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MG592575.1__AUR95343.1__NVP1205O_68__00068
Bact-VirMG592575.1__AUR95343.1__NVP1205O_68__00068
Identity
- Accession:
- MG592575 ↗
- Kingdom:
- phage
Quality
76.3
mean pLDDT
Taxonomy
TaxID: 1881451
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 153-301
Domain cluster:
rep: Flagellar_motor_rotation_protein_MotB__YP_009352811__Kaumoebavirus_Viruses.__X__D1-135_263-308
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4iloA00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.88 | 61.0 | 5.07e-01 | 70.5% | 44.9% |
| 3vkgA12 | 1.10.287.2610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.87 | 80.0 | 6.90e-01 | 95.3% | 67.9% |
| 2b5uA02 | 1.10.287.620 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins | 0.85 | 61.0 | 5.95e-01 | 76.5% | 67.7% |
| 3na7A00 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.85 | 60.0 | 5.01e-01 | 71.8% | 45.6% |
| 3cazB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.85 | 61.0 | 5.34e-01 | 73.2% | 53.3% |
| 3k29A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.84 | 74.0 | 7.19e-01 | 91.9% | 85.1% |
| 6tqfA01 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.81 | 57.0 | 4.06e-01 | 71.1% | 27.4% |
| 3qweA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.80 | 66.0 | 5.38e-01 | 86.6% | 53.1% |
| 7aalA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.79 | 69.0 | 5.54e-01 | 91.3% | 60.2% |
| 3pltA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.78 | 56.0 | 4.92e-01 | 73.8% | 58.4% |
| 5y06A01 | 1.10.287.1490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 57.0 | 4.80e-01 | 75.8% | 48.5% |
| 3qa8A04 | 1.20.1270.250 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.77 | 58.0 | 4.90e-01 | 82.6% | 49.4% |
| 6xj1A01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 68.0 | 5.69e-01 | 94.0% | 60.4% |
| 2q12A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 57.0 | 4.82e-01 | 77.2% | 49.2% |
| 1x04A00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 56.0 | 5.04e-01 | 75.2% | 58.5% |
| 4wpeA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.75 | 62.0 | 5.03e-01 | 87.9% | 64.4% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.75 | 57.0 | 6.21e-01 | 79.9% | 100.0% |
| 4mh6A00 | 1.10.287.1700 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.75 | 60.0 | 5.89e-01 | 83.9% | 79.9% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.75 | 54.0 | 4.94e-01 | 73.8% | 62.2% |
| 3r6nA02 | 1.20.58.1060 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 44.0 | 4.36e-01 | 70.5% | 57.4% |
| 2efkA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.72 | 63.0 | 5.18e-01 | 93.3% | 60.7% |
| 7p3rA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.72 | 64.0 | 4.98e-01 | 97.3% | 53.5% |
| 1fewA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 50.0 | 4.79e-01 | 71.8% | 62.4% |
| 2ch7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.70 | 59.0 | 4.67e-01 | 91.3% | 44.3% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.70 | 56.0 | 4.61e-01 | 85.9% | 50.6% |
| 5j1gA00 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 50.0 | 4.33e-01 | 73.8% | 50.0% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.69 | 54.0 | 4.83e-01 | 81.2% | 59.3% |
| 8i3jA01 | 1.20.920.20 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.69 | 54.0 | 4.48e-01 | 80.5% | 85.7% |
| 1ciiA01 | 1.20.250.10 | Mainly Alpha › Up-down Bundle › Colicin Ia; domain 1 › Colicin Ia, domain 1 | 0.68 | 63.0 | 4.72e-01 | 98.7% | 50.3% |
| 4dylA01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.68 | 60.0 | 5.08e-01 | 98.0% | 57.6% |
| 1qu7A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.68 | 58.0 | 5.03e-01 | 91.3% | 60.4% |
| 4wpcA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.66 | 60.0 | 4.84e-01 | 98.7% | 55.8% |
