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MG592585.1__AUR95998.1__NVP1215A_080__00080
Bact-VirMG592585.1__AUR95998.1__NVP1215A_080__00080
Identity
- Accession:
- MG592585 ↗
- Kingdom:
- phage
Quality
84.4
mean pLDDT
Taxonomy
TaxID: 1881438
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-107_297-327
Domain cluster:
rep: MK088078.1__AYP28997.1__AS1_17__00017__D5-108
D2
high
residues 110-181
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.76 | 69.0 | 5.60e-01 | 100.0% | 63.4% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.75 | 65.0 | 4.52e-01 | 100.0% | 30.1% |
| 1vq8B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.75 | 67.0 | 5.42e-01 | 100.0% | 78.8% |
| 4he6A00 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.74 | 67.0 | 6.28e-01 | 100.0% | 88.8% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.73 | 65.0 | 6.41e-01 | 100.0% | 93.3% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.70 | 62.0 | 5.63e-01 | 100.0% | 84.7% |
| 1nrkA03 | 2.40.30.160 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.68 | 55.0 | 4.65e-01 | 88.9% | 78.7% |
| 2xzlA02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 58.0 | 5.69e-01 | 100.0% | 96.2% |
| 2j5uA02 | 2.40.10.340 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 1 | 0.66 | 58.0 | 5.56e-01 | 100.0% | 89.3% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.66 | 57.0 | 5.24e-01 | 100.0% | 94.8% |
| 1qfjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.65 | 57.0 | 5.31e-01 | 100.0% | 89.0% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.65 | 58.0 | 4.67e-01 | 100.0% | 56.5% |
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.63 | 55.0 | 5.29e-01 | 100.0% | 91.8% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 43.0 | 3.33e-01 | 100.0% | 34.6% |
| 4ecnA02 | 2.60.40.3540 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 | 0.59 | 46.0 | 3.99e-01 | 88.9% | 60.7% |
| 4fmrB01 | 2.70.50.70 | Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › | 0.56 | 47.0 | 3.86e-01 | 100.0% | 57.0% |
| 2ed8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 46.0 | 4.36e-01 | 98.6% | 75.6% |
| 2m2dA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 47.0 | 4.10e-01 | 98.6% | 78.0% |
| 3pv7A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 47.0 | 4.32e-01 | 94.4% | 95.7% |
| 1iarB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 48.0 | 4.44e-01 | 100.0% | 83.3% |
| 7qu8A01 | 2.60.220.50 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › | 0.55 | 41.0 | 2.97e-01 | 80.6% | 65.4% |
| 5k3xA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 47.0 | 4.14e-01 | 100.0% | 68.1% |
| 1p7hL02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 46.0 | 4.11e-01 | 100.0% | 78.5% |
| 2mizA00 | 2.60.40.2900 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 46.0 | 3.69e-01 | 100.0% | 73.7% |
| 5eb9A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 3.92e-01 | 97.2% | 83.9% |
| 5g47A01 | 2.60.40.3770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 44.0 | 4.28e-01 | 100.0% | 83.1% |
| 3bc9A01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 4.27e-01 | 98.6% | 79.6% |
| 1nezH00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 44.0 | 3.83e-01 | 97.2% | 81.7% |
| 3wdhA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 4.07e-01 | 98.6% | 75.0% |
| 7mjrA04 | 2.60.40.1790 | Mainly Beta › Sandwich › Immunoglobulin-like › Fungal immunomodulatory protein Fve | 0.53 | 42.0 | 3.96e-01 | 100.0% | 72.8% |
| 2wanA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 3.78e-01 | 95.8% | 63.7% |
| 3h7lA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.08e-01 | 100.0% | 87.1% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 4.05e-01 | 100.0% | 74.4% |
| 2vr5B01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 43.0 | 3.51e-01 | 94.4% | 46.3% |
| 2je8B05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 45.0 | 4.17e-01 | 100.0% | 76.4% |
