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MG592568.1__AUR94791.1__NVP1198B_03__00003
Bact-VirMG592568.1__AUR94791.1__NVP1198B_03__00003
Identity
- Accession:
- MG592568 ↗
- Kingdom:
- phage
Quality
73.8
mean pLDDT
Taxonomy
TaxID: 1881258
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-60
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7e0wA01 | 3.40.525.10 | Alpha Beta › 3-Layer(aba) Sandwich › Phosphatidylinositol Transfer Protein Sec14p › CRAL-TRIO lipid binding domain | 0.66 | 55.0 | 4.20e-01 | 98.2% | 37.6% |
| 2fbhA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 44.0 | 3.36e-01 | 75.4% | 66.4% |
| 4alzA01 | 3.30.1340.30 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › | 0.62 | 41.0 | 4.09e-01 | 93.0% | 64.5% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 42.0 | 3.24e-01 | 73.7% | 58.9% |
| 2jugA01 | 1.10.10.1830 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Non-ribosomal peptide synthase, adenylation domain | 0.59 | 48.0 | 4.93e-01 | 98.2% | 96.4% |
| 3llcA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 48.0 | 3.21e-01 | 100.0% | 31.0% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.57 | 32.0 | 3.25e-01 | 89.5% | 52.6% |
| 4oxwA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 39.0 | 3.19e-01 | 71.9% | 79.2% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 3.04e-01 | 80.7% | 72.0% |
| 2bm0A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.56 | 34.0 | 3.62e-01 | 100.0% | 68.6% |
| 2dqlA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 39.0 | 3.20e-01 | 75.4% | 93.0% |
| 2xzmG00 | 1.10.455.10 | Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5 | 0.55 | 42.0 | 2.96e-01 | 84.2% | 51.0% |
| 2ebnA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 45.0 | 2.98e-01 | 98.2% | 24.6% |
| 2dsyD00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 37.0 | 3.42e-01 | 73.7% | 98.8% |
| 4bwxA03 | 1.10.287.3700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 37.0 | 3.45e-01 | 73.7% | 95.0% |
| 6k8nA01 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 45.0 | 3.39e-01 | 98.2% | 98.1% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.53 | 44.0 | 4.42e-01 | 100.0% | 91.2% |
| 2i87A03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 35.0 | 3.33e-01 | 100.0% | 53.4% |
| 4ewfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.53 | 45.0 | 2.98e-01 | 100.0% | 90.7% |
| 1tzlA02 | 3.30.1920.50 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › | 0.53 | 41.0 | 4.09e-01 | 100.0% | 83.9% |
| 2gmhA03 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 38.0 | 3.33e-01 | 80.7% | 46.9% |
| 4mbsA00 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.53 | 39.0 | 2.52e-01 | 86.0% | 77.2% |
| 6eziA00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.52 | 38.0 | 3.41e-01 | 100.0% | 54.7% |
| 3aafA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 44.0 | 3.61e-01 | 100.0% | 61.5% |
| 4fuqC01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.50 | 35.0 | 2.18e-01 | 77.2% | 44.1% |
| 6ncvA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.50 | 36.0 | 3.21e-01 | 80.7% | 94.5% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3946654 | 517.2.1.0 ↗ | beta barrels › CBF-like › TraF › TraF | 0.75 | 51.0 | 3.25e-01 | 75.4% | 14.5% |
| 4992389 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.67 | 45.0 | 3.80e-01 | 70.2% | 42.1% |
| 3604748 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 47.0 | 3.22e-01 | 78.9% | 58.1% |
| 3986170 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 48.0 | 3.05e-01 | 84.2% | 46.2% |
| 3272035 | 109.21.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nup96 | 0.62 | 53.0 | 3.06e-01 | 100.0% | 58.4% |
| 3932590 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 47.0 | 2.74e-01 | 100.0% | 9.2% |
| 4991742 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.62 | 45.0 | 3.58e-01 | 80.7% | 73.8% |
| 3290652 | 306.2.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor | 0.60 | 49.0 | 4.40e-01 | 100.0% | 96.7% |
