←Back to structures
MG592562.1__AUR94249.1__NVP1193O_118__00118
Bact-VirMG592562.1__AUR94249.1__NVP1193O_118__00118
Identity
- Accession:
- MG592562 ↗
- Kingdom:
- phage
Quality
85.4
mean pLDDT
Taxonomy
TaxID: 1881436
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-80
Domain cluster:
rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00232__D1-65
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 48.0 | 5.00e-01 | 70.8% | 85.3% |
| 3utoA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 51.0 | 4.20e-01 | 79.2% | 92.9% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 48.0 | 5.18e-01 | 73.6% | 100.0% |
| 3uqcB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 47.0 | 4.29e-01 | 72.2% | 96.8% |
| 2w1zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.67 | 54.0 | 4.35e-01 | 87.5% | 98.6% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.67 | 45.0 | 2.96e-01 | 70.8% | 30.3% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 4.74e-01 | 73.6% | 100.0% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 46.0 | 4.68e-01 | 73.6% | 100.0% |
| 3l8kA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 45.0 | 3.85e-01 | 76.4% | 92.7% |
| 3ic9A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 43.0 | 3.64e-01 | 73.6% | 92.6% |
| 5j60B02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 42.0 | 3.65e-01 | 75.0% | 90.8% |
| 2jiiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 45.0 | 3.92e-01 | 80.6% | 93.6% |
| 5jzjA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 45.0 | 4.14e-01 | 80.6% | 95.7% |
| 3a0oA03 | 2.70.98.70 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.59 | 48.0 | 3.30e-01 | 93.1% | 81.9% |
| 6aonA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 40.0 | 3.46e-01 | 72.2% | 93.5% |
| 1v58A01 | 3.10.450.70 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Disulphide bond isomerase, DsbC/G, N-terminal | 0.58 | 43.0 | 4.34e-01 | 86.1% | 80.3% |
| 2wtzA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.58 | 41.0 | 2.96e-01 | 76.4% | 25.6% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 46.0 | 3.81e-01 | 88.9% | 99.2% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.57 | 44.0 | 3.37e-01 | 86.1% | 86.4% |
| 3n9xA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 46.0 | 3.59e-01 | 88.9% | 83.8% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.55 | 34.0 | 3.48e-01 | 75.0% | 62.5% |
| 4jcwA02 | 2.60.40.760 | Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain | 0.53 | 37.0 | 3.53e-01 | 75.0% | 83.3% |
| 3ab1A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 38.0 | 3.26e-01 | 76.4% | 92.1% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 33.0 | 3.57e-01 | 76.4% | 82.1% |
| 6g6qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 42.0 | 3.47e-01 | 94.4% | 81.9% |
| 3oxhA01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 37.0 | 2.95e-01 | 75.0% | 94.2% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 43.0 | 3.42e-01 | 94.4% | 93.5% |
| 3itwA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.50 | 32.0 | 3.45e-01 | 90.3% | 82.1% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4376886 | 4.1.1.241 ↗ | beta barrels › SH3 › SH3 › SH3 › NifZ | 0.73 | 51.0 | 4.98e-01 | 73.6% | 96.2% |
| 4027502 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 51.0 | 5.37e-01 | 75.0% | 93.8% |
| 5081654 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.71 | 53.0 | 5.71e-01 | 77.8% | 93.3% |
| 4557124 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.71 | 51.0 | 5.18e-01 | 75.0% | 100.0% |
| 3714642 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.71 | 49.0 | 3.19e-01 | 70.8% | 31.4% |
| 3701345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 48.0 | 4.66e-01 | 70.8% | 97.5% |
| 4528717 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.70 | 53.0 | 5.48e-01 | 81.9% | 100.0% |
| 3619331 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.69 | 50.0 | 3.22e-01 | 76.4% | 27.7% |
| None | — | 0.69 | 49.0 | 3.14e-01 | 75.0% | 92.4% | |
| 4241924 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.67 | 48.0 | 4.44e-01 | 75.0% | 83.3% |
| 3725889 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.65 | 46.0 | 3.84e-01 | 75.0% | 88.5% |
| 2527953 | 5.1.2.10 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF1861 | 0.65 | 48.0 | 3.13e-01 | 77.8% | 82.4% |
| 2675820 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.65 | 47.0 | 4.37e-01 | 76.4% | 84.6% |
| 3598995 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.65 | 47.0 | 3.11e-01 | 77.8% | 82.7% |
| 3660964 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.65 | 48.0 | 4.33e-01 | 79.2% | 78.0% |
| 4888987 | 4.1.1.6 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C | 0.65 | 45.0 | 4.61e-01 | 72.2% | 100.0% |
| 3597255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 46.0 | 4.38e-01 | 75.0% | 89.4% |
| 3275539 | 206.1.1.49 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › DUF5898 | 0.64 | 47.0 | 3.26e-01 | 76.4% | 34.9% |
| 3267267 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 45.0 | 2.93e-01 | 73.6% | 94.6% |
| 1270403 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.63 | 45.0 | 3.84e-01 | 76.4% | 91.9% |
| 3834415 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.63 | 52.0 | 3.25e-01 | 94.4% | 85.2% |
| 3702551 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.62 | 45.0 | 2.85e-01 | 76.4% | 27.3% |
| 3703208 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.62 | 46.0 | 3.11e-01 | 81.9% | 68.8% |
| 4622009 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 47.0 | 2.65e-01 | 83.3% | 37.1% |
| 3929340 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.59 | 43.0 | 3.48e-01 | 77.8% | 92.4% |
| 3595257 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.59 | 48.0 | 3.25e-01 | 94.4% | 69.0% |
| 3596932 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.58 | 47.0 | 2.97e-01 | 88.9% | 95.3% |