| 3g67A00 | 1.10.287.950 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein | 0.62 | 53.0 | 4.68e-01 | 91.3% | 64.3% |
| 4nqiD00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.59 | 50.0 | 4.33e-01 | 92.6% | 58.6% |
ECOD (66)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3696922 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.93 | 63.0 | 6.29e-01 | 74.5% | 68.0% |
| 4428739 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.90 | 86.0 | 6.88e-01 | 100.0% | 58.1% |
| 3723606 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.89 | 67.0 | 4.60e-01 | 77.9% | 25.8% |
| 3927148 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.89 | 64.0 | 5.48e-01 | 73.2% | 85.1% |
| 4676422 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.88 | 68.0 | 6.36e-01 | 83.2% | 66.9% |
| 4214119 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.88 | 61.0 | 4.81e-01 | 70.5% | 42.5% |
| 3825161 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.88 | 68.0 | 5.45e-01 | 79.2% | 47.3% |
| 4950969 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.88 | 81.0 | 5.46e-01 | 96.0% | 36.4% |
| 5031890 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.88 | 62.0 | 5.12e-01 | 78.5% | 44.1% |
| 3712648 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.87 | 73.0 | 6.62e-01 | 87.2% | 68.4% |
| 4086322 | 5086.1.1.205 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PF30209 | 0.87 | 70.0 | 6.72e-01 | 84.6% | 75.2% |
| 4994979 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.86 | 60.0 | 5.47e-01 | 71.1% | 87.9% |
| 3763261 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.86 | 74.0 | 6.37e-01 | 89.9% | 62.3% |
| 3381175 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.86 | 73.0 | 6.10e-01 | 88.6% | 58.3% |
| 4775818 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 60.0 | 5.46e-01 | 71.8% | 56.8% |
| 3299419 | 5086.1.1.126 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › PPI_helical | 0.85 | 68.0 | 6.34e-01 | 82.6% | 72.8% |
| 4106959 | 4177.1.1.120 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PF29569 | 0.85 | 69.0 | 6.17e-01 | 83.2% | 64.6% |
| 3707204 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.85 | 79.0 | 6.16e-01 | 97.3% | 65.1% |
| 4930606 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.85 | 75.0 | 5.52e-01 | 92.6% | 43.7% |
| 5082443 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.85 | 68.0 | 6.89e-01 | 81.9% | 84.8% |
| 4993050 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.85 | 72.0 | 6.31e-01 | 89.9% | 62.9% |
| 3737723 | 4177.1.1.5 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Vps5 | 0.85 | 69.0 | 6.01e-01 | 83.9% | 61.0% |
| 3368865 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.84 | 61.0 | 5.58e-01 | 73.2% | 60.3% |
| 5047072 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.84 | 61.0 | 5.92e-01 | 89.3% | 68.8% |
| 1171038 | 3755.3.1.148 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CT398_CC | 0.84 | 55.0 | 4.96e-01 | 75.2% | 51.8% |
| 3661727 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.84 | 60.0 | 5.29e-01 | 73.2% | 86.3% |
| 3627942 | 3755.4.1.1 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › PI3K_P85_iSH2 | 0.83 | 61.0 | 5.76e-01 | 75.2% | 64.6% |
| 3615982 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.83 | 58.0 | 4.30e-01 | 74.5% | 31.2% |
| 3167394 | 874.1.1.0 ↗ | a+b duplicates or obligate multimers › Smc hinge domain › Smc hinge domain › Smc hinge domain | 0.83 | 78.0 | 6.35e-01 | 100.0% | 63.8% |
| 4939828 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.82 | 77.0 | 5.80e-01 | 100.0% | 44.8% |
| 3239667 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.82 | 57.0 | 3.55e-01 | 70.5% | 15.5% |
| 3538954 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.81 | 60.0 | 4.72e-01 | 75.2% | 44.3% |
| 5020818 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.80 | 72.0 | 4.89e-01 | 94.6% | 72.4% |
