 5.19e-01 | 70.8% | 85.3% |
| 4929436 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.68 | 49.0 | 5.17e-01 | 74.2% | 85.0% |
| 5002294 | 223.1.1.122 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HisKA | 0.68 | 48.0 | 3.59e-01 | 74.2% | 30.2% |
| 3494871 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 56.0 | 3.41e-01 | 95.5% | 40.0% |
| 5035200 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.66 | 45.0 | 4.84e-01 | 75.3% | 82.7% |
| 3434585 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.66 | 44.0 | 3.08e-01 | 75.3% | 20.7% |
| 3841270 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.65 | 45.0 | 4.62e-01 | 70.8% | 78.8% |
| 4045132 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.65 | 48.0 | 4.46e-01 | 77.5% | 71.8% |
| 3965830 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.65 | 49.0 | 4.81e-01 | 83.1% | 85.0% |
| 3857880 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.64 | 47.0 | 4.03e-01 | 77.5% | 71.0% |
| 4116779 | 603.1.1.174 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › HisKA | 0.64 | 47.0 | 5.12e-01 | 77.5% | 90.7% |
| 3297770 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.64 | 46.0 | 4.69e-01 | 75.3% | 78.8% |
| 3982421 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.63 | 50.0 | 5.36e-01 | 85.4% | 100.0% |
| 3370743 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.62 | 47.0 | 4.91e-01 | 82.0% | 87.5% |
| 3345952 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.62 | 44.0 | 4.53e-01 | 74.2% | 80.0% |
| 3264065 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.62 | 44.0 | 4.64e-01 | 75.3% | 83.7% |
| 3366877 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 43.0 | 3.07e-01 | 75.3% | 22.7% |
| 3932308 | 605.1.1.169 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › TMEM120A-B | 0.61 | 47.0 | 4.28e-01 | 83.1% | 77.5% |
| 3296414 | 192.29.1.168 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF641 | 0.60 | 41.0 | 4.54e-01 | 75.3% | 91.4% |
| 3672410 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.60 | 45.0 | 4.46e-01 | 80.9% | 81.1% |
| 3476280 | 5059.1.1.5 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › UAA | 0.60 | 44.0 | 3.41e-01 | 78.7% | 57.6% |
| 3732192 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.60 | 47.0 | 5.14e-01 | 87.6% | 100.0% |
| 3412574 | 3291.1.1.82 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › ING | 0.58 | 46.0 | 4.10e-01 | 87.6% | 99.2% |
| 3944006 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.58 | 46.0 | 4.20e-01 | 88.8% | 68.0% |
| 3763454 | 5086.1.1.87 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › ING | 0.57 | 45.0 | 4.13e-01 | 85.4% | 68.3% |
| 4930292 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.56 | 39.0 | 4.19e-01 | 75.3% | 92.9% |
| 3719896 | 3755.2.1.0 ↗ | alpha bundles › YscO-like › Flagellar FliJ protein › Flagellar FliJ protein | 0.55 | 39.0 | 3.90e-01 | 76.4% | 82.1% |
| 3215082 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.52 | 40.0 | 3.58e-01 | 85.4% | 63.0% |