| 5065184 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 34.0 | 3.96e-01 | 70.8% | 91.1% |
| 3935387 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.57 | 41.0 | 2.92e-01 | 77.8% | 98.3% |
| 3289062 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.57 | 49.0 | 4.63e-01 | 100.0% | 85.6% |
| 3588447 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.56 | 40.0 | 2.85e-01 | 76.4% | 90.8% |
| 3586112 | 5.1.5.134 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_EIPR1 | 0.55 | 43.0 | 3.02e-01 | 87.5% | 31.0% |
| 3191784 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 46.0 | 3.00e-01 | 93.1% | 37.0% |
| 3927196 | 5.1.4.155 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MIOS_WD40 | 0.54 | 44.0 | 2.93e-01 | 94.4% | 44.3% |
| 4013493 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 46.0 | 2.92e-01 | 93.1% | 30.1% |
| 3283891 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.53 | 37.0 | 3.72e-01 | 75.0% | 70.7% |
| 3924808 | 719.2.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like | 0.53 | 37.0 | 3.66e-01 | 76.4% | 85.0% |
| 3218646 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 37.0 | 3.90e-01 | 73.6% | 96.9% |
| 3851482 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 44.0 | 2.93e-01 | 97.2% | 47.9% |
| 3969907 | 2003.6.1.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin | 0.52 | 39.0 | 2.79e-01 | 86.1% | 91.5% |
| 5029476 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.51 | 43.0 | 3.34e-01 | 100.0% | 82.2% |
| 3856611 | 1170.1.1.1 ↗ | beta barrels › IL8-related › IL8-related › IL8 › IL8 | 0.51 | 36.0 | 3.80e-01 | 84.7% | 85.7% |
| 4049072 | 2.4.1.6 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal | 0.50 | 36.0 | 3.16e-01 | 76.4% | 61.8% |
| 3240493 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.50 | 43.0 | 2.98e-01 | 100.0% | 54.4% |
D2
high
residues 83-134
Domain cluster:
rep: OQ680478.1__WGG14292.1__X__00138__D1-57
CATH (86)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4y85C01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.73 | 49.0 | 3.71e-01 | 71.2% | 63.7% |
| 3n8hA02 | 3.30.1300.10 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain | 0.72 | 54.0 | 4.78e-01 | 88.5% | 55.3% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.72 | 60.0 | 4.75e-01 | 96.2% | 94.6% |
| 4cy8A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 53.0 | 3.38e-01 | 80.8% | 56.9% |
| 2cudA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.71 | 56.0 | 4.82e-01 | 84.6% | 68.4% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 63.0 | 5.63e-01 | 100.0% | 91.7% |
| 2xlpB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.69 | 52.0 | 3.17e-01 | 82.7% | 43.8% |
| 5evhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.69 | 57.0 | 4.44e-01 | 96.2% | 84.3% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 58.0 | 4.99e-01 | 92.3% | 73.8% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.69 | 58.0 | 4.64e-01 | 96.2% | 72.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 57.0 | 5.05e-01 | 90.4% | 69.9% |
| 3ecfA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 55.0 | 4.28e-01 | 96.2% | 81.2% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.68 | 55.0 | 4.15e-01 | 96.2% | 73.0% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.67 | 56.0 | 4.61e-01 | 96.2% | 75.5% |
| 3s5wA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.67 | 58.0 | 3.41e-01 | 98.1% | 38.8% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 53.0 | 4.11e-01 | 96.2% | 78.0% |
| 3fvqA03 | 2.40.50.470 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.66 | 46.0 | 4.45e-01 | 73.1% | 72.4% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 54.0 | 4.06e-01 | 96.2% | 63.1% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.66 | 45.0 | 4.11e-01 | 71.2% | 56.3% |
| 3o4hA01 | 2.130.10.150 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain | 0.66 | 56.0 | 3.48e-01 | 96.2% | 23.7% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.66 | 49.0 | 4.78e-01 | 78.8% | 91.1% |
| 2ivdB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.66 | 49.0 | 3.49e-01 | 82.7% | 48.8% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 55.0 | 4.42e-01 | 96.2% | 71.2% |
| 2qa1A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 49.0 | 3.09e-01 | 82.7% | 47.8% |
| 3u1wA01 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 53.0 | 3.74e-01 | 96.2% | 48.1% |
| 4tm3A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 52.0 | 3.12e-01 | 92.3% | 38.9% |
| 2jaeA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 49.0 | 3.35e-01 | 82.7% | 45.9% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 53.0 | 4.14e-01 | 96.2% | 61.0% |
| 5xilA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 54.0 | 4.10e-01 | 96.2% | 59.4% |
| 2r0cA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 51.0 | 3.32e-01 | 90.4% | 47.5% |
| 5cqfA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 52.0 | 3.10e-01 | 92.3% | 38.4% |
| 1g29102 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 44.0 | 4.72e-01 | 73.1% | 100.0% |
| 7ne4A01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.64 | 54.0 | 3.35e-01 | 96.2% | 22.2% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.64 | 50.0 | 4.95e-01 | 84.6% | 83.3% |
| 2i4lB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 52.0 | 4.30e-01 | 96.2% | 76.2% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 51.0 | 3.88e-01 | 96.2% | 63.6% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 55.0 | 5.10e-01 | 98.1% | 89.4% |
| 3kewB02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.62 | 50.0 | 3.72e-01 | 92.3% | 91.7% |
| 1ebdA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 53.0 | 4.09e-01 | 98.1% | 90.1% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.62 | 43.0 | 3.96e-01 | 73.1% | 76.1% |
