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MG592599.1__AUR96973.1__NVP1235O_40__00040
Bact-VirMG592599.1__AUR96973.1__NVP1235O_40__00040
Identity
- Accession:
- MG592599 ↗
- Kingdom:
- phage
Quality
50.3
mean pLDDT
Taxonomy
TaxID: 1881352
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-23_41-111_143-153
D2
medium
residues 182-230
Domain cluster:
rep: MG592599.1__AUR96971.1__NVP1235O_38__00038__D78-125
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hfnA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 54.0 | 5.15e-01 | 91.8% | 100.0% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 51.0 | 4.74e-01 | 91.8% | 92.4% |
| 1svdM00 | 3.30.190.10 | Alpha Beta › 2-Layer Sandwich › Ribulose 1,5 Bisphosphate Carboxylase/Oxygenase › Ribulose bisphosphate carboxylase, small subunit | 0.65 | 53.0 | 4.18e-01 | 93.9% | 64.8% |
| 1rniA01 | 3.30.720.160 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Bifunctional DNA primase/polymerase, N-terminal | 0.64 | 52.0 | 4.69e-01 | 93.9% | 87.1% |
| 1ohfA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.64 | 56.0 | 4.03e-01 | 100.0% | 89.4% |
| 3s6pA03 | 2.60.270.70 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › | 0.63 | 55.0 | 3.95e-01 | 100.0% | 90.1% |
| 3p0jA03 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.63 | 53.0 | 4.37e-01 | 100.0% | 68.4% |
| 5j3tA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 43.0 | 3.25e-01 | 73.5% | 62.7% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.60 | 45.0 | 3.71e-01 | 83.7% | 45.7% |
| 6dgiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.60 | 49.0 | 4.49e-01 | 95.9% | 86.8% |
| 3purA02 | 2.60.120.650 | Mainly Beta › Sandwich › Jelly Rolls › Cupin | 0.59 | 45.0 | 2.87e-01 | 91.8% | 18.7% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.59 | 46.0 | 4.08e-01 | 95.9% | 68.7% |
| 6sjqA00 | 3.10.20.650 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.58 | 50.0 | 3.88e-01 | 100.0% | 75.7% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 49.0 | 4.07e-01 | 98.0% | 81.3% |
| 6izcA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 49.0 | 3.12e-01 | 95.9% | 28.1% |
| 2xf1A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.57 | 40.0 | 3.04e-01 | 89.8% | 30.3% |
| 1oeyA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 48.0 | 4.16e-01 | 100.0% | 92.7% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.57 | 39.0 | 3.81e-01 | 71.4% | 94.5% |
| 4zohB02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.57 | 47.0 | 3.81e-01 | 100.0% | 87.2% |
| 6kbyA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 48.0 | 2.88e-01 | 95.9% | 27.9% |
| 2kw8A00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.56 | 41.0 | 3.01e-01 | 83.7% | 58.2% |
| 8os3A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 43.0 | 3.58e-01 | 87.8% | 78.3% |
| 2hhzA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 40.0 | 3.00e-01 | 81.6% | 58.7% |
| 2pn5A03 | 2.60.40.1940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 40.0 | 3.24e-01 | 81.6% | 77.1% |
| 2gnrA01 | 6.10.30.10 | Special › Helix non-globular › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › | 0.55 | 39.0 | 3.55e-01 | 77.6% | 62.3% |
| 5zspA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.55 | 39.0 | 2.99e-01 | 95.9% | 29.5% |
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 46.0 | 2.82e-01 | 98.0% | 61.5% |
| 4r7rA00 | 3.30.1490.410 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Uncharacterised protein PF16224, DUF4883 | 0.54 | 42.0 | 3.31e-01 | 91.8% | 54.9% |
| 1k42A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.54 | 44.0 | 3.17e-01 | 100.0% | 94.0% |
| 4eq3A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 41.0 | 3.31e-01 | 87.8% | 79.6% |
| 2dulA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 44.0 | 2.78e-01 | 100.0% | 36.0% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.17e-01 | 100.0% | 33.1% |
| 4n0rA03 | 2.60.40.3950 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 43.0 | 3.44e-01 | 95.9% | 84.5% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.53 | 35.0 | 3.58e-01 | 71.4% | 96.0% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.52 | 43.0 | 3.77e-01 | 100.0% | 92.9% |
| 7eehA01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.52 | 39.0 | 2.67e-01 | 93.9% | 83.1% |
| 2v72A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 42.0 | 3.21e-01 | 100.0% | 81.0% |
| 1s55A00 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 44.0 | 3.18e-01 | 100.0% | 81.4% |
| 2c00A03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.52 | 39.0 | 3.71e-01 | 93.9% | 86.8% |
| 2l72A00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.50 | 37.0 | 2.85e-01 | 91.8% | 33.9% |
| 3r7wC02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.50 | 42.0 | 3.31e-01 | 95.9% | 57.0% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.50 | 37.0 | 2.50e-01 | 87.8% | 85.1% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4935087 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.64 | 45.0 | 3.34e-01 | 75.5% | 60.0% |