| 5076398 | 3834.1.1.0 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain | 0.80 | 69.0 | 4.60e-01 | 91.9% | 24.9% |
| 3801867 | 3755.1.1.0 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related | 0.80 | 57.0 | 4.94e-01 | 72.5% | 75.3% |
| 3248488 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.79 | 63.0 | 5.06e-01 | 82.6% | 58.9% |
| 3608336 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.79 | 56.0 | 5.32e-01 | 71.8% | 64.7% |
| 4024105 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.79 | 70.0 | 5.64e-01 | 94.6% | 53.5% |
| 3695585 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 63.0 | 5.59e-01 | 83.2% | 77.1% |
| 3713604 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 67.0 | 5.11e-01 | 89.9% | 67.1% |
| 3256420 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.78 | 69.0 | 5.61e-01 | 94.6% | 53.0% |
| 4163282 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.78 | 57.0 | 5.18e-01 | 74.5% | 61.6% |
| 4315070 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.77 | 54.0 | 5.05e-01 | 70.5% | 60.0% |
| 4230460 | 2004.1.1.429 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 | 0.76 | 68.0 | 4.33e-01 | 96.6% | 29.0% |
| 3205388 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.76 | 67.0 | 5.68e-01 | 95.3% | 58.7% |
| 3932987 | 4177.1.1.10 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH | 0.76 | 68.0 | 5.63e-01 | 100.0% | 55.1% |
| 3168919 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.76 | 68.0 | 5.39e-01 | 94.6% | 60.7% |
| 3788782 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.75 | 63.0 | 4.29e-01 | 89.3% | 46.8% |
| 2832211 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.75 | 69.0 | 5.51e-01 | 100.0% | 52.3% |
| 4145109 | 3922.1.1.264 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › PF30340 | 0.75 | 62.0 | 4.73e-01 | 89.3% | 86.7% |
| 3616483 | 3755.3.1.280 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Spindly | 0.75 | 69.0 | 5.44e-01 | 99.3% | 58.3% |
| 3894262 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.75 | 67.0 | 5.29e-01 | 100.0% | 47.9% |
| 4988623 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.74 | 70.0 | 5.64e-01 | 99.3% | 63.4% |
| 3379082 | 2004.1.1.433 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 | 0.74 | 60.0 | 3.88e-01 | 83.9% | 51.1% |
| 4302780 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 53.0 | 4.14e-01 | 90.6% | 36.1% |
| 3532384 | 4177.1.1.10 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH | 0.73 | 56.0 | 4.53e-01 | 80.5% | 43.2% |
| 4032017 | 2004.1.1.301 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_27 | 0.73 | 65.0 | 4.23e-01 | 94.6% | 66.9% |
| 3239971 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.72 | 53.0 | 4.59e-01 | 88.6% | 49.1% |
| 3169346 | 2004.1.1.1043 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Phe_tRNA-synt_N | 0.72 | 58.0 | 3.97e-01 | 84.6% | 59.2% |
| 3849009 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.72 | 62.0 | 5.13e-01 | 92.6% | 53.5% |
| 4537898 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.69 | 62.0 | 4.97e-01 | 98.7% | 51.2% |
| 5007128 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.67 | 58.0 | 4.46e-01 | 95.3% | 89.7% |
| 5036915 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.65 | 53.0 | 4.38e-01 | 86.6% | 88.1% |
| 4112797 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.63 | 55.0 | 4.92e-01 | 89.3% | 68.2% |
| 3944917 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.63 | 53.0 | 4.61e-01 | 89.9% | 61.8% |
| 3923562 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.58 | 51.0 | 3.68e-01 | 96.6% | 67.6% |
D2
medium
residues 10-64
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 54.0 | 5.37e-01 | 85.5% | 76.3% |
| 3mvpA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 53.0 | 5.64e-01 | 83.6% | 97.9% |