| 6aonA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 53.0 | 4.06e-01 | 98.1% | 89.4% |
| 1qf6A02 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.61 | 48.0 | 3.97e-01 | 92.3% | 83.0% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 41.0 | 3.28e-01 | 71.2% | 36.0% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 51.0 | 3.90e-01 | 96.2% | 58.1% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.61 | 43.0 | 3.61e-01 | 76.9% | 66.0% |
| 3g12B00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.60 | 44.0 | 3.47e-01 | 80.8% | 36.3% |
| 4c12A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.60 | 44.0 | 2.94e-01 | 82.7% | 45.8% |
| 1azpA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 43.0 | 3.99e-01 | 76.9% | 75.8% |
| 4l5tB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 42.0 | 3.52e-01 | 75.0% | 74.7% |
| 2qcuB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 47.0 | 3.16e-01 | 92.3% | 56.8% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 45.0 | 4.20e-01 | 80.8% | 89.1% |
| 5bukB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 48.0 | 2.84e-01 | 92.3% | 39.2% |
| 3lzwA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 49.0 | 3.83e-01 | 98.1% | 87.4% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.58 | 46.0 | 3.66e-01 | 92.3% | 47.0% |
| 1e8cA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.58 | 42.0 | 2.83e-01 | 82.7% | 46.2% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.58 | 45.0 | 3.67e-01 | 90.4% | 43.6% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 43.0 | 4.12e-01 | 82.7% | 88.5% |
| 7pjjA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 43.0 | 3.25e-01 | 80.8% | 80.0% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 40.0 | 4.19e-01 | 73.1% | 100.0% |
| 6ka3A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.57 | 46.0 | 3.52e-01 | 100.0% | 81.6% |
| 3zl8A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.57 | 45.0 | 2.94e-01 | 84.6% | 87.2% |
| 2rk0A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.57 | 45.0 | 3.54e-01 | 90.4% | 85.1% |
| 4bubA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.57 | 42.0 | 2.83e-01 | 82.7% | 43.9% |
| 1uhzA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 41.0 | 3.51e-01 | 76.9% | 70.8% |
| 3nuhB03 | 3.10.20.690 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 45.0 | 3.92e-01 | 94.2% | 67.4% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.57 | 46.0 | 4.16e-01 | 94.2% | 81.3% |
| 1y56A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 44.0 | 2.95e-01 | 90.4% | 44.6% |
| 2ivwA01 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 47.0 | 4.19e-01 | 100.0% | 82.5% |
| 8f5dA05 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.56 | 40.0 | 2.78e-01 | 82.7% | 47.1% |
| 4g6xA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 45.0 | 3.58e-01 | 100.0% | 87.6% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.55 | 45.0 | 2.90e-01 | 92.3% | 32.1% |
| 1x3zA04 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.55 | 39.0 | 3.94e-01 | 75.0% | 98.1% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 45.0 | 3.49e-01 | 100.0% | 94.1% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 45.0 | 3.64e-01 | 100.0% | 64.9% |
| 4azpA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 44.0 | 3.44e-01 | 100.0% | 92.5% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.53 | 42.0 | 3.47e-01 | 92.3% | 47.6% |
| 3u12A00 | 2.30.29.180 | Mainly Beta › Roll › PH-domain like › Ubiquitin carboxyl-terminal hydrolase 26/29/37, pleckstrin homology-like domain | 0.52 | 35.0 | 2.90e-01 | 71.2% | 40.4% |
| 1qypA00 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 37.0 | 3.60e-01 | 75.0% | 80.7% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.52 | 39.0 | 2.66e-01 | 92.3% | 19.6% |
| 1jc4A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 40.0 | 3.08e-01 | 94.2% | 50.3% |
| 4huzA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 42.0 | 3.16e-01 | 100.0% | 42.4% |
| 1fgsA01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.51 | 40.0 | 2.60e-01 | 90.4% | 73.2% |
| 3r4rA02 | 2.60.40.2590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 3.31e-01 | 100.0% | 90.4% |
| 3a8uX01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 43.0 | 3.13e-01 | 100.0% | 52.5% |
| 3bdlA02 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 37.0 | 2.81e-01 | 84.6% | 72.1% |
| 4p78C00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.51 | 41.0 | 3.92e-01 | 98.1% | 97.0% |
ECOD (91)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4163844 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.74 | 62.0 | 5.13e-01 | 96.2% | 78.9% |
| 5014686 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.72 | 58.0 | 5.72e-01 | 90.4% | 92.7% |
| 4297683 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.72 | 53.0 | 3.11e-01 | 80.8% | 37.5% |
| 1835868 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.71 | 52.0 | 3.59e-01 | 80.8% | 86.3% |
| 3415181 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.70 | 53.0 | 3.29e-01 | 82.7% | 45.2% |
| 1949057 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.70 | 57.0 | 4.47e-01 | 96.2% | 86.1% |
| 3697881 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.69 | 51.0 | 3.00e-01 | 80.8% | 37.8% |
| 2595099 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.69 | 51.0 | 3.44e-01 | 80.8% | 82.0% |
| 3973131 | 2003.1.3.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain | 0.69 | 57.0 | 3.35e-01 | 92.3% | 38.4% |
| 4675886 | 2003.1.3.8 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Mqo | 0.69 | 51.0 | 2.96e-01 | 80.8% | 46.2% |
| 5037678 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.69 | 52.0 | 3.11e-01 | 82.7% | 37.6% |
| 4873705 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.69 | 54.0 | 4.05e-01 | 86.5% | 97.7% |
