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MG592613.1__AUR98189.1__NVP1247B_45__00045

Bact-Vir

MG592613.1__AUR98189.1__NVP1247B_45__00045

Identity

Accession:
MG592613 ↗
Kingdom:
phage

Quality

93.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-56
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1rr7A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 46.0 4.95e-01 80.0% 68.8%
1d1lA00 3.30.240.10 Alpha Beta › 2-Layer Sandwich › CRO Repressor › CRO Repressor 0.76 64.0 6.21e-01 100.0% 83.6%
2is6A04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.75 51.0 3.57e-01 70.9% 26.1%
1dv0A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.71 41.0 4.52e-01 89.1% 71.1%
1wgnA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.71 40.0 3.88e-01 90.9% 47.6%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 53.0 5.77e-01 90.9% 93.5%
2ecbA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 48.0 4.95e-01 81.8% 78.4%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 44.0 4.15e-01 100.0% 53.7%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 47.0 4.26e-01 81.8% 53.3%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 56.0 5.01e-01 92.7% 65.8%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 44.0 4.70e-01 81.8% 78.7%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.68 46.0 5.09e-01 80.0% 95.1%
3wdsA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 48.0 3.03e-01 74.5% 30.0%
8e9gE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.67 47.0 4.54e-01 76.4% 65.1%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 51.0 3.81e-01 81.8% 71.4%
3pxpA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.65 57.0 4.77e-01 98.2% 78.5%
2dn0A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 47.0 4.21e-01 81.8% 56.6%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 51.0 4.83e-01 94.5% 73.5%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 44.0 4.28e-01 81.8% 65.6%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 3.85e-01 90.9% 71.0%
3fyaB00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 49.0 4.50e-01 94.5% 63.6%
4ybaA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 49.0 4.55e-01 96.4% 64.9%
2ebyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 53.0 4.78e-01 98.2% 82.3%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.63 53.0 4.72e-01 98.2% 79.0%
3oc2A01 3.90.1310.10 Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) 0.63 47.0 3.33e-01 96.4% 26.0%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 48.0 4.49e-01 94.5% 66.7%
3lmmC04 1.10.10.2340 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.62 49.0 4.16e-01 94.5% 54.0%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.62 51.0 4.97e-01 96.4% 88.9%
1y7oB00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.62 53.0 3.70e-01 96.4% 30.3%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 44.0 4.50e-01 85.5% 77.8%
3dadA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.61 45.0 2.82e-01 100.0% 13.9%
2auwB02 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 47.0 4.47e-01 94.5% 71.4%
2r1jL00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.61 48.0 4.59e-01 94.5% 75.8%
2ofyA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 54.0 4.94e-01 96.4% 80.0%
2rhcA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 52.0 3.34e-01 94.5% 64.2%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 48.0 4.51e-01 94.5% 79.2%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 42.0 4.00e-01 74.5% 95.5%
3fymA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 49.0 4.39e-01 96.4% 90.2%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.92e-01 80.0% 58.3%
3ucxA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 45.0 2.84e-01 80.0% 26.7%
4f78A01 3.30.200.180 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › 0.59 45.0 3.71e-01 83.6% 83.7%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.59 50.0 4.55e-01 100.0% 69.2%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.59 45.0 4.22e-01 96.4% 65.8%
2w0gA00 1.20.58.610 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Cdc37, Hsp90 binding domain 0.58 43.0 3.29e-01 96.4% 34.1%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 46.0 4.44e-01 94.5% 86.2%
7zviA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.58 46.0 3.74e-01 96.4% 73.0%
1vioA01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.58 44.0 4.42e-01 96.4% 81.0%
1br2A03 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.57 44.0 3.73e-01 85.5% 65.3%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.57 49.0 4.25e-01 98.2% 61.6%
3iwfB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.53e-01 100.0% 48.3%
1b0nA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.56 42.0 3.60e-01 92.7% 47.6%
2uyyA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.55 39.0 3.17e-01 80.0% 81.3%
2wfpA03 1.10.441.10 Mainly Alpha › Orthogonal Bundle › Phosphomannose Isomerase; domain 2 › Phosphomannose Isomerase, domain 2 0.53 39.0 3.21e-01 81.8% 93.8%
3w6zA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.53 38.0 3.12e-01 81.8% 82.6%
1kskA01 3.10.290.10 Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain 0.52 42.0 4.01e-01 94.5% 75.8%
3fblA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 38.0 3.39e-01 78.2% 63.4%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.52 45.0 4.15e-01 100.0% 74.6%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.50 46.0 3.26e-01 100.0% 44.5%
