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MG592578.1__AUR95538.1__NVP1208B_50__00050

Bact-Vir

MG592578.1__AUR95538.1__NVP1208B_50__00050

Identity

Accession:
MG592578 ↗
Kingdom:
phage

Quality

73.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zobellviridae› Vibrio_phage_1.208.B._10N.222.52.A7

TaxID: 1881437

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-80
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.90 58.0 6.28e-01 81.3% 76.9%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.88 80.0 6.74e-01 100.0% 61.5%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.88 66.0 7.38e-01 98.7% 100.0%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 57.0 5.90e-01 82.7% 74.6%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 60.0 6.50e-01 86.7% 90.3%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 59.0 6.71e-01 88.0% 98.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.83 59.0 5.98e-01 90.7% 75.3%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 60.0 6.05e-01 97.3% 77.6%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.80 74.0 5.08e-01 100.0% 38.0%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.80 61.0 4.99e-01 88.0% 45.9%
4ft4B01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.79 74.0 5.74e-01 100.0% 62.7%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.78 72.0 5.72e-01 100.0% 62.8%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 64.0 5.62e-01 92.0% 61.1%
4dovA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.77 70.0 5.45e-01 100.0% 65.6%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 53.0 5.81e-01 80.0% 90.3%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 52.0 5.59e-01 77.3% 88.7%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 55.0 5.00e-01 93.3% 61.5%
3pfsB00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 61.0 4.99e-01 89.3% 66.9%
1m4zA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.71 64.0 4.73e-01 100.0% 61.7%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.71 57.0 5.79e-01 85.3% 97.3%
1ixdA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.71 61.0 5.42e-01 93.3% 74.0%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.68 52.0 5.23e-01 85.3% 81.3%
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.68 54.0 4.83e-01 94.7% 61.5%
2vgmA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.68 56.0 4.79e-01 90.7% 69.7%
1vwxZ00 2.30.30.770 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 4.65e-01 92.0% 59.3%
3agjF01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.66 55.0 4.65e-01 92.0% 72.4%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.66 54.0 4.80e-01 90.7% 65.1%
4dm5A00 3.30.1450.10 Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › 0.64 43.0 4.12e-01 100.0% 59.8%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 48.0 4.99e-01 93.3% 87.1%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 43.0 4.76e-01 78.7% 88.1%
1jqpA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.62 55.0 3.95e-01 100.0% 95.2%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 48.0 4.93e-01 93.3% 90.4%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 4.79e-01 92.0% 89.9%
3tw6D02 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.58 41.0 4.16e-01 88.0% 73.7%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 45.0 4.09e-01 82.7% 85.9%
8a8gA01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.58 41.0 3.35e-01 74.7% 69.3%
2jqjA01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.53 46.0 3.86e-01 97.3% 80.8%
1yliB00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.53 44.0 3.58e-01 94.7% 70.3%
4bf3A00 2.30.31.50 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F 0.52 40.0 3.42e-01 85.3% 88.0%
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 37.0 4.05e-01 100.0% 91.9%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.51 40.0 3.61e-01 86.7% 71.7%
ECOD (89)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3572423 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.89 81.0 6.75e-01 100.0% 60.0%
3486329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.85 67.0 7.17e-01 96.0% 95.4%
4024915 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.85 67.0 7.13e-01 97.3% 95.4%
4644007 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.84 56.0 6.31e-01 81.3% 88.1%
4354770 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.84 59.0 6.15e-01 85.3% 78.6%
4300449 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.84 57.0 6.14e-01 81.3% 81.5%
4977206 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.83 55.0 6.08e-01 92.0% 85.0%
3473981 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.82 72.0 5.93e-01 93.3% 72.8%
3612090 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.82 60.0 6.63e-01 90.7% 95.0%
None — 0.81 76.0 5.52e-01 100.0% 48.9%
3940730 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 63.0 5.76e-01 92.0% 64.2%
3830813 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.81 76.0 5.50e-01 100.0% 49.7%
3264808 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.81 66.0 6.86e-01 98.7% 92.9%
3496040 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.81 75.0 5.73e-01 100.0% 56.9%
5058103 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.81 57.0 5.97e-01 85.3% 80.9%
3584109 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 73.0 5.83e-01 100.0% 75.7%
3661142 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.80 74.0 5.55e-01 100.0% 52.9%
3309829 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 74.0 5.63e-01 100.0% 56.2%
3327160 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.79 74.0 5.68e-01 100.0% 58.1%
3645842 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.79 60.0 5.88e-01 80.0% 75.0%
3401387 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.79 73.0 5.41e-01 100.0% 48.3%
3177469 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.78 59.0 6.09e-01 80.0% 85.7%
3676628 4.1.1.162 ↗ beta barrels › SH3 › SH3 › SH3 › DUF502 0.78 58.0 4.96e-01 80.0% 50.0%
3404643 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 62.0 6.47e-01 97.3% 91.4%
3991229 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.77 71.0 5.41e-01 100.0% 56.4%