| 3u1dB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 57.0 | 4.22e-01 | 92.7% | 55.9% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 54.0 | 5.13e-01 | 92.7% | 73.1% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 57.0 | 5.54e-01 | 94.5% | 88.5% |
| 2ia0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 53.0 | 5.42e-01 | 92.7% | 90.7% |
| 2wa0A01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.68 | 56.0 | 4.73e-01 | 100.0% | 56.4% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.67 | 52.0 | 4.63e-01 | 85.5% | 73.4% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 49.0 | 5.05e-01 | 83.6% | 90.0% |
| 2dbbB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 52.0 | 5.25e-01 | 90.9% | 89.1% |
| 5gp9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.67 | 49.0 | 5.14e-01 | 81.8% | 93.8% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 49.0 | 4.85e-01 | 87.3% | 76.7% |
| 2ns0A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 56.0 | 5.00e-01 | 100.0% | 65.5% |
| 2fd5A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 49.0 | 5.12e-01 | 83.6% | 95.8% |
| 2e7xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 49.0 | 5.03e-01 | 90.9% | 92.3% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 45.0 | 4.30e-01 | 85.5% | 64.5% |
| 1vhnA02 | 1.10.1200.80 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 | 0.63 | 48.0 | 4.51e-01 | 85.5% | 94.4% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 47.0 | 4.34e-01 | 87.3% | 61.8% |
| 2hgkA01 | 1.20.1440.40 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › YqcC-like | 0.62 | 42.0 | 3.44e-01 | 70.9% | 98.1% |
| 6el2B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.61 | 48.0 | 4.96e-01 | 94.5% | 100.0% |
| 3tl4X02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.61 | 51.0 | 4.76e-01 | 100.0% | 88.9% |
| 3g2eB00 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.61 | 50.0 | 3.62e-01 | 100.0% | 29.7% |
| 2ca5A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 41.0 | 3.99e-01 | 83.6% | 62.9% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.60 | 42.0 | 3.66e-01 | 81.8% | 47.1% |
| 3tjtA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.60 | 44.0 | 4.10e-01 | 80.0% | 88.7% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 43.0 | 4.12e-01 | 87.3% | 68.8% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 48.0 | 3.50e-01 | 94.5% | 94.4% |
| 2btqB03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.58 | 40.0 | 4.15e-01 | 80.0% | 77.4% |
| 4ye6A02 | 1.10.10.2420 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 46.0 | 4.58e-01 | 94.5% | 100.0% |
| 3m03B00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 48.0 | 4.11e-01 | 100.0% | 56.8% |
| 1grjA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.57 | 43.0 | 3.88e-01 | 80.0% | 91.9% |
| 1z82B02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.56 | 44.0 | 3.44e-01 | 92.7% | 65.2% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 44.0 | 4.02e-01 | 96.4% | 79.3% |
| 2da4A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.55 | 44.0 | 4.29e-01 | 98.2% | 84.8% |
| 1kmiZ02 | 1.10.287.500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.55 | 43.0 | 3.22e-01 | 85.5% | 35.8% |
| 5mmjo00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.53 | 45.0 | 4.07e-01 | 96.4% | 85.3% |
| 4lqqB00 | 1.20.140.30 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › MOB kinase activator | 0.53 | 44.0 | 3.33e-01 | 98.2% | 76.0% |
| 1rsoB00 | 1.10.287.650 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › L27 domain | 0.53 | 36.0 | 3.60e-01 | 80.0% | 71.4% |
| 5ab0C04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.52 | 46.0 | 2.87e-01 | 100.0% | 31.0% |
| 2vm6A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.52 | 45.0 | 3.39e-01 | 100.0% | 43.8% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.52 | 43.0 | 4.09e-01 | 98.2% | 85.3% |