| 4llfD02 | 2.60.40.4030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 46.0 | 3.91e-01 | 100.0% | 85.8% |
| 5j7mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 40.0 | 3.34e-01 | 81.9% | 76.2% |
| 3es1A02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 47.0 | 3.85e-01 | 100.0% | 56.3% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 42.0 | 3.84e-01 | 100.0% | 88.3% |
| 3bcwA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 45.0 | 3.95e-01 | 100.0% | 66.3% |
| 2bnmA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 47.0 | 3.94e-01 | 100.0% | 65.8% |
| 2vpvA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 47.0 | 4.28e-01 | 100.0% | 77.7% |
| 1imhC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 3.91e-01 | 100.0% | 78.3% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 43.0 | 4.16e-01 | 100.0% | 98.8% |
| 5axgA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 44.0 | 3.76e-01 | 100.0% | 95.2% |
| 2v72A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.61e-01 | 100.0% | 96.4% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 44.0 | 4.16e-01 | 100.0% | 81.1% |
| 2n1kA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.66e-01 | 100.0% | 61.3% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 3.78e-01 | 100.0% | 71.7% |
| 5z0uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 43.0 | 3.70e-01 | 100.0% | 71.0% |
| 1e5bA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 43.0 | 4.14e-01 | 100.0% | 93.1% |
| 2xtsA02 | 2.60.40.650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 3.60e-01 | 100.0% | 61.5% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4203993 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.78 | 70.0 | 6.38e-01 | 100.0% | 84.2% |
| 3967745 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.77 | 67.0 | 6.60e-01 | 100.0% | 92.0% |
| 4010630 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.75 | 65.0 | 3.98e-01 | 100.0% | 16.0% |
| 3978877 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 68.0 | 6.29e-01 | 100.0% | 83.3% |
| 153873 | 1.1.7.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_U32_C | 0.74 | 67.0 | 6.28e-01 | 100.0% | 88.8% |
| 4319764 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 64.0 | 5.56e-01 | 100.0% | 62.7% |
| 4636885 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.74 | 65.0 | 6.48e-01 | 100.0% | 93.3% |
| 5032036 | 1.1.7.36 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Peptidase_U32_C | 0.73 | 66.0 | 6.38e-01 | 100.0% | 95.0% |
| 4518787 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 63.0 | 6.28e-01 | 100.0% | 92.0% |
| 2556060 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.73 | 64.0 | 6.23e-01 | 100.0% | 89.7% |
| 3388311 | 1.1.7.100 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PGBA_N | 0.72 | 65.0 | 6.16e-01 | 100.0% | 96.5% |
| 4943639 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.72 | 63.0 | 6.02e-01 | 100.0% | 85.9% |
| 4952364 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.70 | 63.0 | 6.00e-01 | 100.0% | 96.5% |
| 5017568 | 1.1.7.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Gar1 | 0.70 | 61.0 | 5.98e-01 | 100.0% | 92.5% |
| 3945528 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 59.0 | 5.74e-01 | 100.0% | 88.7% |
| 4963598 | 1.1.7.150 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26503 | 0.67 | 52.0 | 5.18e-01 | 86.1% | 90.7% |
| 3822637 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.66 | 57.0 | 5.25e-01 | 100.0% | 77.9% |
| 4015971 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 55.0 | 5.26e-01 | 98.6% | 95.3% |
| 3277382 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.63 | 54.0 | 5.07e-01 | 100.0% | 81.1% |
| 3255719 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.60 | 51.0 | 4.79e-01 | 100.0% | 80.0% |
| 3265575 | 11.1.1.698 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TgrO1 | 0.59 | 49.0 | 4.70e-01 | 100.0% | 83.5% |
| 3263988 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 48.0 | 4.68e-01 | 100.0% | 83.5% |
