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MG592617.1__AUR98351.1__NVP1250O_13__00013

Bact-Vir

MG592617.1__AUR98351.1__NVP1250O_13__00013

Identity

Accession:
MG592617 ↗
Kingdom:
phage

Quality

86.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.250.O._10N.261.55.E11

TaxID: 1881443

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-78
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tq1A03 1.10.246.190 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Autophagy protein Apg5, helix rich domain 0.52 35.0 3.92e-01 77.6% 91.4%
3u31A02 3.30.1600.10 Alpha Beta › 2-Layer Sandwich › SIR2/SIRT2 'Small Domain' › SIR2/SIRT2 'Small Domain' 0.52 38.0 3.49e-01 77.6% 63.6%
1nzeA00 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.51 35.0 3.15e-01 72.4% 79.5%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3481428 102.1.1.155 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF28662 0.56 45.0 4.10e-01 88.2% 79.0%
3292773 375.1.1.132 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › NOB1_Zn_bind 0.53 34.0 3.94e-01 76.3% 90.9%
4580956 2484.1.1.222 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UPF0236 0.53 41.0 2.86e-01 81.6% 34.5%
3700515 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 38.0 3.23e-01 84.2% 60.0%