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MG592605.1__AUR97442.1__NVP1239O_06__00006
Bact-VirMG592605.1__AUR97442.1__NVP1239O_06__00006
Identity
- Accession:
- MG592605 ↗
- Kingdom:
- phage
Quality
74.0
mean pLDDT
Taxonomy
TaxID: 1881233
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 124-177
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5vmzA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.69 | 47.0 | 5.18e-01 | 81.5% | 100.0% |
| 3gxwC00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.65 | 50.0 | 4.21e-01 | 87.0% | 84.0% |
| 1j7xA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.62 | 40.0 | 2.68e-01 | 83.3% | 16.4% |
| 2wdoA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.62 | 38.0 | 2.90e-01 | 72.2% | 26.8% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.60 | 48.0 | 4.61e-01 | 92.6% | 78.5% |
| 4lurA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.59 | 43.0 | 2.82e-01 | 79.6% | 53.3% |
| 3s93A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.58 | 39.0 | 3.51e-01 | 100.0% | 47.5% |
| 17gsA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 46.0 | 3.88e-01 | 94.4% | 60.6% |
| 5xukA00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.56 | 36.0 | 2.93e-01 | 79.6% | 31.3% |
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.55 | 46.0 | 3.58e-01 | 94.4% | 86.4% |
| 4hz4A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 45.0 | 4.01e-01 | 98.1% | 78.6% |
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.54 | 38.0 | 3.22e-01 | 100.0% | 42.7% |
| 2py5A05 | 4.10.80.20 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › DNA polymerase; domain 5 | 0.53 | 31.0 | 3.71e-01 | 87.0% | 90.0% |
| 6p2uA02 | 3.30.30.30 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.52 | 32.0 | 3.33e-01 | 70.4% | 61.5% |
| 2lh9A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.52 | 35.0 | 3.17e-01 | 96.3% | 48.7% |
| 2xubA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 32.0 | 2.94e-01 | 88.9% | 43.6% |
| 2jxwA00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.52 | 33.0 | 3.10e-01 | 75.9% | 46.7% |
| 2h1eA02 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 39.0 | 3.95e-01 | 85.2% | 92.7% |
| 2iq1A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 41.0 | 2.77e-01 | 96.3% | 62.3% |
| 3vkhB09 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 36.0 | 2.61e-01 | 77.8% | 48.6% |
| 1xa3A01 | 3.40.50.10540 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Crotonobetainyl-coa:carnitine coa-transferase; domain 1 | 0.51 | 37.0 | 2.41e-01 | 83.3% | 62.0% |
| 5m1pB00 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.50 | 41.0 | 2.89e-01 | 94.4% | 40.2% |
| 2yztA00 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 41.0 | 3.92e-01 | 100.0% | 78.8% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3583479 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 51.0 | 5.74e-01 | 88.9% | 100.0% |
| 3228875 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.71 | 49.0 | 4.89e-01 | 77.8% | 70.9% |
| 3404953 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.69 | 48.0 | 5.42e-01 | 83.3% | 100.0% |
| 3523516 | 5063.1.1.11 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › TSTD2_N | 0.68 | 59.0 | 5.47e-01 | 100.0% | 77.1% |
| 3781064 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.64 | 46.0 | 4.30e-01 | 90.7% | 60.0% |
| 4889754 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.64 | 48.0 | 4.68e-01 | 90.7% | 73.3% |
| 3215728 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 42.0 | 4.09e-01 | 70.4% | 70.0% |
| 3205634 | 630.1.1.0 ↗ | a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain | 0.62 | 51.0 | 3.64e-01 | 98.1% | 49.2% |
| 3568187 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.62 | 39.0 | 4.55e-01 | 75.9% | 94.3% |
| 3481722 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.61 | 48.0 | 3.91e-01 | 88.9% | 80.0% |
| 3496419 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.60 | 41.0 | 2.28e-01 | 72.2% | 17.8% |
| 3389857 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.59 | 49.0 | 3.80e-01 | 100.0% | 67.1% |
| 3219795 | 5001.1.1.41 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw | 0.59 | 47.0 | 2.93e-01 | 100.0% | 14.8% |
| 4972215 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.59 | 45.0 | 3.04e-01 | 92.6% | 21.9% |
| 363486 | 327.13.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › PrgH | 0.59 | 35.0 | 3.55e-01 | 96.3% | 55.8% |
| 3516336 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 47.0 | 3.78e-01 | 100.0% | 76.2% |
| 4968047 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 40.0 | 3.24e-01 | 70.4% | 36.2% |
| 3959539 | 3708.1.1.0 ↗ | a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains | 0.58 | 42.0 | 4.27e-01 | 87.0% | 81.1% |
| 3557314 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 46.0 | 3.58e-01 | 92.6% | 65.9% |
| 3581503 | 109.4.1.1401 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_RPAP1 | 0.58 | 48.0 | 3.01e-01 | 100.0% | 21.2% |
| 3958549 | 2006.1.2.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases | 0.57 | 38.0 | 2.86e-01 | 100.0% | 23.7% |
| 3517343 | 386.1.1.307 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29712 | 0.57 | 50.0 | 3.67e-01 | 100.0% | 57.3% |
| 3924514 | 109.4.1.83 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Suf | 0.57 | 35.0 | 2.22e-01 | 92.6% | 11.4% |
| 3370517 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.56 | 46.0 | 3.41e-01 | 98.1% | 34.4% |
| 3995638 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.56 | 46.0 | 3.67e-01 | 100.0% | 70.8% |
| 3706889 | 109.4.1.20 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RYDR_ITPR | 0.56 | 37.0 | 2.35e-01 | 100.0% | 11.9% |
| 3419793 | 5.1.10.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 | 0.56 | 43.0 | 3.30e-01 | 87.0% | 61.5% |
| 3400923 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.55 | 37.0 | 3.63e-01 | 75.9% | 63.3% |
| 4279139 | 3819.2.1.1 ↗ | alpha complex topology › CRISPR-associated endonuclease Cas9 alpha-helical lobe › F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobe › F. novicida CRISPR-associated endonuclease Cas9 alpha-helical lobe › Csx12 | 0.55 | 38.0 | 2.12e-01 | 72.2% | 26.2% |
| 3392481 | 109.4.1.1434 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC9-Trs120, PF26251 | 0.54 | 38.0 | 2.23e-01 | 72.2% | 57.2% |
| 5042330 | 4203.1.1.0 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like | 0.54 | 38.0 | 3.53e-01 | 100.0% | 58.6% |
| 3394097 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.54 | 42.0 | 3.56e-01 | 90.7% | 94.0% |
| 4028139 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.54 | 42.0 | 4.22e-01 | 98.1% | 85.5% |
| 3685473 | 109.4.1.295 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COP9_hel_rpt | 0.53 | 36.0 | 2.13e-01 | 72.2% | 28.2% |
| 3503277 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 44.0 | 4.16e-01 | 94.4% | 100.0% |
| 3444901 | 4954.1.1.0 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit | 0.52 | 35.0 | 2.58e-01 | 72.2% | 29.7% |
| 3489205 | 221.1.1.43 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF3337 | 0.51 | 40.0 | 3.27e-01 | 92.6% | 91.3% |
| 5024071 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 39.0 | 3.17e-01 | 88.9% | 44.3% |
| 3743854 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.51 | 40.0 | 2.41e-01 | 96.3% | 62.0% |
| 3414267 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.50 | 42.0 | 2.77e-01 | 100.0% | 43.8% |