| 4082860 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.69 | 51.0 | 3.18e-01 | 80.8% | 46.6% |
| 3738641 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.68 | 58.0 | 5.19e-01 | 96.2% | 76.0% |
| None | — | 0.68 | 50.0 | 2.92e-01 | 80.8% | 46.8% | |
| 4497830 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.68 | 55.0 | 3.77e-01 | 92.3% | 82.6% |
| 5045245 | 2003.1.3.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Pyr_redox_2 | 0.68 | 50.0 | 3.40e-01 | 80.8% | 52.3% |
| 3730229 | 4.1.1.102 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_3 | 0.68 | 59.0 | 5.23e-01 | 98.1% | 77.3% |
| 4988847 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.67 | 55.0 | 4.94e-01 | 94.2% | 81.3% |
| 4483443 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.67 | 50.0 | 3.16e-01 | 82.7% | 49.8% |
| 1171961 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.67 | 54.0 | 5.13e-01 | 92.3% | 82.5% |
| 4974423 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.67 | 50.0 | 2.97e-01 | 80.8% | 34.9% |
| 1140832 | 809.2.1.1 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like › PepSY_like | 0.67 | 53.0 | 5.15e-01 | 92.3% | 86.7% |
| None | — | 0.67 | 54.0 | 3.28e-01 | 92.3% | 30.7% | |
| 3319421 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.67 | 49.0 | 4.98e-01 | 78.8% | 96.0% |
| 4436471 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.67 | 50.0 | 3.95e-01 | 80.8% | 53.3% |
| 3281618 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.66 | 57.0 | 4.63e-01 | 98.1% | 75.0% |
| 4245071 | 2003.1.2.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.66 | 52.0 | 3.24e-01 | 86.5% | 47.0% |
| 4325086 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.66 | 51.0 | 4.02e-01 | 80.8% | 53.4% |
| 5014688 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 52.0 | 5.16e-01 | 92.3% | 94.5% |
| 5026951 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.66 | 46.0 | 3.44e-01 | 73.1% | 88.8% |
| 4955327 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 53.0 | 5.31e-01 | 92.3% | 98.2% |
| 3317787 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 48.0 | 4.92e-01 | 78.8% | 96.0% |
| 4983934 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.66 | 53.0 | 3.75e-01 | 92.3% | 82.4% |
| 3222248 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.66 | 53.0 | 3.66e-01 | 92.3% | 57.4% |
| 1260456 | 283.1.1.3 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase | 0.66 | 54.0 | 4.71e-01 | 94.2% | 59.8% |
| 4278307 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.66 | 54.0 | 3.71e-01 | 92.3% | 72.1% |
| 3303020 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 47.0 | 4.78e-01 | 76.9% | 94.0% |
| 3598363 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.65 | 52.0 | 3.23e-01 | 92.3% | 31.8% |
| 3930954 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.65 | 55.0 | 4.72e-01 | 96.2% | 78.8% |
| 3699766 | 2003.1.2.58 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 | 0.65 | 53.0 | 3.21e-01 | 92.3% | 30.9% |
| 5013360 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.65 | 49.0 | 3.98e-01 | 80.8% | 55.8% |
| 1688900 | 2003.1.2.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lys_Orn_oxgnase | 0.65 | 52.0 | 3.71e-01 | 92.3% | 92.5% |
| 5079181 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.65 | 51.0 | 3.74e-01 | 92.3% | 81.9% |
| 4991489 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.65 | 53.0 | 4.91e-01 | 96.2% | 90.0% |
| 5004691 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.64 | 51.0 | 3.52e-01 | 90.4% | 54.9% |
| 3837990 | 3675.1.1.0 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain | 0.64 | 50.0 | 3.84e-01 | 92.3% | 35.4% |
| 4958447 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.64 | 50.0 | 3.61e-01 | 90.4% | 63.6% |
| 5047395 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.64 | 52.0 | 4.23e-01 | 96.2% | 90.9% |
| 3508531 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.64 | 51.0 | 5.21e-01 | 90.4% | 94.0% |
| 4209421 | 2003.1.2.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FMO-like,NAD_binding_8 | 0.64 | 51.0 | 3.18e-01 | 90.4% | 46.2% |
| 3811857 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.64 | 52.0 | 3.15e-01 | 92.3% | 30.2% |
| 3273270 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.64 | 51.0 | 3.38e-01 | 96.2% | 38.4% |
| None | — | 0.63 | 50.0 | 3.20e-01 | 90.4% | 48.2% | |
| 5078994 | 2003.1.2.300 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GGR_cat | 0.63 | 51.0 | 3.08e-01 | 92.3% | 36.4% |
| None | — | 0.63 | 51.0 | 3.38e-01 | 90.4% | 40.0% | |
| 4315674 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.63 | 52.0 | 4.36e-01 | 96.2% | 76.8% |
| 4030194 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.63 | 53.0 | 3.23e-01 | 98.1% | 30.0% |
| 4948812 | 2003.1.2.297 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_dim | 0.63 | 50.0 | 3.00e-01 | 90.4% | 22.1% |
| 4466588 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.63 | 49.0 | 3.65e-01 | 90.4% | 72.7% |
| 3969301 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.63 | 50.0 | 3.79e-01 | 90.4% | 85.4% |
| 4399060 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.62 | 50.0 | 3.58e-01 | 92.3% | 91.5% |
| 4034029 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.62 | 54.0 | 4.11e-01 | 98.1% | 87.2% |
| 3284625 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.62 | 49.0 | 2.94e-01 | 90.4% | 37.8% |
| 3421095 | 3521.1.1.4 ↗ | a+b three layers › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › Polymerase basic protein 2 cap-binding domain › SWIM | 0.62 | 43.0 | 3.68e-01 | 75.0% | 72.2% |
| 5035761 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.62 | 48.0 | 3.25e-01 | 88.5% | 49.3% |
| 3281458 | 2003.1.3.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › Lys_Orn_oxgnase | 0.62 | 52.0 | 3.12e-01 | 98.1% | 38.6% |