| 3251295 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.58 | 49.0 | 4.64e-01 | 100.0% | 77.8% |
| 3251635 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 50.0 | 4.43e-01 | 100.0% | 76.4% |
| 3776866 | 12.5.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › FAM171A1-2-B_N | 0.58 | 47.0 | 4.20e-01 | 94.4% | 80.0% |
| 3916538 | 12.5.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › FAM171A1-2-B_N | 0.58 | 49.0 | 3.91e-01 | 100.0% | 49.7% |
| 3259442 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.58 | 49.0 | 4.66e-01 | 100.0% | 82.2% |
| 3260252 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.58 | 50.0 | 4.62e-01 | 100.0% | 77.9% |
| 3774761 | 11.1.1.275 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL3Ra_N | 0.58 | 46.0 | 4.36e-01 | 100.0% | 72.9% |
| 3243014 | 394.1.1.0 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins | 0.58 | 37.0 | 3.84e-01 | 83.3% | 73.0% |
| 3756559 | 11.1.4.74 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › FAM171A1-2-B_N | 0.57 | 48.0 | 3.43e-01 | 100.0% | 32.9% |
| 3275146 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.57 | 47.0 | 4.50e-01 | 100.0% | 77.8% |
| 3273204 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.57 | 48.0 | 4.50e-01 | 100.0% | 75.8% |
| 3251949 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 47.0 | 4.53e-01 | 97.2% | 80.0% |
| 3887475 | 12.5.1.15 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › FAM171A1-2-B_N | 0.56 | 47.0 | 3.70e-01 | 100.0% | 48.8% |
| 3389168 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.56 | 48.0 | 3.54e-01 | 100.0% | 34.6% |
| 3208411 | 708.1.2.10 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › HECT_2 | 0.56 | 40.0 | 2.89e-01 | 77.8% | 40.6% |
| 4938061 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 48.0 | 4.21e-01 | 100.0% | 85.5% |
| 3905598 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 46.0 | 3.66e-01 | 100.0% | 54.8% |
| 3857972 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.53 | 44.0 | 3.91e-01 | 91.7% | 87.6% |
| 3251680 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.53 | 46.0 | 3.92e-01 | 100.0% | 76.0% |
| 3290548 | 3445.1.1.1 ↗ | beta barrels › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › Uncharacterized protein from gene locus rrnAC0354 › DUF1684 | 0.53 | 36.0 | 2.87e-01 | 70.8% | 64.2% |
| 5070517 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 41.0 | 4.14e-01 | 100.0% | 86.7% |
| 3247872 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.53 | 45.0 | 3.87e-01 | 100.0% | 76.0% |
| 2773775 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 45.0 | 3.67e-01 | 98.6% | 55.9% |
| 5031406 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 4.31e-01 | 100.0% | 93.3% |
| 3262493 | 11.1.1.843 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 | 0.52 | 47.0 | 3.90e-01 | 100.0% | 74.4% |
| 3891965 | 10.3.1.1 ↗ | beta sandwiches › jelly-roll › TNF-like › TNF-like › TNF | 0.52 | 44.0 | 3.57e-01 | 100.0% | 94.8% |
| 4127812 | 11.1.1.18 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD | 0.52 | 43.0 | 3.81e-01 | 100.0% | 74.2% |
| 4996561 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 44.0 | 4.17e-01 | 93.1% | 83.5% |
| 5055396 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 44.0 | 3.96e-01 | 100.0% | 79.0% |
| 4067132 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 3.82e-01 | 100.0% | 68.2% |
| 3928043 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 42.0 | 4.02e-01 | 97.2% | 83.3% |
| 3836184 | 11.10.1.5 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 | 0.51 | 42.0 | 3.45e-01 | 100.0% | 78.7% |
| 4150515 | 11.2.1.44 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2_SHIP1-2_2nd | 0.51 | 40.0 | 3.34e-01 | 93.1% | 51.7% |
| 5031538 | 11.1.1.212 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_3_5 | 0.51 | 43.0 | 4.03e-01 | 100.0% | 77.9% |
