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MG592597.1__AUR96829.1__NVP1233A_16__00016
Bact-VirMG592597.1__AUR96829.1__NVP1233A_16__00016
Identity
- Accession:
- MG592597 ↗
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Taxonomy
TaxID: 1881229
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 17-80
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e62A01 | 6.10.140.420 | Special › Helix non-globular › Helix Hairpins › | 0.73 | 43.0 | 4.71e-01 | 73.4% | 73.1% |
| 2cqnA00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.72 | 56.0 | 5.38e-01 | 87.5% | 85.7% |
| 2hszA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.71 | 53.0 | 5.05e-01 | 79.7% | 82.7% |
| 3a1yA00 | 1.10.10.1410 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.70 | 50.0 | 5.24e-01 | 78.1% | 89.7% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.69 | 48.0 | 4.45e-01 | 71.9% | 89.9% |
| 4hehA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.69 | 53.0 | 4.86e-01 | 82.8% | 69.9% |
| 6qm7N00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.68 | 49.0 | 3.37e-01 | 76.6% | 30.3% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 50.0 | 4.38e-01 | 81.2% | 69.9% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.68 | 51.0 | 4.93e-01 | 84.4% | 98.7% |
| 1mzbA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 47.0 | 4.46e-01 | 81.2% | 82.9% |
| 2w02B06 | 1.10.340.60 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › AcsD, palm domain, helix bundle | 0.63 | 50.0 | 4.43e-01 | 85.9% | 84.8% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.61 | 44.0 | 3.92e-01 | 79.7% | 52.1% |
| 3umgA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.61 | 42.0 | 4.13e-01 | 75.0% | 66.2% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.60 | 37.0 | 3.48e-01 | 98.4% | 50.0% |
| 2vxdA00 | 1.10.10.2100 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain | 0.60 | 42.0 | 4.47e-01 | 75.0% | 96.3% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.59 | 45.0 | 3.48e-01 | 84.4% | 78.3% |
| 2yf4F00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.58 | 40.0 | 3.11e-01 | 71.9% | 87.4% |
| 1knqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 40.0 | 3.05e-01 | 79.7% | 77.8% |
| 1ak2A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 39.0 | 2.74e-01 | 78.1% | 82.3% |
| 4fd4A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.52 | 45.0 | 3.20e-01 | 100.0% | 70.3% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.52 | 45.0 | 4.11e-01 | 98.4% | 92.9% |
| 4exjA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 41.0 | 3.26e-01 | 84.4% | 71.1% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3314379 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.73 | 53.0 | 5.14e-01 | 76.6% | 80.0% |
| 4000709 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.73 | 50.0 | 4.89e-01 | 81.2% | 65.7% |
| 3615624 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.71 | 52.0 | 4.40e-01 | 78.1% | 49.5% |
| 5032110 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 53.0 | 4.44e-01 | 82.8% | 60.0% |
| 3010699 | 3276.1.1.0 ↗ | alpha arrays › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor › N-terminal domain in MogR repressor | 0.65 | 50.0 | 5.09e-01 | 85.9% | 88.5% |
| 3475067 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.65 | 47.0 | 3.04e-01 | 78.1% | 30.8% |
| 3182801 | 592.2.1.2 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like › WGG | 0.65 | 51.0 | 4.09e-01 | 87.5% | 76.2% |
| 3248311 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.63 | 46.0 | 2.98e-01 | 78.1% | 31.2% |
| 3829752 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.63 | 48.0 | 3.09e-01 | 81.2% | 30.7% |
| 4441096 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.62 | 44.0 | 4.55e-01 | 82.8% | 81.7% |
| 4007679 | 192.15.1.109 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › Caudo_TAP | 0.62 | 45.0 | 4.33e-01 | 98.4% | 66.2% |
| 3968657 | 4033.1.1.1 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA_dh_N | 0.62 | 50.0 | 4.55e-01 | 87.5% | 74.1% |
| 3219867 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 47.0 | 4.39e-01 | 90.6% | 64.7% |
| 4449691 | 101.1.6.4 ↗ | alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C | 0.62 | 44.0 | 4.53e-01 | 76.6% | 76.2% |
| 3655684 | 7111.1.1.1 ↗ | alpha bundles › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiq_cyt_C_chap | 0.62 | 53.0 | 4.15e-01 | 95.3% | 61.5% |
| 5026085 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.61 | 47.0 | 3.88e-01 | 81.2% | 92.6% |
| 3946046 | 101.1.2.52 ↗ | alpha arrays › HTH › HTH › winged helix domain › KicB | 0.60 | 39.0 | 3.80e-01 | 78.1% | 57.3% |
| 4662973 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.59 | 41.0 | 4.01e-01 | 81.2% | 68.6% |
| 3269813 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.58 | 43.0 | 2.83e-01 | 81.2% | 32.3% |
| 3959012 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.56 | 40.0 | 3.76e-01 | 79.7% | 96.5% |
| None | — | 0.54 | 40.0 | 2.75e-01 | 79.7% | 78.2% | |
| 3757366 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.52 | 40.0 | 3.67e-01 | 79.7% | 72.5% |