3550248 4.1.1.12 ↗ beta barrels › SH3 › SH3 › SH3 › PWWP 0.77 56.0 5.02e-01 82.7% 57.0%
3521904 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 71.0 6.49e-01 100.0% 89.5%
4944596 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.77 63.0 5.30e-01 89.3% 66.4%
3617741 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 69.0 4.99e-01 100.0% 44.9%
3493367 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.76 70.0 5.13e-01 100.0% 49.7%
3499940 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 70.0 5.26e-01 100.0% 54.1%
3650798 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 64.0 5.50e-01 90.7% 76.5%
3683487 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.75 68.0 5.06e-01 97.3% 49.7%
3232054 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.75 58.0 5.24e-01 88.0% 61.0%
3791777 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.75 59.0 5.69e-01 84.0% 87.1%
2978978 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.75 64.0 6.41e-01 96.0% 90.7%
5012425 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.75 63.0 5.05e-01 90.7% 61.4%
3571487 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 6.37e-01 100.0% 91.8%
3926950 4.1.1.214 ↗ beta barrels › SH3 › SH3 › SH3 › GCN5L1 0.74 58.0 4.88e-01 82.7% 62.5%
3812766 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.74 63.0 6.51e-01 96.0% 97.1%
3519884 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.74 68.0 6.11e-01 100.0% 92.0%
4060846 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 63.0 5.78e-01 92.0% 94.7%
3688959 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.74 68.0 4.82e-01 100.0% 45.2%
4422252 4.1.1.455 ↗ beta barrels › SH3 › SH3 › SH3 › DSRB 0.73 56.0 6.16e-01 82.7% 100.0%
4015757 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 62.0 4.44e-01 92.0% 41.9%
3272197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.44e-01 90.7% 73.3%
3631313 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.72 62.0 4.54e-01 93.3% 42.1%
4954224 4.1.1.182 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2097 0.72 61.0 5.61e-01 92.0% 76.8%
4013811 4.8.1.22 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.71 61.0 5.75e-01 93.3% 86.7%
3934278 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.34e-01 94.7% 61.7%
3406338 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.71 62.0 5.27e-01 93.3% 68.7%
4645408 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.71 64.0 4.63e-01 100.0% 47.8%
3205559 4.8.1.22 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.71 58.0 4.66e-01 89.3% 57.9%
4976092 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 58.0 5.49e-01 93.3% 74.4%
3464303 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.71 65.0 5.05e-01 100.0% 95.5%
3615426 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.71 59.0 4.68e-01 90.7% 64.7%
3188394 4.8.1.22 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF7025 0.71 61.0 5.17e-01 93.3% 70.8%
3185466 4.1.1.225 ↗ beta barrels › SH3 › SH3 › SH3 › DUF7025 0.71 60.0 4.38e-01 93.3% 39.0%
4171942 4.1.1.178 ↗ beta barrels › SH3 › SH3 › SH3 › ribosomal_L24 0.71 63.0 5.54e-01 94.7% 71.2%
3213653 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.70 53.0 5.21e-01 80.0% 95.0%
3297966 4.25.1.2 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › BRWD_AD 0.70 59.0 5.02e-01 92.0% 84.2%
3253267 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 5.60e-01 90.7% 82.4%
3342228 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.70 64.0 4.85e-01 100.0% 92.4%
3447797 4.25.1.0 ↗ beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain 0.69 64.0 4.99e-01 100.0% 90.0%
3998386 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.69 62.0 5.31e-01 97.3% 68.7%
4997059 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.69 55.0 5.59e-01 92.0% 88.0%
3504709 4.1.1.4 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L27e 0.68 58.0 4.71e-01 92.0% 59.3%
3594413 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 57.0 5.57e-01 90.7% 93.8%
3714873 4.1.1.4 ↗ beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L27e 0.67 57.0 4.51e-01 92.0% 53.3%
3842361 1.1.5.76 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT 0.67 55.0 5.15e-01 92.0% 90.5%
3597659 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 4.73e-01 94.7% 59.7%
3793700 219.1.1.110 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C1, Peptidase_C1_2 0.66 54.0 4.28e-01 90.7% 61.9%
3574352 4.1.1.332 ↗ beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.66 54.0 4.79e-01 90.7% 90.0%
3546727 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 60.0 5.25e-01 100.0% 73.1%
3961706 4.1.1.161 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4178 0.66 50.0 5.29e-01 89.3% 92.3%
4077893 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 50.0 2.96e-01 88.0% 11.5%
4030011 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.65 56.0 5.34e-01 97.3% 84.4%
3400775 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 51.0 4.33e-01 90.7% 96.8%
3283097 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.61 51.0 4.51e-01 92.0% 65.5%
5067458 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 41.0 4.62e-01 92.0% 98.2%
3373105 4.1.1.309 ↗ beta barrels › SH3 › SH3 › SH3 › MRP-S34 0.58 47.0 4.69e-01 93.3% 88.7%
5054019 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 46.0 4.80e-01 93.3% 95.7%
4030120 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 46.0 2.78e-01 88.0% 13.8%
3700517 5.1.2.33 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.56 47.0 3.15e-01 97.3% 40.6%
3577548 331.12.1.0 ↗ a+b two layers › TBP-like › YugN-like › YugN-like 0.55 40.0 3.56e-01 93.3% 52.2%
4945464 3445.1.1.1 ↗ beta barrels › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › DUF1684 0.54 46.0 3.60e-01 98.7% 62.9%
3671367 5.1.4.11 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Clathrin_propel 0.51 42.0 2.79e-01 94.7% 47.6%
3789606 4014.1.1.0 ↗ a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase 0.51 34.0 2.67e-01 94.7% 30.6%
5052022 1.1.5.10 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct 0.50 41.0 3.29e-01 92.0% 85.4%