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MG592587.1__AUR96138.1__NVP1216O_10__00010
Bact-VirMG592587.1__AUR96138.1__NVP1216O_10__00010
Identity
- Accession:
- MG592587 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Taxonomy
TaxID: 1881411
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-76
Domain cluster:
rep: NC_019518.1__YP_007006438.1__F397_gp49__00049__D16-72
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02954.26 best | HTH_8 | 23.0 | 7.20e-05 | 52.6% | 61.9% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d1lA00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.87 | 72.0 | 7.05e-01 | 100.0% | 83.6% |
| 2auwB02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.71 | 55.0 | 5.17e-01 | 84.2% | 97.1% |
| 2cw1A00 | 3.30.240.10 | Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor | 0.71 | 58.0 | 5.59e-01 | 100.0% | 80.0% |
| 2ppxA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 54.0 | 5.35e-01 | 89.5% | 91.8% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.67 | 48.0 | 4.34e-01 | 75.4% | 68.8% |
| 2hinA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.65 | 56.0 | 5.36e-01 | 94.7% | 81.8% |
| 3oc2A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.61 | 52.0 | 3.72e-01 | 96.5% | 33.5% |
| 2o38A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 52.0 | 5.00e-01 | 94.7% | 83.1% |
| 4pu7A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 49.0 | 4.55e-01 | 91.2% | 71.8% |
| 2d5vA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.59 | 47.0 | 4.33e-01 | 93.0% | 86.1% |
| 3op9A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 45.0 | 4.32e-01 | 87.7% | 77.9% |
| 2r1jL00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.57 | 47.0 | 4.52e-01 | 93.0% | 80.3% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 46.0 | 3.99e-01 | 100.0% | 85.7% |
| 5cb1A02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.55 | 39.0 | 3.79e-01 | 73.7% | 84.1% |
| 2k50A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 44.0 | 3.69e-01 | 100.0% | 77.9% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2389361 | 101.1.4.11 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Cro | 0.87 | 73.0 | 7.12e-01 | 100.0% | 83.9% |
| 159227 | 101.1.4.11 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Cro | 0.71 | 58.0 | 5.59e-01 | 100.0% | 80.0% |
| 3166016 | 101.1.4.17 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 | 0.69 | 51.0 | 5.05e-01 | 78.9% | 96.7% |
| 3588243 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.63 | 52.0 | 5.11e-01 | 93.0% | 85.0% |
| 2755152 | 308.2.1.0 ↗ | a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain | 0.61 | 52.0 | 4.85e-01 | 96.5% | 81.9% |
| 4979523 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.60 | 50.0 | 4.31e-01 | 94.7% | 58.9% |
| 4979598 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.59 | 49.0 | 4.65e-01 | 93.0% | 75.7% |
| 3965549 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.59 | 49.0 | 4.52e-01 | 93.0% | 70.7% |
| 3971161 | 308.2.1.0 ↗ | a+b two layers › ClpS-like › Penicillin binding protein ClpS-like domain › Penicillin binding protein ClpS-like domain | 0.59 | 48.0 | 4.53e-01 | 93.0% | 81.4% |
| 4147763 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.58 | 47.0 | 4.44e-01 | 93.0% | 74.3% |
| 3398568 | 103.1.1.35 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › DUF4778 | 0.57 | 41.0 | 3.42e-01 | 75.4% | 86.6% |
| 3282671 | 101.1.4.3 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 | 0.57 | 47.0 | 4.37e-01 | 93.0% | 72.6% |
| 3957963 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 39.0 | 3.32e-01 | 71.9% | 80.0% |
| 5004480 | 2.1.1.364 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF2110 | 0.55 | 45.0 | 4.16e-01 | 100.0% | 88.7% |
| 4959456 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.52 | 41.0 | 3.04e-01 | 91.2% | 44.1% |
| 3604261 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 40.0 | 3.66e-01 | 93.0% | 100.0% |
| 3591069 | 101.1.9.43 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF771 | 0.52 | 42.0 | 3.96e-01 | 93.0% | 98.6% |