| 5015087 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.59 | 51.0 | 3.38e-01 | 100.0% | 61.2% |
| 4934384 | 101.1.2.947 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27234 | 0.59 | 48.0 | 4.38e-01 | 100.0% | 78.8% |
| 3971712 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.59 | 47.0 | 3.68e-01 | 91.2% | 90.8% |
| 3628572 | 101.1.2.148 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC5_C | 0.58 | 40.0 | 3.27e-01 | 75.4% | 84.8% |
| 4940345 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.58 | 42.0 | 3.41e-01 | 86.0% | 80.7% |
| 4649222 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.58 | 41.0 | 3.19e-01 | 100.0% | 33.1% |
| 4980177 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.57 | 39.0 | 3.17e-01 | 71.9% | 65.0% |
| 4968065 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 41.0 | 3.05e-01 | 100.0% | 28.4% |
| 3736195 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.57 | 48.0 | 2.90e-01 | 100.0% | 38.0% |
| 4934352 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.57 | 39.0 | 2.91e-01 | 75.4% | 50.9% |
| 3936217 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.56 | 46.0 | 2.68e-01 | 100.0% | 9.8% |
| 3176170 | 109.4.1.1369 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MA3, MIF4G | 0.56 | 46.0 | 2.66e-01 | 96.5% | 14.0% |
| 3183587 | 101.1.2.281 ↗ | alpha arrays › HTH › HTH › winged helix domain › Tfb2 | 0.55 | 40.0 | 2.68e-01 | 100.0% | 19.6% |
| 3764595 | 109.4.1.554 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Neurochondrin | 0.54 | 44.0 | 2.77e-01 | 98.2% | 19.5% |
| 3400082 | 101.1.2.109 ↗ | alpha arrays › HTH › HTH › winged helix domain › Rio2_N | 0.54 | 40.0 | 3.44e-01 | 82.5% | 94.0% |
| 3397315 | 603.2.1.12 ↗ | alpha bundles › STAT-like › STAT › STAT › 7tm_7 | 0.54 | 44.0 | 2.76e-01 | 98.2% | 44.2% |
| 5050732 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 38.0 | 3.02e-01 | 75.4% | 79.2% |
| 3732352 | 601.39.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › Enhancer of filamentation 1 › Enhancer of filamentation 1 › DUF3433 | 0.54 | 37.0 | 2.68e-01 | 71.9% | 65.1% |
| 3578274 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.53 | 43.0 | 2.75e-01 | 96.5% | 88.4% |
| 3878887 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.53 | 39.0 | 2.56e-01 | 80.7% | 42.0% |
| 3933800 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.53 | 43.0 | 2.69e-01 | 100.0% | 16.1% |
| 3589191 | 142.1.1.10 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › HTH_16 | 0.53 | 40.0 | 3.79e-01 | 82.5% | 91.4% |
| 3262946 | 101.1.2.381 ↗ | alpha arrays › HTH › HTH › winged helix domain › UBR1-like_wing | 0.53 | 39.0 | 3.42e-01 | 84.2% | 82.1% |
| 3743176 | 167.1.1.1 ↗ | alpha arrays › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal protein S7 › Ribosomal_S7 | 0.53 | 43.0 | 3.17e-01 | 89.5% | 52.4% |
| 5035739 | 2484.1.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin | 0.52 | 42.0 | 2.62e-01 | 100.0% | 63.4% |
| 4028388 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.52 | 43.0 | 2.79e-01 | 96.5% | 84.8% |
| 3782635 | 3837.1.1.1 ↗ | alpha bundles › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › Uncharacterized conserved protein Dip1984 › DUF6847 | 0.52 | 35.0 | 2.64e-01 | 73.7% | 26.5% |
| 3932471 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.52 | 43.0 | 2.72e-01 | 100.0% | 48.2% |
| 3256533 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.52 | 41.0 | 2.39e-01 | 100.0% | 7.5% |
| 3226923 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.52 | 45.0 | 2.76e-01 | 100.0% | 58.6% |
| 3846092 | 109.4.1.554 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Neurochondrin | 0.51 | 40.0 | 2.36e-01 | 100.0% | 10.9% |
| 3213821 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 40.0 | 2.35e-01 | 91.2% | 47.1% |
| 3941026 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.51 | 43.0 | 3.04e-01 | 100.0% | 29.7% |
| 3970671 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.51 | 35.0 | 3.16e-01 | 93.0% | 54.7% |
| None | — | 0.50 | 39.0 | 2.31e-01 | 100.0% | 29.0% |