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MG592609.1__AUR97733.1__NVP1244A_031__00031
Bact-VirMG592609.1__AUR97733.1__NVP1244A_031__00031
Identity
- Accession:
- MG592609 ↗
- Kingdom:
- phage
Quality
58.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Ackermannviridae›
Vibrio_phage_1.244.A._10N.261.54.C3
TaxID: 1881412
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 158-245
Domain cluster:
rep: MN018232.1__QDH50655.1__X__00189__D210-318
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.93 | 88.0 | 7.91e-01 | 100.0% | 85.1% |
| 2di8A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 44.0 | 4.37e-01 | 100.0% | 61.7% |
| 3mjgX03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.67 | 50.0 | 4.80e-01 | 100.0% | 69.3% |
| 2nqcA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 43.0 | 4.17e-01 | 100.0% | 59.8% |
| 2c9jA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.64 | 50.0 | 3.86e-01 | 86.4% | 49.3% |
| 2pslA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.63 | 51.0 | 3.87e-01 | 88.6% | 49.8% |
| 1uisA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.63 | 52.0 | 3.91e-01 | 90.9% | 48.7% |
| 2wjqA00 | 2.40.160.40 | Mainly Beta › Beta Barrel › Porin › monomeric porin ompg | 0.62 | 49.0 | 3.72e-01 | 84.1% | 100.0% |
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 46.0 | 4.49e-01 | 100.0% | 72.6% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.62 | 54.0 | 4.42e-01 | 97.7% | 86.6% |
| 3n89A02 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.61 | 44.0 | 3.80e-01 | 100.0% | 48.2% |
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.61 | 51.0 | 4.07e-01 | 90.9% | 91.5% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.61 | 49.0 | 3.58e-01 | 86.4% | 93.8% |
| 7altB01 | 2.60.40.3510 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 43.0 | 3.61e-01 | 75.0% | 44.3% |
| 1hcfX00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 44.0 | 4.21e-01 | 100.0% | 68.3% |
| 4dkmA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.58 | 52.0 | 3.94e-01 | 100.0% | 58.7% |
| 4ctaA02 | 3.30.70.2860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 41.0 | 4.38e-01 | 100.0% | 86.7% |
| 2g16B00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.58 | 51.0 | 4.12e-01 | 96.6% | 73.6% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 47.0 | 3.74e-01 | 90.9% | 78.9% |
| 4tw1B00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.57 | 44.0 | 3.18e-01 | 85.2% | 90.1% |
| 3anzC00 | 2.70.240.10 | Mainly Beta › Distorted Sandwich › Leukocidin-like › Leukocidin/porin MspA | 0.57 | 44.0 | 3.16e-01 | 85.2% | 92.2% |
| 1uynX00 | 2.40.128.130 | Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain | 0.57 | 49.0 | 3.50e-01 | 96.6% | 95.3% |
| 1rwhA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 39.0 | 3.59e-01 | 71.6% | 70.2% |
| 3qkgA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.56 | 47.0 | 3.95e-01 | 96.6% | 76.8% |
| 3cjeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 38.0 | 3.25e-01 | 71.6% | 69.3% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 48.0 | 3.81e-01 | 96.6% | 87.4% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 46.0 | 3.64e-01 | 93.2% | 85.9% |
| 1uxbA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.54 | 44.0 | 3.48e-01 | 88.6% | 51.6% |
| 4ktpA01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.54 | 43.0 | 3.26e-01 | 90.9% | 53.6% |
| 2pn5A01 | 2.60.40.2950 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 43.0 | 4.26e-01 | 100.0% | 80.6% |
| 1h4uA00 | 2.40.155.10 | Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein | 0.54 | 47.0 | 3.50e-01 | 100.0% | 50.6% |
| 4aqzA00 | 2.60.40.3470 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 43.0 | 3.72e-01 | 86.4% | 68.8% |
| 3w57A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.54 | 41.0 | 3.91e-01 | 86.4% | 98.2% |
| 3hlkA01 | 2.60.40.2240 | Mainly Beta › Sandwich › Immunoglobulin-like › Acyl-CoA thioester hydrolase/BAAT N-terminal domain | 0.54 | 48.0 | 4.16e-01 | 100.0% | 73.3% |
| 1hn0A04 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.54 | 36.0 | 3.33e-01 | 70.5% | 64.8% |
| 2x1cB01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.53 | 44.0 | 3.17e-01 | 94.3% | 75.9% |
| 3fsdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 36.0 | 3.32e-01 | 70.5% | 95.0% |
| 1htwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 44.0 | 3.74e-01 | 95.5% | 98.7% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 3.80e-01 | 71.6% | 92.1% |
| 1r0mA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 42.0 | 3.67e-01 | 86.4% | 94.6% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 45.0 | 4.06e-01 | 100.0% | 97.6% |
| 2zylA02 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.52 | 44.0 | 3.46e-01 | 100.0% | 71.0% |
| 4ghbA00 | 2.40.160.190 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 42.0 | 3.07e-01 | 89.8% | 98.8% |
| 2p0lA00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 44.0 | 3.17e-01 | 95.5% | 52.3% |
| 1pm4A00 | 2.60.120.510 | Mainly Beta › Sandwich › Jelly Rolls › Mitogen Ypm | 0.52 | 44.0 | 4.08e-01 | 100.0% | 76.1% |
