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MG592584.1__AUR95914.1__NVP1214O_65__00065
Bact-VirMG592584.1__AUR95914.1__NVP1214O_65__00065
Identity
- Accession:
- MG592584 ↗
- Kingdom:
- phage
Quality
77.1
mean pLDDT
Taxonomy
TaxID: 1881264
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-88
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 40.8 | 3.70e-10 | 96.5% | 96.9% |
| PF13455.13 | MUG113 | 35.3 | 1.90e-08 | 80.5% | 98.6% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6jzaA00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.76 | 36.0 | 3.77e-01 | 90.8% | 48.1% |
| 1ln0A00 | 3.40.1440.10 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.75 | 56.0 | 5.51e-01 | 78.2% | 96.7% |
| 2n17A00 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 37.0 | 4.40e-01 | 85.1% | 80.4% |
| 2k2dA00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.63 | 31.0 | 3.98e-01 | 85.1% | 85.1% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 35.0 | 3.56e-01 | 97.7% | 54.7% |
| 3rjaA02 | 3.40.462.20 | Alpha Beta › 3-Layer(aba) Sandwich › Vanillyl-alcohol Oxidase; Chain A, domain 3 › | 0.62 | 45.0 | 3.35e-01 | 77.0% | 65.1% |
| 4dohE02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 36.0 | 3.38e-01 | 93.1% | 47.2% |
| 1k82A02 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 43.0 | 3.91e-01 | 95.4% | 54.5% |
| 2wcyA01 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.59 | 30.0 | 3.25e-01 | 87.4% | 53.3% |
| 2qsdB02 | 3.50.100.10 | Alpha Beta › 3-Layer(bba) Sandwich › protein il1583 fold › protein il1583 domain | 0.57 | 38.0 | 4.01e-01 | 70.1% | 76.9% |
| 3b8mC02 | 1.10.287.210 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 31.0 | 2.91e-01 | 100.0% | 47.1% |
| 7uvpA02 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.54 | 37.0 | 4.08e-01 | 86.2% | 89.9% |
| 2gbsA00 | 3.10.590.10 | Alpha Beta › Roll › ph1033 like fold › ph1033 like domains | 0.53 | 44.0 | 3.79e-01 | 94.3% | 93.1% |
| 6z46V01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 47.0 | 3.70e-01 | 98.9% | 87.9% |
| 5zneA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 41.0 | 4.49e-01 | 96.6% | 100.0% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.51 | 35.0 | 3.43e-01 | 98.9% | 65.3% |
| 5ljmA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.50 | 41.0 | 3.21e-01 | 92.0% | 85.7% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3735748 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.91 | 86.0 | 6.67e-01 | 100.0% | 61.2% |
| 3689357 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.90 | 85.0 | 6.69e-01 | 100.0% | 65.5% |
| 3946107 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.89 | 82.0 | 7.92e-01 | 96.6% | 97.9% |
| 3989300 | 821.1.1.3 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › T5orf172 | 0.84 | 77.0 | 7.10e-01 | 100.0% | 95.5% |
| 3496147 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.82 | 60.0 | 5.72e-01 | 75.9% | 99.0% |
| 3197583 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.82 | 76.0 | 5.74e-01 | 100.0% | 79.8% |
| 3698242 | 821.1.1.10 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease › MUG113 | 0.81 | 75.0 | 6.61e-01 | 100.0% | 78.9% |
| 5027350 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.69 | 45.0 | 3.79e-01 | 100.0% | 41.3% |
| 3400462 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.69 | 40.0 | 4.73e-01 | 77.0% | 86.2% |
| 4106367 | 379.1.1.1 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 | 0.69 | 37.0 | 4.51e-01 | 87.4% | 84.9% |
| 3738005 | 3868.1.1.1 ↗ | a+b three layers › Mitochondrial homologous recombination protein 1 › Mitochondrial homologous recombination protein 1 › Mitochondrial homologous recombination protein 1 › Mhr1 | 0.68 | 61.0 | 5.02e-01 | 100.0% | 78.1% |
| 4963 | 4012.1.1.1 ↗ | a+b two layers › SSHS domain › SSHS domain in type II DNA topoisomerase › SSHS domain in type II DNA topoisomerase › TOPRIM_C | 0.64 | 34.0 | 4.49e-01 | 92.0% | 100.0% |
| 3415578 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.64 | 34.0 | 4.21e-01 | 89.7% | 88.0% |
| 3489385 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 40.0 | 3.63e-01 | 95.4% | 47.2% |
| 3293767 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.58 | 40.0 | 4.26e-01 | 87.4% | 82.7% |
| 3390562 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.58 | 37.0 | 3.98e-01 | 90.8% | 78.6% |
| 3247097 | 216.1.1.17 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C | 0.58 | 41.0 | 3.82e-01 | 100.0% | 57.4% |
| 3516954 | 3105.1.1.0 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related | 0.57 | 44.0 | 3.58e-01 | 100.0% | 44.2% |
| 4517262 | 4943.1.1.1 ↗ | a+b two layers › YcgL/NE1680-like › YcgL/NE1680-like › YcgL/NE1680-like › YcgL | 0.56 | 42.0 | 4.25e-01 | 80.5% | 88.2% |
| 4105300 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.55 | 39.0 | 3.82e-01 | 73.6% | 84.2% |
| 3416455 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.55 | 36.0 | 4.23e-01 | 85.1% | 98.3% |
| 4199253 | 1.1.1.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › tRNA-synt_1_2 | 0.54 | 40.0 | 3.08e-01 | 78.2% | 71.2% |
| 3807180 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.54 | 43.0 | 4.63e-01 | 100.0% | 97.3% |
| 3935405 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 39.0 | 3.93e-01 | 97.7% | 75.6% |
| 3575366 | 221.1.1.76 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA_2 | 0.52 | 39.0 | 3.80e-01 | 98.9% | 72.6% |
| 3405569 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.51 | 38.0 | 3.56e-01 | 100.0% | 63.6% |
| 4979542 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.51 | 36.0 | 2.80e-01 | 74.7% | 52.0% |
| 4478722 | 304.8.1.5 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL | 0.50 | 36.0 | 3.45e-01 | 77.0% | 84.8% |
D2
high
residues 95-176