←Back to structures

MG592602.1__AUR97227.1__NVP1237B_73__00073

Bact-Vir

MG592602.1__AUR97227.1__NVP1237B_73__00073

Identity

Accession:
MG592602 ↗
Kingdom:
phage

Quality

78.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.237.B._10N.261.52.C5

TaxID: 1881354

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-53
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6fjxA01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.56 38.0 2.36e-01 72.7% 83.0%
1vw4H00 3.90.1180.10 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L13p; Chain: A; › Ribosomal protein L13 0.56 42.0 3.00e-01 86.4% 38.5%
7xhlD02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.53 41.0 2.58e-01 88.6% 89.1%
3gdoA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 39.0 2.68e-01 93.2% 45.7%
1dz1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 38.0 3.44e-01 88.6% 55.7%
4lurA02 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.51 40.0 2.67e-01 100.0% 70.0%
6k8nA01 3.40.50.140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.50 35.0 2.54e-01 79.5% 69.0%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3712405 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 38.0 2.36e-01 70.5% 47.7%
3600598 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 42.0 3.12e-01 88.6% 80.0%
3962766 330.10.1.1 ↗ a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain › YcaO 0.56 39.0 3.01e-01 77.3% 75.7%
3388887 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.53 40.0 3.66e-01 88.6% 60.0%
3402542 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.53 40.0 3.53e-01 90.9% 57.3%
3513438 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 32.0 2.51e-01 86.4% 26.3%
4998031 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.52 42.0 2.97e-01 100.0% 65.9%
3530410 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.52 39.0 3.46e-01 88.6% 54.3%
3820607 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.52 39.0 3.53e-01 88.6% 56.9%
3499881 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.51 42.0 2.58e-01 100.0% 95.8%
4004145 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.51 37.0 2.54e-01 90.9% 19.5%
3585116 5001.1.1.1 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.51 37.0 2.42e-01 81.8% 67.7%
3482807 277.1.1.0 ↗ a+b two layers › PX domain › PX domain › PX domain 0.50 38.0 2.91e-01 84.1% 64.8%
3508085 4.8.1.2 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.50 41.0 3.70e-01 97.7% 66.2%