| 5040072 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.62 | 49.0 | 3.42e-01 | 90.4% | 56.8% |
| 4031833 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.61 | 50.0 | 4.86e-01 | 96.2% | 100.0% |
| 2426852 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.61 | 51.0 | 3.60e-01 | 92.3% | 29.4% |
| 4941640 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.61 | 50.0 | 3.64e-01 | 94.2% | 42.6% |
| 3831908 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.61 | 52.0 | 3.94e-01 | 98.1% | 85.4% |
| 4639808 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.61 | 50.0 | 4.23e-01 | 94.2% | 84.4% |
| 3164388 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.60 | 46.0 | 4.24e-01 | 80.8% | 89.2% |
| 4047622 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.60 | 46.0 | 3.56e-01 | 80.8% | 52.7% |
| 4497266 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.60 | 46.0 | 3.58e-01 | 82.7% | 55.3% |
| 4046713 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.60 | 48.0 | 4.14e-01 | 94.2% | 84.4% |
| 4192943 | 2003.1.2.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox | 0.60 | 51.0 | 3.91e-01 | 98.1% | 83.2% |
| 4371408 | 309.1.2.1 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_SAD | 0.60 | 47.0 | 3.29e-01 | 92.3% | 76.0% |
| 4178103 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.59 | 46.0 | 3.39e-01 | 92.3% | 95.0% |
| 3588565 | 6048.1.1.1 ↗ | a+b two layers › DUF960-like › DUF960-like › DUF960-like › DUF960 | 0.58 | 47.0 | 4.03e-01 | 92.3% | 55.7% |
| 4929353 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.58 | 47.0 | 2.91e-01 | 96.2% | 55.1% |
| 4991274 | 218.4.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain › DUF4213 | 0.58 | 43.0 | 3.61e-01 | 82.7% | 86.3% |
| 5045968 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.58 | 41.0 | 2.46e-01 | 90.4% | 8.9% |
| 3655368 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 43.0 | 3.97e-01 | 90.4% | 84.0% |
| 3722093 | 211.1.1.11 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase_6 | 0.56 | 43.0 | 3.44e-01 | 94.2% | 48.5% |
| 4116346 | 3675.1.1.0 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain | 0.55 | 46.0 | 3.35e-01 | 100.0% | 63.1% |
| 3479661 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 37.0 | 2.98e-01 | 76.9% | 50.9% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.52 | 42.0 | 3.88e-01 | 100.0% | 92.0% |
| 3932751 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.50 | 37.0 | 2.98e-01 | 92.3% | 35.4% |
| 3778417 | 2007.5.1.21 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › NXPE4_C | 0.50 | 37.0 | 2.36e-01 | 80.8% | 58.0% |
D3
high
residues 286-385
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 27.7 | 4.50e-06 | 97.0% | 84.7% |
| PF13455.13 | MUG113 | 26.6 | 9.70e-06 | 83.0% | 84.9% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jg5A00 | 3.30.1410.10 | Alpha Beta › 2-Layer Sandwich › Gtp Cyclohydrolase I Feedback Regulatory Protein; Chain: K › GTP cyclohydrolase I feedback regulatory protein GFRP | 0.60 | 38.0 | 4.12e-01 | 100.0% | 77.1% |
| 5l6gA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.59 | 45.0 | 3.48e-01 | 81.0% | 77.7% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.58 | 38.0 | 3.36e-01 | 100.0% | 45.5% |
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.57 | 43.0 | 4.56e-01 | 85.0% | 87.8% |
| 3en9A03 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 40.0 | 4.55e-01 | 85.0% | 100.0% |
| 1vmbA00 | 3.30.70.60 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B | 0.56 | 41.0 | 4.05e-01 | 78.0% | 91.6% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.55 | 44.0 | 4.68e-01 | 85.0% | 98.9% |
| 4gc8B00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.51 | 41.0 | 3.44e-01 | 87.0% | 64.9% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4016088 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.81 | 75.0 | 7.41e-01 | 100.0% | 96.2% |
| 3740549 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.81 | 74.0 | 6.44e-01 | 100.0% | 80.4% |
| 3197583 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.77 | 71.0 | 5.63e-01 | 100.0% | 78.8% |
| 3698242 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.77 | 68.0 | 6.32e-01 | 100.0% | 77.2% |
| 3735748 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.76 | 70.0 | 5.78e-01 | 100.0% | 60.0% |
| 4995671 | 3115.1.1.12 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › PF30567 | 0.68 | 35.0 | 4.72e-01 | 100.0% | 100.0% |
| 3390562 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.67 | 38.0 | 4.43e-01 | 91.0% | 78.6% |
| 4990791 | 821.1.1.4 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › DUF123 | 0.66 | 58.0 | 5.49e-01 | 97.0% | 98.3% |
| 3669930 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 48.0 | 5.18e-01 | 100.0% | 94.1% |
| 3400462 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.63 | 33.0 | 4.10e-01 | 81.0% | 86.2% |
| 3894181 | 101.1.2.115 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDC27 | 0.59 | 38.0 | 3.19e-01 | 100.0% | 37.1% |
| 4541077 | 3767.1.1.0 ↗ | a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain | 0.59 | 43.0 | 3.87e-01 | 77.0% | 90.0% |
| 3321071 | 101.1.2.115 ↗ | alpha arrays › HTH › HTH › winged helix domain › CDC27 | 0.59 | 37.0 | 3.34e-01 | 100.0% | 45.0% |
| 5075473 | 241.6.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Arp2/3 complex subunits › Arp2/3 complex subunits › ARPC4 | 0.54 | 41.0 | 3.52e-01 | 97.0% | 49.4% |
| 3716774 | 306.5.1.2 ↗ | a+b two layers › Glucose permease domain IIB-like › GTP cyclohydrolase I feedback regulatory protein, GFRP › GTP cyclohydrolase I feedback regulatory protein, GFRP › PF28980 | 0.52 | 40.0 | 3.84e-01 | 99.0% | 72.2% |
| 3201557 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 46.0 | 3.62e-01 | 100.0% | 61.0% |
| 4076311 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.51 | 36.0 | 3.13e-01 | 79.0% | 47.1% |
