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MG592585.1__AUR95936.1__NVP1215A_018__00018
Bact-VirMG592585.1__AUR95936.1__NVP1215A_018__00018
Identity
- Accession:
- MG592585 ↗
- Kingdom:
- phage
Quality
84.2
mean pLDDT
Taxonomy
TaxID: 1881438
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-110
Domain cluster:
rep: NC_016567.1__YP_004957547.1__VPEG_00054__00054__D22-97
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hntA04 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.71 | 43.0 | 3.98e-01 | 80.8% | 47.5% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.68 | 39.0 | 4.16e-01 | 87.2% | 65.7% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 47.0 | 5.19e-01 | 100.0% | 91.9% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.65 | 41.0 | 3.95e-01 | 82.1% | 54.9% |
| 3bg3A01 | 3.10.600.10 | Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain | 0.64 | 40.0 | 3.74e-01 | 80.8% | 48.5% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 48.0 | 4.27e-01 | 100.0% | 57.4% |
| 1zs7A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.63 | 52.0 | 4.73e-01 | 89.7% | 99.0% |
| 3ddvB01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.61 | 44.0 | 3.71e-01 | 76.9% | 51.1% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 49.0 | 4.38e-01 | 85.9% | 86.9% |
| 2nugB02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 40.0 | 4.22e-01 | 80.8% | 76.1% |
| 2p19A01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.59 | 44.0 | 3.74e-01 | 80.8% | 51.5% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.58 | 40.0 | 3.73e-01 | 100.0% | 55.8% |
| 2fa1A00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.57 | 48.0 | 3.84e-01 | 93.6% | 93.1% |
| 1di2A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 40.0 | 4.21e-01 | 80.8% | 82.6% |
| 1xteA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.57 | 44.0 | 3.92e-01 | 84.6% | 80.2% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 49.0 | 4.25e-01 | 100.0% | 100.0% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.56 | 39.0 | 3.56e-01 | 100.0% | 53.2% |
| 4jbmB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 45.0 | 4.20e-01 | 88.5% | 84.4% |
| 2oggA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.55 | 40.0 | 3.41e-01 | 76.9% | 55.2% |
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.55 | 45.0 | 3.92e-01 | 89.7% | 75.2% |
| 1rerA01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.55 | 49.0 | 4.20e-01 | 100.0% | 92.9% |
| 2hrvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 41.0 | 3.92e-01 | 82.1% | 85.3% |
| 1vloA04 | 2.40.30.110 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains | 0.54 | 38.0 | 3.70e-01 | 89.7% | 63.7% |
| 2cqaA01 | 2.40.50.360 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RuvBL1 DNA/RNA binding domain | 0.54 | 43.0 | 4.40e-01 | 87.2% | 97.3% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 37.0 | 3.99e-01 | 93.6% | 90.3% |
| 2rajA02 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 41.0 | 3.56e-01 | 84.6% | 68.3% |
| 4fvdA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 39.0 | 3.76e-01 | 80.8% | 85.1% |
| 1eurA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 46.0 | 3.02e-01 | 100.0% | 77.6% |
| 2ikkA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.52 | 42.0 | 3.48e-01 | 92.3% | 96.6% |
| 6n44A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 46.0 | 3.81e-01 | 100.0% | 88.5% |
| 1v7pB00 | 3.10.100.10 | Alpha Beta › Roll › Mannose-Binding Protein A; Chain A › Mannose-Binding Protein A, subunit A | 0.51 | 46.0 | 3.91e-01 | 100.0% | 74.0% |
| 2laeA00 | 3.30.310.170 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC | 0.51 | 36.0 | 3.22e-01 | 88.5% | 50.0% |
| 3q5zA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 41.0 | 3.59e-01 | 91.0% | 84.3% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.50 | 42.0 | 2.99e-01 | 98.7% | 73.7% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973193 | 802.1.1.1 ↗ | a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 › BFN_dom | 0.65 | 45.0 | 4.39e-01 | 91.0% | 65.9% |