ECOD (56)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4057001 6056.1.1.2 alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N 0.83 72.0 6.28e-01 94.5% 71.2%
4033200 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 58.0 6.34e-01 74.5% 91.1%
4995688 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 58.0 5.80e-01 78.2% 76.4%
5052031 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 54.0 6.18e-01 74.5% 100.0%
4949368 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 58.0 5.80e-01 80.0% 81.8%
5052346 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 57.0 5.56e-01 80.0% 75.0%
3574083 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.75 51.0 5.62e-01 80.0% 86.7%
4406283 6056.1.1.2 alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N 0.74 58.0 5.43e-01 94.5% 68.6%
5000156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 57.0 5.89e-01 83.6% 92.0%
3579029 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.74 50.0 4.41e-01 80.0% 50.0%
3996572 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.73 50.0 5.52e-01 80.0% 86.7%
3484360 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 50.0 4.57e-01 80.0% 55.7%
3454275 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.72 51.0 5.34e-01 81.8% 80.0%
5005224 101.1.6.39 alpha arrays › HTH › HTH › TrpR › Terminase_5 0.72 47.0 3.92e-01 81.8% 41.1%
5072203 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 47.0 4.93e-01 80.0% 74.0%
3927026 101.1.1.195 alpha arrays › HTH › HTH › Three-helical HTH › HTH_5 0.71 46.0 4.01e-01 98.2% 43.5%
3412630 101.1.10.7 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.71 54.0 4.05e-01 81.8% 53.3%
4189523 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 53.0 5.71e-01 80.0% 100.0%
3478184 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 48.0 3.90e-01 81.8% 39.0%
3538312 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.71 49.0 5.18e-01 81.8% 80.0%
3685591 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.71 43.0 4.54e-01 89.1% 68.0%
3495504 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 49.0 5.17e-01 81.8% 80.0%
4135670 314.1.1.3 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d 0.70 53.0 3.17e-01 81.8% 23.7%
3219861 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 49.0 4.91e-01 81.8% 72.7%
3243458 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.70 49.0 4.49e-01 81.8% 57.1%
3889817 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 48.0 4.20e-01 81.8% 50.0%
3582723 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.69 50.0 4.59e-01 81.8% 60.0%
4275568 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.68 50.0 4.55e-01 81.8% 60.0%
4955663 4021.1.1.1 alpha arrays › alpha-helical domain in 2-methylcitrate dehydratase PrpD › alpha-helical domain in 2-methylcitrate dehydratase PrpD › alpha-helical domain in 2-methylcitrate dehydratase PrpD › SDH_alpha 0.68 51.0 3.30e-01 81.8% 58.5%
3244958 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 49.0 4.65e-01 81.8% 64.6%
3246596 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.68 49.0 4.38e-01 81.8% 56.0%
4404513 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.67 49.0 4.37e-01 81.8% 56.0%
5074725 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.67 56.0 5.31e-01 92.7% 83.1%
3333472 101.1.1.1 alpha arrays › HTH › HTH › Three-helical HTH › Homeodomain 0.67 48.0 4.33e-01 81.8% 56.0%
5039660 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.66 59.0 3.66e-01 100.0% 65.1%
3243454 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 51.0 4.95e-01 81.8% 75.0%
3976255 101.1.4.17 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_26 0.65 52.0 4.77e-01 94.5% 66.7%
3245973 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 55.0 3.28e-01 98.2% 13.1%
1510513 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.64 51.0 4.18e-01 94.5% 46.7%
3965598 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.64 51.0 4.80e-01 92.7% 74.3%
3407997 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 47.0 4.11e-01 81.8% 63.5%
4061717 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.62 49.0 4.08e-01 92.7% 54.3%
4983508 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 44.0 4.19e-01 80.0% 80.0%
3829115 101.1.1.270 alpha arrays › HTH › HTH › Three-helical HTH › A_thal_3526 0.61 44.0 4.29e-01 80.0% 67.7%
5013051 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 50.0 3.72e-01 89.1% 66.2%
3293154 101.1.2.472 alpha arrays › HTH › HTH › winged helix domain › A_thal_3526 0.60 44.0 4.32e-01 80.0% 75.0%
5069812 2004.1.1.22 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activat 0.59 49.0 3.35e-01 100.0% 81.1%
5021144 101.1.1.545 alpha arrays › HTH › HTH › Three-helical HTH › DUF1699 0.59 40.0 4.09e-01 76.4% 72.7%
3250282 103.1.1.2 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CUE 0.58 40.0 4.03e-01 87.3% 74.5%
4969622 2004.1.1.245 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_PrkA 0.57 47.0 3.12e-01 100.0% 83.3%
3719034 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.56 42.0 2.74e-01 81.8% 19.6%
3931388 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.56 38.0 3.87e-01 76.4% 70.9%
3604422 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.56 48.0 4.45e-01 98.2% 90.0%
5001590 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.55 40.0 4.00e-01 80.0% 80.0%
3203415 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.54 45.0 4.04e-01 100.0% 96.5%
3632593 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.53 41.0 4.00e-01 94.5% 78.3%