| 1owaA02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 43.0 | 3.56e-01 | 96.4% | 81.1% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4544555 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 58.0 | 4.54e-01 | 96.4% | 40.0% |
| 4940480 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 59.0 | 5.92e-01 | 98.2% | 96.4% |
| 3647798 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 60.0 | 5.73e-01 | 98.2% | 92.3% |
| 3898882 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 60.0 | 4.82e-01 | 98.2% | 79.1% |
| 4030134 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.71 | 57.0 | 4.32e-01 | 94.5% | 37.0% |
| 3672635 | 101.1.1.295 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_70 | 0.69 | 57.0 | 5.32e-01 | 100.0% | 77.3% |
| 3727217 | 101.1.2.384 ↗ | alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 | 0.68 | 54.0 | 5.58e-01 | 96.4% | 100.0% |
| 3280565 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 51.0 | 5.30e-01 | 89.1% | 94.0% |
| 3625144 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 55.0 | 5.22e-01 | 96.4% | 84.3% |
| 4061170 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.68 | 54.0 | 5.47e-01 | 96.4% | 89.1% |
| 3896790 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 55.0 | 5.03e-01 | 100.0% | 72.0% |
| 5029950 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 49.0 | 5.00e-01 | 92.7% | 87.3% |
| 3663947 | 101.35.1.23 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate | 0.64 | 51.0 | 5.22e-01 | 87.3% | 98.1% |
| 3462297 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 44.0 | 4.02e-01 | 85.5% | 53.3% |
| 5014572 | 2.21.1.3 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 | 0.63 | 56.0 | 4.01e-01 | 100.0% | 49.7% |
| 3646179 | 4030.1.1.20 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › Ovate | 0.63 | 50.0 | 5.04e-01 | 87.3% | 96.4% |
| 3303808 | 605.8.1.4 ↗ | alpha duplicates or obligate multimers › ROP-like › BAS1536-like › BAS1536-like › Ovate | 0.62 | 49.0 | 4.92e-01 | 87.3% | 96.4% |
| 4937939 | 1075.1.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 | 0.62 | 46.0 | 3.18e-01 | 83.6% | 44.4% |
| 3586880 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.62 | 47.0 | 4.72e-01 | 98.2% | 85.5% |
| 3737948 | 101.1.17.2 ↗ | alpha arrays › HTH › HTH › FF domain › FF | 0.61 | 51.0 | 5.06e-01 | 100.0% | 98.3% |
| 4929285 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.59 | 42.0 | 3.98e-01 | 85.5% | 63.1% |
| 3543272 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.59 | 39.0 | 4.17e-01 | 89.1% | 86.7% |
| 3691061 | 101.1.1.216 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_8 | 0.59 | 45.0 | 4.52e-01 | 90.9% | 90.9% |
| 3686518 | 101.1.2.384 ↗ | alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 | 0.58 | 46.0 | 4.62e-01 | 94.5% | 94.5% |
| 3640877 | 101.1.2.627 ↗ | alpha arrays › HTH › HTH › winged helix domain › Ovate | 0.58 | 47.0 | 4.76e-01 | 96.4% | 100.0% |
| 3590854 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.58 | 44.0 | 3.72e-01 | 83.6% | 84.2% |
| 3496388 | 176.1.1.0 ↗ | alpha arrays › Annexin › Annexin › Annexin | 0.58 | 45.0 | 3.91e-01 | 98.2% | 53.7% |
| 3707287 | 101.1.17.0 ↗ | alpha arrays › HTH › HTH › FF domain | 0.57 | 47.0 | 4.66e-01 | 100.0% | 90.0% |
| 3262218 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.57 | 43.0 | 3.29e-01 | 100.0% | 33.1% |
| 4030256 | 603.2.1.0 ↗ | alpha bundles › STAT-like › STAT › STAT | 0.57 | 45.0 | 3.74e-01 | 85.5% | 71.6% |
| 3326008 | 5086.1.1.96 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF632 | 0.54 | 43.0 | 3.51e-01 | 85.5% | 47.0% |
| 3591989 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.54 | 42.0 | 2.94e-01 | 94.5% | 78.7% |
| 3814771 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.51 | 41.0 | 3.54e-01 | 87.3% | 97.6% |