| 2144351 | 109.4.1.1136 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HAT_PRP39_N | 0.50 | 45.0 | 3.55e-01 | 100.0% | 47.7% |
| 2414505 | 10.12.1.26 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Pirin_C | 0.50 | 45.0 | 3.53e-01 | 100.0% | 47.1% |
| 3887025 | 11.1.1.117 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › EpoR_lig-bind | 0.50 | 43.0 | 3.94e-01 | 100.0% | 71.0% |
| 3385725 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 44.0 | 3.81e-01 | 100.0% | 65.2% |
| 5031829 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 41.0 | 3.67e-01 | 100.0% | 62.5% |
D3
high
residues 198-295
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r7dA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 28.0 | 3.49e-01 | 78.6% | 68.3% |
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.61 | 31.0 | 3.58e-01 | 79.6% | 65.7% |
| 1uebA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 32.0 | 3.74e-01 | 79.6% | 76.2% |
| 1ybyA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 31.0 | 3.66e-01 | 80.6% | 76.6% |
| 3a5zD02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 31.0 | 3.65e-01 | 80.6% | 76.6% |
| 1u0lA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 30.0 | 3.52e-01 | 79.6% | 75.0% |
| 1t9hA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 31.0 | 3.43e-01 | 78.6% | 69.9% |
| 2eifA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 28.0 | 3.38e-01 | 79.6% | 76.3% |
| 4q66D01 | 6.20.120.50 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 29.0 | 3.25e-01 | 72.4% | 64.4% |
| 1rerA01 | 2.60.98.10 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 | 0.55 | 49.0 | 4.50e-01 | 100.0% | 96.0% |
| 4fw1A02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.54 | 27.0 | 3.49e-01 | 92.9% | 87.0% |
| 2ja9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 30.0 | 3.20e-01 | 80.6% | 62.7% |
| 2id0A04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 36.0 | 3.78e-01 | 80.6% | 78.2% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.53 | 44.0 | 4.33e-01 | 100.0% | 87.4% |
| 4rzkA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 35.0 | 3.67e-01 | 99.0% | 77.0% |
| 6g1nD01 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.52 | 37.0 | 3.99e-01 | 74.5% | 98.8% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2409295 | 3943.1.1.3 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › flgK_1st_1 | 0.72 | 61.0 | 6.24e-01 | 100.0% | 94.6% |
| 4632109 | 3943.1.1.5 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N | 0.68 | 61.0 | 5.85e-01 | 100.0% | 100.0% |
| 4006143 | 3943.1.1.5 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N | 0.67 | 60.0 | 6.17e-01 | 99.0% | 100.0% |
| 3946575 | 3943.1.1.5 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N | 0.66 | 59.0 | 6.00e-01 | 96.9% | 100.0% |
| 4230933 | 3943.1.1.5 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › WZC_N | 0.66 | 58.0 | 5.93e-01 | 99.0% | 100.0% |
| 4972486 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 31.0 | 3.93e-01 | 78.6% | 80.0% |
| 4997768 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 31.0 | 3.87e-01 | 79.6% | 80.0% |
| 4947996 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 30.0 | 3.79e-01 | 77.6% | 78.2% |
| 4184764 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.62 | 33.0 | 3.89e-01 | 78.6% | 75.4% |
| 4168836 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.62 | 34.0 | 3.92e-01 | 80.6% | 74.3% |
| 4975151 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 30.0 | 3.78e-01 | 77.6% | 80.0% |
| 4050524 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.62 | 33.0 | 3.81e-01 | 78.6% | 73.8% |
| 5003400 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 34.0 | 3.39e-01 | 82.7% | 49.5% |
| 4259370 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 30.0 | 3.77e-01 | 79.6% | 80.0% |
| 5025080 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 28.0 | 3.68e-01 | 80.6% | 82.0% |
| 4119533 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.61 | 30.0 | 3.66e-01 | 78.6% | 75.0% |