| 4237289 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.50 | 44.0 | 3.31e-01 | 99.0% | 49.2% |
D4
medium
residues 149-209
Domain cluster:
rep: MK962753.1__QEG05484.1__JK32_00173__00173__D183-240
CATH (73)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1f8wA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.75 | 52.0 | 3.73e-01 | 72.1% | 47.3% |
| 4eqsA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.75 | 53.0 | 3.75e-01 | 73.8% | 47.6% |
| 3icsA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.74 | 52.0 | 3.59e-01 | 73.8% | 54.9% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.72 | 54.0 | 4.16e-01 | 80.3% | 42.7% |
| 3iwaA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.70 | 50.0 | 3.66e-01 | 73.8% | 44.6% |
| 6nhiA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.70 | 52.0 | 4.66e-01 | 78.7% | 85.7% |
| 1df0A02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.70 | 54.0 | 4.69e-01 | 83.6% | 66.3% |
| 5x68A00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.69 | 49.0 | 3.00e-01 | 73.8% | 41.9% |
| 3oc4B01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 48.0 | 3.38e-01 | 73.8% | 48.9% |
| 1wu7A03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.67 | 56.0 | 4.83e-01 | 93.4% | 85.6% |
| 2i4lB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.67 | 53.0 | 4.51e-01 | 86.9% | 78.2% |
| 4wi1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.67 | 59.0 | 4.72e-01 | 100.0% | 73.2% |
| 2yvtA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.67 | 46.0 | 3.07e-01 | 73.8% | 94.1% |
| 2q5iA03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.67 | 55.0 | 4.44e-01 | 93.4% | 75.2% |
| 1nj1A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.66 | 57.0 | 4.76e-01 | 95.1% | 76.9% |
| 4ks7A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.66 | 46.0 | 3.97e-01 | 73.8% | 82.7% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.66 | 46.0 | 4.99e-01 | 73.8% | 88.5% |
| 5ygbA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 49.0 | 4.46e-01 | 78.7% | 75.0% |
| 1qe0A02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 50.0 | 4.39e-01 | 83.6% | 84.6% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 49.0 | 4.50e-01 | 82.0% | 81.5% |
| 1atiB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 54.0 | 4.45e-01 | 93.4% | 77.7% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 50.0 | 5.14e-01 | 83.6% | 98.3% |
| 1adjB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 55.0 | 4.79e-01 | 95.1% | 81.9% |
| 2j3lA01 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.65 | 55.0 | 4.50e-01 | 95.1% | 69.9% |
| 1httA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 53.0 | 4.58e-01 | 93.4% | 81.6% |
| 5e3iA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.64 | 54.0 | 4.65e-01 | 95.1% | 83.8% |
| 3fxzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 45.0 | 3.90e-01 | 75.4% | 82.7% |
| 2a6mA00 | 3.30.70.1290 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transposase IS200-like | 0.63 | 48.0 | 3.77e-01 | 82.0% | 39.2% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.63 | 53.0 | 3.46e-01 | 91.8% | 29.9% |
| 3netB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.63 | 56.0 | 4.78e-01 | 100.0% | 81.6% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.63 | 43.0 | 4.64e-01 | 72.1% | 96.1% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 46.0 | 4.39e-01 | 78.7% | 74.0% |
| 2fpeA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.63 | 42.0 | 4.25e-01 | 70.5% | 87.1% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.62 | 47.0 | 4.44e-01 | 83.6% | 81.3% |
| 1g5hB02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.62 | 55.0 | 4.58e-01 | 100.0% | 86.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 46.0 | 4.35e-01 | 80.3% | 69.9% |
| 1ykdB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.61 | 44.0 | 3.18e-01 | 80.3% | 74.6% |
| 6vlfA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 41.0 | 4.21e-01 | 70.5% | 93.1% |
| 2gnxA02 | 3.30.450.240 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.61 | 43.0 | 3.57e-01 | 75.4% | 96.3% |
| 1uv7A00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.60 | 43.0 | 4.08e-01 | 77.0% | 97.4% |
| 3ntkA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 44.0 | 4.06e-01 | 78.7% | 65.0% |
| 8hmcA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 49.0 | 3.12e-01 | 91.8% | 20.6% |
| 2laeA00 | 3.30.310.170 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC | 0.60 | 52.0 | 4.25e-01 | 100.0% | 72.9% |
| 2lezA00 | 3.30.2450.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 | 0.59 | 43.0 | 3.55e-01 | 80.3% | 45.8% |
| 2lssA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 40.0 | 3.85e-01 | 70.5% | 84.3% |
| 1kafA00 | 3.90.1150.20 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Transcription regulator MotA, C-terminal domain | 0.58 | 46.0 | 4.00e-01 | 95.1% | 94.4% |
| 1efzA00 | 3.20.20.105 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Queuine tRNA-ribosyltransferase-like | 0.58 | 38.0 | 2.40e-01 | 75.4% | 11.3% |
| 5c3vA01 | 3.30.800.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase II Beta › Phosphatidylinositol Phosphate Kinase II Beta | 0.58 | 43.0 | 3.27e-01 | 83.6% | 99.4% |
| 3ghjA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 48.0 | 4.01e-01 | 96.7% | 88.8% |
| 3dmqA07 | 3.30.360.80 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.58 | 44.0 | 4.21e-01 | 86.9% | 91.9% |
| 3t4nA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.57 | 47.0 | 4.24e-01 | 100.0% | 80.2% |
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 46.0 | 2.86e-01 | 91.8% | 19.5% |
| 5ic7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 47.0 | 2.93e-01 | 91.8% | 21.5% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 48.0 | 3.29e-01 | 100.0% | 98.3% |
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.57 | 39.0 | 3.28e-01 | 75.4% | 40.7% |