| 3879537 | 221.1.1.94 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › AIP3 | 0.63 | 54.0 | 4.67e-01 | 100.0% | 97.5% |
| 3895031 | 221.1.1.94 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › AIP3 | 0.62 | 54.0 | 4.57e-01 | 100.0% | 89.4% |
| 3637819 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 50.0 | 3.97e-01 | 100.0% | 90.8% |
| 3925245 | 2.1.1.37 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind | 0.61 | 50.0 | 4.21e-01 | 89.8% | 68.8% |
| 3708434 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 47.0 | 3.57e-01 | 93.9% | 33.3% |
| 4984919 | 102.2.1.3 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › NFACT_N | 0.61 | 43.0 | 3.11e-01 | 75.5% | 51.7% |
| 5030725 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.60 | 52.0 | 3.87e-01 | 98.0% | 80.0% |
| 4332042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 46.0 | 4.28e-01 | 91.8% | 85.7% |
| 3590662 | 377.4.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › YlxR-like › YlxR-like › YlxR | 0.60 | 45.0 | 3.75e-01 | 83.7% | 46.7% |
| 4409502 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.60 | 47.0 | 3.78e-01 | 93.9% | 64.5% |
| 3239582 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.59 | 42.0 | 3.25e-01 | 87.8% | 35.2% |
| 3655450 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.59 | 44.0 | 2.59e-01 | 81.6% | 8.2% |
| 5051138 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.59 | 51.0 | 3.51e-01 | 100.0% | 86.1% |
| 4887308 | 275.1.1.0 ↗ | a+b two layers › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase › MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | 0.58 | 48.0 | 4.64e-01 | 100.0% | 89.7% |
| 4147685 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.57 | 44.0 | 3.61e-01 | 93.9% | 64.5% |
| 4970989 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.57 | 44.0 | 4.18e-01 | 95.9% | 75.4% |
| 5057274 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 41.0 | 3.55e-01 | 81.6% | 77.6% |
| 4958502 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.56 | 42.0 | 3.95e-01 | 87.8% | 72.3% |
| 5034970 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 41.0 | 3.37e-01 | 81.6% | 82.0% |
| 3472024 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.56 | 44.0 | 4.32e-01 | 100.0% | 80.0% |
| 3365600 | 12.1.1.63 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Raffinose_syn | 0.56 | 46.0 | 3.47e-01 | 100.0% | 82.2% |
| 5057004 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 41.0 | 3.11e-01 | 91.8% | 42.7% |
| 4970229 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.55 | 39.0 | 3.34e-01 | 77.6% | 63.5% |
| 5076162 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.55 | 42.0 | 2.63e-01 | 98.0% | 28.8% |
| 4021338 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.54 | 45.0 | 3.71e-01 | 100.0% | 93.0% |
| 3845679 | 355.1.1.6 ↗ | few secondary structure elements › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › Trefoil/Plexin domain-like › MGC-24 | 0.54 | 36.0 | 3.55e-01 | 71.4% | 63.6% |
| 3579910 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.53 | 38.0 | 3.64e-01 | 77.6% | 100.0% |
| 4318391 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.53 | 45.0 | 2.71e-01 | 100.0% | 32.8% |
| 3264430 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 43.0 | 3.55e-01 | 100.0% | 75.2% |
| 3595016 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.53 | 45.0 | 3.57e-01 | 100.0% | 85.5% |
| 3842649 | 11.1.1.584 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CATSPERE_NTD2 | 0.53 | 45.0 | 3.48e-01 | 100.0% | 64.2% |
| 3934639 | 390.1.1.1 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like › PAN_1 | 0.52 | 41.0 | 3.34e-01 | 85.7% | 87.4% |
| 3896773 | 10.32.1.234 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PGAP1_3rd | 0.52 | 41.0 | 3.17e-01 | 98.0% | 94.3% |
| 4076504 | 7527.1.1.2 ↗ | a/b three-layered sandwiches › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › SurE-like/CoA-transferase family III (CaiB/BaiF) › CoA_transf_3 | 0.52 | 36.0 | 2.19e-01 | 73.5% | 31.7% |
| 3687173 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.52 | 44.0 | 3.17e-01 | 100.0% | 80.6% |
| 4971492 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.52 | 39.0 | 2.41e-01 | 93.9% | 27.6% |
| 4623065 | 1.1.2.14 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Cerato-platanin | 0.52 | 43.0 | 3.31e-01 | 100.0% | 91.2% |
| 4629991 | 2003.1.5.19 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TRM | 0.51 | 42.0 | 2.54e-01 | 91.8% | 26.4% |
| 4120485 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.51 | 39.0 | 2.30e-01 | 81.6% | 17.9% |
| 3625214 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.51 | 39.0 | 3.28e-01 | 89.8% | 88.4% |