| 4gf4A00 | 2.40.160.180 | Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB | 0.51 | 41.0 | 2.89e-01 | 88.6% | 97.7% |
| 4f8lA00 | 2.60.40.3590 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 45.0 | 3.89e-01 | 100.0% | 65.2% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 441034 | 3386.1.1.4 ↗ | beta sandwiches › gp9 C-terminal domain-like › gp9 C-terminal domain-related › gp9 C-terminal domain-related › T4_gp9_10_C | 0.93 | 88.0 | 7.75e-01 | 100.0% | 80.8% |
| 3251054 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.72 | 65.0 | 5.38e-01 | 100.0% | 67.1% |
| 4052154 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.64 | 54.0 | 4.30e-01 | 90.9% | 92.4% |
| 5043213 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.63 | 55.0 | 4.13e-01 | 93.2% | 91.0% |
| 3934460 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 46.0 | 4.35e-01 | 100.0% | 64.8% |
| 4057793 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.62 | 52.0 | 4.22e-01 | 90.9% | 95.2% |
| 3397445 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 44.0 | 4.14e-01 | 100.0% | 60.0% |
| 3921289 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 44.0 | 3.98e-01 | 100.0% | 54.2% |
| 3575268 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.62 | 44.0 | 4.13e-01 | 100.0% | 60.0% |
| 3877536 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.61 | 44.0 | 3.86e-01 | 100.0% | 50.8% |
| 5035736 | 71.1.1.26 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF3108 | 0.61 | 52.0 | 4.19e-01 | 93.2% | 95.9% |
| 3508566 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.61 | 44.0 | 4.09e-01 | 100.0% | 60.9% |
| 4191031 | 5084.3.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter | 0.60 | 52.0 | 3.68e-01 | 100.0% | 94.5% |
| 3974137 | 5084.5.1.69 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › B-barrel_PelB_C | 0.60 | 51.0 | 3.48e-01 | 93.2% | 99.4% |
| 3487071 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.59 | 42.0 | 3.85e-01 | 75.0% | 55.8% |
| 3918910 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.59 | 42.0 | 3.57e-01 | 100.0% | 44.8% |
| 4408461 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.59 | 50.0 | 3.91e-01 | 92.0% | 88.0% |
| 4957722 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.59 | 49.0 | 4.23e-01 | 90.9% | 98.6% |
| 1157836 | 271.1.1.1 ↗ | beta barrels › GFP-like › GFP-like › GFP-like › GFP | 0.59 | 51.0 | 4.21e-01 | 95.5% | 74.4% |
| 3397236 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.58 | 41.0 | 3.79e-01 | 100.0% | 55.0% |
| 3598259 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.58 | 38.0 | 3.29e-01 | 85.2% | 43.0% |
| 3971437 | 5084.5.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin | 0.58 | 44.0 | 3.40e-01 | 84.1% | 82.1% |
| 5014159 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 49.0 | 4.48e-01 | 100.0% | 99.2% |
| 3451912 | 11.2.1.37 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DUF6598 | 0.57 | 43.0 | 4.01e-01 | 100.0% | 62.6% |
| 4942439 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.57 | 44.0 | 3.80e-01 | 84.1% | 97.9% |
| 3444588 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.57 | 45.0 | 2.98e-01 | 85.2% | 98.1% |
| 5044324 | 4178.1.1.1 ↗ | beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › DUF5110 | 0.57 | 44.0 | 4.05e-01 | 85.2% | 81.7% |
| 4028777 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.56 | 45.0 | 2.76e-01 | 88.6% | 99.8% |
| 2003 | 12.2.1.1 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Hyaluronate lyase-like, C-terminal domain › Hyaluronate lyase-like, C-terminal domain › Lyase_8_C | 0.56 | 39.0 | 3.61e-01 | 71.6% | 70.8% |
| 3288440 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.55 | 46.0 | 4.06e-01 | 100.0% | 97.2% |
| 3504143 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.55 | 39.0 | 3.24e-01 | 75.0% | 49.4% |
| 3269848 | 12.1.1.23 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central | 0.55 | 49.0 | 4.27e-01 | 100.0% | 65.9% |
| 3571382 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.54 | 39.0 | 2.45e-01 | 75.0% | 15.7% |
| 3517477 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.54 | 38.0 | 3.67e-01 | 75.0% | 75.2% |
| 3742761 | 243.1.1.41 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Coa1 | 0.53 | 39.0 | 3.63e-01 | 79.5% | 79.1% |
| 3924083 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.53 | 37.0 | 3.11e-01 | 75.0% | 47.1% |
| 4019025 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.52 | 46.0 | 3.87e-01 | 100.0% | 83.3% |
| 3662305 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 39.0 | 2.63e-01 | 80.7% | 40.6% |
| 3179462 | 3385.1.1.0 ↗ | beta barrels › Allergen Alt a 1 › Allergen Alt a 1 › Allergen Alt a 1 | 0.51 | 45.0 | 3.81e-01 | 100.0% | 88.3% |
| 3485933 | 11.2.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain | 0.51 | 39.0 | 3.55e-01 | 87.5% | 97.8% |
| 3508989 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.51 | 36.0 | 3.12e-01 | 75.0% | 51.0% |
| 3619496 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 37.0 | 2.48e-01 | 78.4% | 98.2% |
| 4514238 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.51 | 34.0 | 3.57e-01 | 95.5% | 76.9% |
D2
medium
residues 10-29_42-77
D3
medium
residues 78-148