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MG592562.1__AUR94287.1__NVP1193O_156__00156
Bact-VirMG592562.1__AUR94287.1__NVP1193O_156__00156
Identity
- Accession:
- MG592562 ↗
- Kingdom:
- phage
Quality
76.9
mean pLDDT
Taxonomy
TaxID: 1881436
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-50
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6wshA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 53.0 | 5.13e-01 | 72.0% | 69.1% |
| 1s8nA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 52.0 | 4.95e-01 | 72.0% | 65.5% |
| 7eebI01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.73 | 49.0 | 3.36e-01 | 70.0% | 20.7% |
| 3t57A02 | 1.20.1180.10 | Mainly Alpha › Up-down Bundle › Udp N-acetylglucosamine O-acyltransferase; Domain 2 › Udp N-acetylglucosamine O-acyltransferase, C-terminal domain | 0.73 | 62.0 | 5.46e-01 | 100.0% | 65.3% |
| 2oyoA01 | 1.20.5.810 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › AhpD-like | 0.72 | 42.0 | 4.16e-01 | 78.0% | 55.8% |
| 3emuA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.70 | 56.0 | 4.06e-01 | 100.0% | 31.2% |
| 2keoA00 | 3.10.120.10 | Alpha Beta › Roll › Flavocytochrome B2; Chain A, domain 1 › Cytochrome b5-like heme/steroid binding domain | 0.67 | 50.0 | 4.12e-01 | 82.0% | 46.7% |
| 2g6zA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.67 | 53.0 | 3.84e-01 | 100.0% | 30.6% |
| 2esbA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.66 | 58.0 | 4.07e-01 | 100.0% | 63.6% |
| 1vioA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.66 | 47.0 | 4.48e-01 | 76.0% | 67.2% |
| 2va8A03 | 1.10.3380.30 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › | 0.65 | 57.0 | 3.72e-01 | 100.0% | 25.2% |
| 7tm7B01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.65 | 54.0 | 3.18e-01 | 96.0% | 20.0% |
| 1kskA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.65 | 46.0 | 4.24e-01 | 76.0% | 59.1% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.64 | 46.0 | 3.91e-01 | 76.0% | 76.8% |
| 1qusA01 | 1.10.8.350 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Bacterial muramidase | 0.64 | 43.0 | 3.37e-01 | 70.0% | 48.7% |
| 4ki9A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.63 | 54.0 | 3.84e-01 | 100.0% | 51.6% |
| 8ctsB01 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.62 | 43.0 | 3.69e-01 | 76.0% | 77.0% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.53 | 40.0 | 4.10e-01 | 100.0% | 91.5% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3357244 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.82 | 57.0 | 4.41e-01 | 84.0% | 35.2% |
| 3289310 | 103.12.1.1 ↗ | alpha arrays › RuvA-C › ANTAR domain › ANTAR domain › ANTAR | 0.80 | 54.0 | 5.22e-01 | 70.0% | 69.1% |
| 4988961 | 129.1.1.16 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD_binding_11 | 0.77 | 63.0 | 4.72e-01 | 100.0% | 37.1% |
| 3640423 | 304.48.1.21 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Thg1,Thg1C | 0.76 | 47.0 | 2.92e-01 | 70.0% | 11.9% |
| 3216945 | 101.1.1.102 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Lin-8 | 0.74 | 61.0 | 4.60e-01 | 100.0% | 38.2% |
| 5007693 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.70 | 57.0 | 4.39e-01 | 100.0% | 40.0% |
| 3394054 | 2002.1.1.96 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans | 0.69 | 48.0 | 2.87e-01 | 72.0% | 37.8% |
| 3756243 | 101.1.2.19 ↗ | alpha arrays › HTH › HTH › winged helix domain › Topoisom_bac | 0.69 | 48.0 | 3.69e-01 | 76.0% | 32.5% |
| 5039660 | 2004.1.1.22 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat | 0.68 | 54.0 | 3.30e-01 | 86.0% | 15.6% |
| 3519552 | 2002.1.1.96 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › S-methyl_trans | 0.68 | 49.0 | 3.05e-01 | 76.0% | 45.3% |
| 4967413 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.67 | 58.0 | 4.37e-01 | 100.0% | 61.6% |
| 5066144 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.65 | 55.0 | 4.32e-01 | 100.0% | 66.1% |
| 3801470 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.65 | 40.0 | 4.07e-01 | 70.0% | 62.0% |
| 4596379 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.65 | 54.0 | 4.91e-01 | 100.0% | 70.0% |
| 5032990 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.63 | 51.0 | 4.70e-01 | 98.0% | 68.6% |
| 5010441 | 5060.2.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain | 0.63 | 54.0 | 4.11e-01 | 96.0% | 45.2% |
| 4112281 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.60 | 45.0 | 4.45e-01 | 98.0% | 81.8% |
| 5012854 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.59 | 49.0 | 3.90e-01 | 100.0% | 71.3% |
| 5027452 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 3.10e-01 | 82.0% | 93.5% |
| 4281410 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.58 | 44.0 | 4.25e-01 | 100.0% | 73.8% |
| 3196340 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 50.0 | 3.26e-01 | 98.0% | 23.0% |
| 5040698 | 7000.1.1.0 ↗ | alpha arrays › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS › inserted region in the C-terminal domain of the archeal LeuRS | 0.57 | 45.0 | 4.35e-01 | 100.0% | 81.7% |
| 5080212 | 2004.1.1.188 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cytidylate_kin2 | 0.55 | 45.0 | 3.09e-01 | 96.0% | 62.1% |
| None | — | 0.52 | 42.0 | 3.03e-01 | 100.0% | 65.9% |