| 5hkeA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.56 | 43.0 | 2.75e-01 | 83.6% | 84.7% |
| 1sp8C02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 41.0 | 2.90e-01 | 80.3% | 30.8% |
| 2pn2A00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 42.0 | 3.27e-01 | 82.0% | 44.5% |
| 7x4lC02 | 3.90.1150.160 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.56 | 47.0 | 3.83e-01 | 100.0% | 80.5% |
| 2vnuD04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 45.0 | 4.19e-01 | 91.8% | 89.9% |
| 1gofA02 | 2.130.10.80 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Galactose oxidase/kelch, beta-propeller | 0.55 | 43.0 | 2.72e-01 | 90.2% | 23.5% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.55 | 42.0 | 3.85e-01 | 88.5% | 82.0% |
| 4l6wB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.54 | 44.0 | 3.35e-01 | 98.4% | 96.6% |
| 3zi1A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 44.0 | 3.49e-01 | 96.7% | 75.9% |
| 1n27A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 46.0 | 4.06e-01 | 100.0% | 78.1% |
| 8a9xA01 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.53 | 44.0 | 4.19e-01 | 95.1% | 88.0% |
| 1wyuA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 46.0 | 3.79e-01 | 100.0% | 74.6% |
| 2pimA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.53 | 43.0 | 3.45e-01 | 91.8% | 93.9% |
| 2yh6D00 | 3.30.530.50 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.53 | 42.0 | 3.56e-01 | 91.8% | 76.4% |
| 1q67A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 40.0 | 3.25e-01 | 90.2% | 80.7% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.51 | 40.0 | 3.60e-01 | 91.8% | 67.0% |
| 1va0B02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.51 | 43.0 | 3.41e-01 | 93.4% | 50.8% |
| 1zy9A03 | 2.60.40.2760 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 33.0 | 3.63e-01 | 72.1% | 100.0% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5049486 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.74 | 53.0 | 3.69e-01 | 73.8% | 48.3% |
| 4943596 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.74 | 53.0 | 3.71e-01 | 73.8% | 49.7% |
| 4307428 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.74 | 52.0 | 3.59e-01 | 73.8% | 54.4% |
| 161180 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.74 | 52.0 | 4.10e-01 | 73.8% | 89.3% |
| 1269798 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.74 | 51.0 | 3.96e-01 | 72.1% | 84.1% |
| 5061122 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.73 | 52.0 | 3.58e-01 | 73.8% | 52.8% |
| 4489788 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.73 | 62.0 | 5.28e-01 | 95.1% | 87.0% |
| 4439755 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.72 | 62.0 | 5.29e-01 | 96.7% | 88.0% |
| 3588167 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.71 | 63.0 | 5.27e-01 | 100.0% | 84.8% |
| 4122293 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.71 | 59.0 | 5.06e-01 | 93.4% | 86.0% |
| 4947286 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.70 | 57.0 | 4.67e-01 | 90.2% | 73.9% |
| 3672445 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 50.0 | 3.76e-01 | 75.4% | 39.3% |
| 4640921 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.70 | 56.0 | 4.83e-01 | 86.9% | 80.6% |
| 4607181 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.70 | 55.0 | 4.79e-01 | 86.9% | 80.0% |
| 4969848 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.69 | 56.0 | 4.53e-01 | 90.2% | 66.7% |
| 5055270 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.69 | 51.0 | 3.25e-01 | 78.7% | 25.2% |
| 5039886 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.69 | 55.0 | 4.83e-01 | 86.9% | 83.3% |
| 4286529 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.69 | 54.0 | 4.80e-01 | 86.9% | 83.3% |
| 4091319 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.68 | 54.0 | 4.59e-01 | 85.2% | 75.5% |
| 5032252 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 47.0 | 5.02e-01 | 72.1% | 98.0% |
| 3359784 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 52.0 | 5.09e-01 | 80.3% | 81.5% |
| 4121236 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.68 | 54.0 | 4.76e-01 | 86.9% | 84.3% |
| 3922679 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.68 | 51.0 | 5.53e-01 | 78.7% | 100.0% |
| 3627869 | 4.1.1.347 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 | 0.68 | 50.0 | 3.71e-01 | 78.7% | 37.4% |
| 3594326 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.68 | 51.0 | 4.79e-01 | 85.2% | 92.5% |
| 4075769 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.68 | 50.0 | 5.27e-01 | 78.7% | 96.4% |
| 3628870 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.68 | 50.0 | 4.10e-01 | 78.7% | 49.1% |
| 4119319 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.67 | 47.0 | 2.80e-01 | 73.8% | 33.5% |
| 5011457 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.67 | 58.0 | 4.99e-01 | 95.1% | 85.3% |
| 5013051 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.67 | 54.0 | 4.29e-01 | 90.2% | 43.8% |
| 3625247 | 241.15.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain | 0.67 | 56.0 | 4.71e-01 | 96.7% | 97.3% |
| 5049592 | 2005.1.1.17 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f | 0.66 | 52.0 | 3.33e-01 | 85.2% | 32.2% |
| 4142693 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.66 | 52.0 | 4.60e-01 | 86.9% | 87.8% |
| 5072682 | 101.8.1.4 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f | 0.66 | 49.0 | 2.88e-01 | 80.3% | 14.0% |
| 5033313 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.66 | 57.0 | 4.85e-01 | 96.7% | 83.8% |
| 4279058 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.66 | 56.0 | 4.91e-01 | 93.4% | 84.4% |
| 4381486 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.66 | 52.0 | 4.66e-01 | 88.5% | 88.6% |