| 5028251 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.64 | 54.0 | 4.76e-01 | 91.0% | 87.3% |
| 145843 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.63 | 48.0 | 4.27e-01 | 100.0% | 57.4% |
| 3761598 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.63 | 52.0 | 3.48e-01 | 91.0% | 40.6% |
| 3987313 | 814.1.1.3 ↗ | a+b two layers › Chorismate lyase › Chorismate lyase › Chorismate lyase › UTRA | 0.62 | 49.0 | 3.95e-01 | 87.2% | 51.9% |
| 3203392 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.62 | 50.0 | 3.47e-01 | 85.9% | 40.4% |
| 3494858 | 109.4.1.816 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N | 0.62 | 55.0 | 3.08e-01 | 100.0% | 8.5% |
| 3648115 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.62 | 46.0 | 3.83e-01 | 79.5% | 75.6% |
| 3380294 | 9.1.1.21 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Cyclin_D1_bind | 0.62 | 54.0 | 4.45e-01 | 100.0% | 96.6% |
| 3385864 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.62 | 38.0 | 4.14e-01 | 87.2% | 78.3% |
| 3390533 | 4.8.1.19 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › WAC_Acf1_DNA_bd | 0.60 | 49.0 | 3.86e-01 | 100.0% | 43.1% |
| 3612351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 48.0 | 4.92e-01 | 98.7% | 92.0% |
| 3599565 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.57 | 42.0 | 4.22e-01 | 78.2% | 78.8% |
| 3703449 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.56 | 48.0 | 4.95e-01 | 100.0% | 96.0% |
| 3823244 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 41.0 | 3.43e-01 | 76.9% | 54.1% |
| 3484453 | 5.1.4.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP | 0.56 | 47.0 | 2.95e-01 | 97.4% | 43.5% |
| 4644245 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.56 | 45.0 | 3.16e-01 | 87.2% | 37.3% |
| 4087511 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.56 | 44.0 | 3.98e-01 | 87.2% | 93.6% |
| 3175156 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.54 | 43.0 | 4.57e-01 | 98.7% | 95.7% |
| 3865654 | 220.1.1.52 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SNX17_FERM_C | 0.54 | 48.0 | 4.22e-01 | 100.0% | 76.7% |
| 3619214 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 36.0 | 4.07e-01 | 79.5% | 96.4% |
| 3855429 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 46.0 | 2.81e-01 | 98.7% | 13.1% |
| 5076824 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.54 | 43.0 | 2.85e-01 | 88.5% | 30.7% |
| 3689992 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 45.0 | 3.12e-01 | 97.4% | 38.3% |
| 3184103 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.53 | 47.0 | 3.29e-01 | 100.0% | 98.8% |
| 5054112 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 38.0 | 4.08e-01 | 82.1% | 92.3% |
| 3499266 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 41.0 | 3.54e-01 | 83.3% | 91.1% |
| 3489170 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.53 | 47.0 | 4.53e-01 | 100.0% | 88.9% |
| 4125419 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.53 | 40.0 | 3.44e-01 | 91.0% | 49.2% |
| 3184113 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.53 | 41.0 | 3.87e-01 | 87.2% | 84.0% |
| 3602312 | 325.1.6.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase | 0.52 | 41.0 | 3.24e-01 | 87.2% | 99.4% |
| 3539840 | 2.1.1.188 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CSDE1 | 0.52 | 42.0 | 4.15e-01 | 89.7% | 100.0% |
| 4944943 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.52 | 42.0 | 4.01e-01 | 92.3% | 98.9% |
| 3476615 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 45.0 | 4.48e-01 | 100.0% | 92.5% |
| 3250190 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.51 | 43.0 | 2.70e-01 | 93.6% | 40.2% |
| 3193145 | 2003.1.2.29 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 | 0.51 | 42.0 | 2.69e-01 | 92.3% | 48.0% |
| 3701675 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.51 | 35.0 | 3.76e-01 | 75.6% | 83.8% |
| 3851361 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.51 | 44.0 | 3.99e-01 | 100.0% | 71.4% |
| 3906455 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 29.0 | 3.26e-01 | 80.8% | 75.0% |