| 4062751 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.60 | 31.0 | 3.80e-01 | 79.6% | 78.3% |
| 4946166 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 31.0 | 3.80e-01 | 80.6% | 80.0% |
| 4434149 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.60 | 32.0 | 3.76e-01 | 79.6% | 75.4% |
| 4032291 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.60 | 31.0 | 3.68e-01 | 78.6% | 73.8% |
| 4250239 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.60 | 32.0 | 3.73e-01 | 79.6% | 75.4% |
| 4453243 | 2.1.1.219 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_cyt-4 | 0.60 | 34.0 | 3.64e-01 | 76.5% | 63.5% |
| 4678731 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.59 | 32.0 | 3.71e-01 | 79.6% | 75.4% |
| 4252940 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.59 | 31.0 | 3.63e-01 | 78.6% | 73.8% |
| 3948516 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.59 | 32.0 | 3.73e-01 | 79.6% | 76.9% |
| 4932460 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.59 | 31.0 | 3.75e-01 | 80.6% | 79.4% |
| 5057503 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 31.0 | 3.72e-01 | 78.6% | 80.0% |
| 3838464 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 31.0 | 3.67e-01 | 79.6% | 75.4% |
| 4161636 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 30.0 | 3.57e-01 | 78.6% | 72.3% |
| 4425795 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 31.0 | 3.60e-01 | 78.6% | 73.8% |
| 4051852 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 31.0 | 3.69e-01 | 80.6% | 76.9% |
| 4066623 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.58 | 30.0 | 3.65e-01 | 78.6% | 80.0% |
| 4167626 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.57 | 31.0 | 3.58e-01 | 80.6% | 75.4% |
| 3738728 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.57 | 38.0 | 3.87e-01 | 79.6% | 70.5% |
| 4039724 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.57 | 30.0 | 3.52e-01 | 78.6% | 73.8% |
| 3719143 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.57 | 41.0 | 3.70e-01 | 92.9% | 54.8% |
| 4027740 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 32.0 | 3.27e-01 | 79.6% | 55.0% |
| 3899842 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 32.0 | 3.44e-01 | 79.6% | 63.5% |
| 4008023 | 2.1.1.332 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30333 | 0.56 | 39.0 | 4.01e-01 | 87.8% | 76.8% |
| 3688923 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.55 | 36.0 | 4.07e-01 | 80.6% | 88.0% |
| 4942017 | 5090.1.1.0 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains | 0.55 | 49.0 | 4.70e-01 | 100.0% | 95.7% |
| 3389706 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 37.0 | 3.99e-01 | 79.6% | 81.2% |
| 4945673 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 30.0 | 3.51e-01 | 80.6% | 79.7% |
| 4045981 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 34.0 | 3.56e-01 | 79.6% | 68.9% |
| 3592754 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 40.0 | 3.78e-01 | 79.6% | 88.2% |
| 3740511 | 2.1.1.89 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Dis3l2_C_term | 0.53 | 35.0 | 3.70e-01 | 78.6% | 74.4% |
| 4000532 | 2.1.1.81 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 | 0.53 | 33.0 | 3.55e-01 | 78.6% | 72.9% |
| 4399115 | 2.1.1.13 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-5a | 0.52 | 34.0 | 3.94e-01 | 79.6% | 98.5% |
| 3431731 | 2.1.1.238 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31157 | 0.51 | 30.0 | 3.29e-01 | 78.6% | 68.8% |
| 1877308 | 2.1.1.81 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rrp44_S1 | 0.51 | 36.0 | 3.85e-01 | 78.6% | 85.5% |
| 3598260 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.51 | 36.0 | 3.38e-01 | 93.9% | 58.4% |
| 3644862 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 39.0 | 2.65e-01 | 82.7% | 38.1% |
| 4071322 | 10.32.1.18 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Endotoxin_C | 0.50 | 36.0 | 3.12e-01 | 75.5% | 95.0% |