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MG592602.1__AUR97230.1__NVP1237B_76__00076
Bact-VirMG592602.1__AUR97230.1__NVP1237B_76__00076
Identity
- Accession:
- MG592602 ↗
- Kingdom:
- phage
Quality
72.2
mean pLDDT
Taxonomy
TaxID: 1881354
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-66
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5suvC00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.65 | 52.0 | 4.25e-01 | 89.2% | 56.0% |
| 5xukA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.63 | 49.0 | 4.22e-01 | 89.2% | 56.5% |
| 5xuhA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.62 | 50.0 | 4.12e-01 | 90.8% | 55.2% |
| 5d1pA01 | 3.10.450.740 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 45.0 | 4.54e-01 | 78.5% | 82.1% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.61 | 38.0 | 3.13e-01 | 78.5% | 34.7% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.59 | 42.0 | 3.04e-01 | 84.6% | 25.4% |
| 3pieC05 | 2.170.260.40 | Mainly Beta › Beta Complex › paz domain › | 0.59 | 44.0 | 3.27e-01 | 80.0% | 40.1% |
| 4a2lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.58 | 41.0 | 2.63e-01 | 90.8% | 15.2% |
| 3gvpA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 42.0 | 3.22e-01 | 76.9% | 97.5% |
| 4oagB02 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.56 | 51.0 | 3.65e-01 | 100.0% | 73.7% |
| 2odhA02 | 3.30.70.3570 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain | 0.56 | 45.0 | 3.82e-01 | 89.2% | 62.7% |
| 2avtB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.55 | 46.0 | 3.42e-01 | 93.8% | 48.8% |
| 5kiqA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.54 | 40.0 | 3.90e-01 | 86.2% | 70.8% |
| 2x8fA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.54 | 41.0 | 2.67e-01 | 83.1% | 20.0% |
| 2r6iA01 | 3.30.2180.10 | Alpha Beta › 2-Layer Sandwich › ATP12-like › ATP12-like | 0.54 | 43.0 | 3.89e-01 | 93.8% | 66.7% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.54 | 44.0 | 3.14e-01 | 96.9% | 35.1% |
| 2wyrA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.53 | 42.0 | 2.93e-01 | 89.2% | 73.3% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 34.0 | 2.75e-01 | 81.5% | 33.3% |
| 4gicA02 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.52 | 45.0 | 3.08e-01 | 95.4% | 73.3% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.52 | 45.0 | 3.53e-01 | 100.0% | 69.9% |
| 5cw7B00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.52 | 39.0 | 3.39e-01 | 81.5% | 54.3% |
| 2hlyA00 | 3.10.550.10 | Alpha Beta › Roll › Atu2299-like › Hypothetical protein Atu2299 | 0.51 | 42.0 | 3.12e-01 | 100.0% | 96.1% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 44.0 | 2.70e-01 | 100.0% | 60.4% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3239923 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.80 | 50.0 | 4.35e-01 | 92.3% | 43.2% |
| 4010689 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.74 | 50.0 | 4.24e-01 | 70.8% | 45.0% |
| 3596051 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.67 | 47.0 | 3.99e-01 | 96.9% | 44.8% |
| 4162022 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.67 | 38.0 | 3.52e-01 | 90.8% | 45.0% |
| 3931157 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.66 | 39.0 | 3.97e-01 | 76.9% | 60.0% |
| 4432202 | 301.8.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS | 0.66 | 52.0 | 4.38e-01 | 90.8% | 51.7% |
| 5049994 | 243.6.1.4 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA | 0.65 | 45.0 | 4.31e-01 | 76.9% | 62.7% |
| 3434296 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.65 | 52.0 | 4.38e-01 | 87.7% | 52.7% |
| 2388831 | 301.8.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 4'-phosphopantetheinyl transferase › 4'-phosphopantetheinyl transferase › ACPS | 0.63 | 49.0 | 4.22e-01 | 89.2% | 56.5% |
| 1684841 | 241.13.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › N-terminal domain of secreted effector protein sifA › N-terminal domain of secreted effector protein sifA › SopD | 0.63 | 43.0 | 3.95e-01 | 80.0% | 54.1% |
| 3245468 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.63 | 50.0 | 4.07e-01 | 86.2% | 52.5% |
| 4112791 | 4.8.1.5 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR | 0.62 | 36.0 | 4.07e-01 | 72.3% | 76.0% |
| 3718225 | 241.1.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › CesT | 0.62 | 42.0 | 3.31e-01 | 70.8% | 86.4% |
| 4878220 | 2002.1.1.134 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_2 | 0.62 | 43.0 | 2.75e-01 | 73.8% | 31.9% |
| 4978884 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.62 | 44.0 | 4.21e-01 | 80.0% | 65.3% |
| 4990951 | 3535.1.1.0 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 | 0.61 | 47.0 | 3.79e-01 | 84.6% | 94.1% |
| 4295817 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.61 | 51.0 | 4.01e-01 | 89.2% | 50.0% |
| 3681793 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.61 | 45.0 | 4.69e-01 | 92.3% | 85.0% |
| 4554582 | 3018.1.1.1 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › TilS | 0.61 | 45.0 | 4.08e-01 | 80.0% | 67.8% |
| 3318809 | 244.2.1.0 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain | 0.61 | 40.0 | 3.31e-01 | 73.8% | 36.7% |
| 4946183 | 243.6.1.12 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA | 0.60 | 41.0 | 3.92e-01 | 73.8% | 61.3% |
| 3191760 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.59 | 40.0 | 2.70e-01 | 96.9% | 17.4% |
| 3962428 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.58 | 47.0 | 3.24e-01 | 95.4% | 72.3% |
| 5045830 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.58 | 39.0 | 3.85e-01 | 80.0% | 65.7% |
| 3973145 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.58 | 35.0 | 3.73e-01 | 70.8% | 70.9% |
| 2486950 | 7052.1.1.1 ↗ | a+b two layers › N-terminal domain of PprA › N-terminal domain of PprA › N-terminal domain of PprA › PF29825 | 0.57 | 43.0 | 3.69e-01 | 81.5% | 63.1% |
| 3605475 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.55 | 51.0 | 3.37e-01 | 98.5% | 40.4% |
| 5073740 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.54 | 43.0 | 3.07e-01 | 89.2% | 76.2% |
| 3967247 | 304.48.1.14 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF | 0.53 | 43.0 | 3.14e-01 | 87.7% | 72.2% |
| 3504727 | 101.1.1.76 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 | 0.53 | 44.0 | 3.35e-01 | 96.9% | 70.6% |
| 3699984 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 46.0 | 2.91e-01 | 100.0% | 53.9% |
| 3972260 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.52 | 40.0 | 3.39e-01 | 84.6% | 94.5% |
| 4048956 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.52 | 43.0 | 3.13e-01 | 92.3% | 34.8% |
| 3719210 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.51 | 35.0 | 2.07e-01 | 73.8% | 15.2% |
| 3926416 | 1.1.1.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD | 0.51 | 37.0 | 3.21e-01 | 80.0% | 85.5% |