| 5079099 | 101.8.1.4 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1f | 0.66 | 50.0 | 2.90e-01 | 82.0% | 17.9% |
| 4978135 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 56.0 | 4.28e-01 | 96.7% | 42.8% |
| 3606615 | 241.10.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › GAS2 domain › GAS2 domain | 0.65 | 54.0 | 4.81e-01 | 95.1% | 94.4% |
| 4477176 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.65 | 52.0 | 4.65e-01 | 86.9% | 82.4% |
| 4949939 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 55.0 | 4.22e-01 | 96.7% | 40.7% |
| 3612284 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 54.0 | 4.24e-01 | 95.1% | 68.1% |
| 4370920 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 55.0 | 4.70e-01 | 95.1% | 77.0% |
| 4592227 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.65 | 55.0 | 3.38e-01 | 95.1% | 19.7% |
| 4928458 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 55.0 | 4.83e-01 | 95.1% | 85.6% |
| 3708593 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 45.0 | 3.67e-01 | 72.1% | 73.9% |
| 4048026 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.65 | 57.0 | 4.95e-01 | 100.0% | 87.4% |
| 5061701 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 58.0 | 4.90e-01 | 100.0% | 83.0% |
| 5031046 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.64 | 53.0 | 4.52e-01 | 93.4% | 99.0% |
| 5079765 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 56.0 | 4.75e-01 | 100.0% | 81.0% |
| 4069569 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 54.0 | 4.64e-01 | 95.1% | 80.8% |
| 4510149 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 55.0 | 4.65e-01 | 95.1% | 81.0% |
| 4472981 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.64 | 54.0 | 4.62e-01 | 95.1% | 79.8% |
| 4556597 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 54.0 | 4.77e-01 | 95.1% | 85.6% |
| 4942580 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.64 | 49.0 | 4.49e-01 | 86.9% | 91.8% |
| 3405627 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 46.0 | 3.99e-01 | 77.0% | 56.8% |
| 4375036 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.64 | 56.0 | 4.77e-01 | 100.0% | 81.0% |
| 3489459 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.63 | 51.0 | 4.20e-01 | 90.2% | 77.4% |
| 4958343 | 101.1.2.70 ↗ | alpha arrays › HTH › HTH › winged helix domain › PqqD | 0.63 | 46.0 | 4.10e-01 | 78.7% | 88.9% |
| 4286008 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 56.0 | 4.76e-01 | 100.0% | 83.0% |
| 3507364 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 55.0 | 4.57e-01 | 100.0% | 79.1% |
| 4238930 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 55.0 | 4.71e-01 | 100.0% | 88.0% |
| 4297095 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 52.0 | 4.44e-01 | 95.1% | 76.2% |
| 4157435 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 55.0 | 4.69e-01 | 100.0% | 84.0% |
| 4979299 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.63 | 53.0 | 4.33e-01 | 95.1% | 67.8% |
| 4336817 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.63 | 55.0 | 4.77e-01 | 100.0% | 88.4% |
| 4352252 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 56.0 | 4.85e-01 | 100.0% | 84.9% |
| 5048260 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 51.0 | 3.93e-01 | 96.7% | 38.7% |
| 4110889 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.62 | 55.0 | 4.58e-01 | 100.0% | 81.9% |
| 5079456 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.62 | 51.0 | 3.62e-01 | 90.2% | 35.6% |
| 4595963 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.61 | 51.0 | 4.44e-01 | 95.1% | 82.1% |
| 4559432 | 331.3.1.8 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Lipoprotein_18 | 0.61 | 51.0 | 4.09e-01 | 95.1% | 71.2% |
| 4982249 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.60 | 51.0 | 4.50e-01 | 100.0% | 71.6% |
| 5073123 | 2008.5.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Uncharacterized protein AF_2093 C-terminal domain › Uncharacterized protein AF_2093 C-terminal domain › DUF6834_C | 0.60 | 48.0 | 3.82e-01 | 93.4% | 80.7% |
| 4991248 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 49.0 | 3.50e-01 | 95.1% | 93.2% |
| 3172618 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.60 | 51.0 | 4.34e-01 | 95.1% | 71.0% |
| 3336463 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 49.0 | 4.52e-01 | 90.2% | 74.4% |
| 4559431 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.60 | 45.0 | 3.14e-01 | 83.6% | 49.1% |
| 4394756 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 51.0 | 4.42e-01 | 100.0% | 80.0% |
| 3720304 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 42.0 | 4.47e-01 | 80.3% | 92.0% |
| 3525406 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.59 | 51.0 | 4.16e-01 | 95.1% | 71.8% |
| 5032068 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 49.0 | 4.24e-01 | 95.1% | 80.0% |
| 4981304 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 49.0 | 4.18e-01 | 100.0% | 75.2% |
| 3738030 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.56 | 39.0 | 3.12e-01 | 73.8% | 35.6% |
| 4973219 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.55 | 37.0 | 2.88e-01 | 70.5% | 27.7% |
| 4571673 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.55 | 46.0 | 3.42e-01 | 100.0% | 59.4% |
| 3646226 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.54 | 40.0 | 3.74e-01 | 82.0% | 90.0% |
| 4236828 | 331.22.1.2 ↗ | a+b two layers › TBP-like › Outer membrane protein assembly factor BamC › Outer membrane protein assembly factor BamC › PF29358 | 0.54 | 45.0 | 3.29e-01 | 100.0% | 42.1% |
| 4018780 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.54 | 45.0 | 3.58e-01 | 100.0% | 90.0% |
D5
medium
residues 218-268
Domain cluster:
rep: MW218148.1__QPI16946.1__X__00027__D239-305
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05265.21 best | DUF723 | 31.9 | 1.90e-07 | 100.0% | 76.2% |