←Back to structures
MG592622.1__AUR98881.1__NVP1256O_42__00042
Bact-VirMG592622.1__AUR98881.1__NVP1256O_42__00042
Identity
- Accession:
- MG592622 ↗
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Taxonomy
TaxID: 1881271
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-170
Domain cluster:
rep: OP882271.1__WAX22429.1__X__00084__D6-144
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF21822.4 best | Phage_TAC_15 | 27.7 | 4.70e-06 | 91.9% | 94.4% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1whuA00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.57 | 40.0 | 4.29e-01 | 96.8% | 85.6% |
| 2id6A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 39.0 | 3.68e-01 | 87.1% | 57.1% |
| 3r8eA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.56 | 34.0 | 3.12e-01 | 91.9% | 44.7% |
| 8ew8A01 | 3.50.70.10 | Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › | 0.55 | 45.0 | 3.73e-01 | 89.5% | 88.4% |
| 7vb8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 38.0 | 3.95e-01 | 82.3% | 82.3% |
| 2lvfA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.51 | 34.0 | 3.55e-01 | 99.2% | 72.8% |
| 3hgtA00 | 3.40.50.12360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 45.0 | 3.54e-01 | 100.0% | 99.0% |
| 3o4yA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 39.0 | 4.09e-01 | 86.3% | 90.0% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3947952 | 3103.1.1.3 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_15 | 0.78 | 60.0 | 6.62e-01 | 91.1% | 100.0% |
| 4537543 | 3103.1.1.4 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_9 | 0.71 | 62.0 | 6.26e-01 | 95.2% | 97.6% |
| 3946464 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.69 | 51.0 | 5.72e-01 | 86.3% | 100.0% |
| 3176759 | 109.4.1.929 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_ECM29 | 0.60 | 34.0 | 2.75e-01 | 87.9% | 28.3% |
| 3166133 | 101.1.2.103 ↗ | alpha arrays › HTH › HTH › winged helix domain › SelB-wing_2 | 0.60 | 35.0 | 4.36e-01 | 80.6% | 100.0% |
| 4970900 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.58 | 30.0 | 3.50e-01 | 75.0% | 68.9% |
| 3028734 | 813.1.1.2 ↗ | a+b two layers › Chalcone isomerase › Chalcone isomerase › Chalcone isomerase › Chalcone_2 | 0.55 | 45.0 | 3.69e-01 | 89.5% | 85.8% |
| 5024978 | 4016.1.1.1 ↗ | alpha bundles › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › alpha-helical domain in type II DNA topoisomerase › DNA_topoisoIV | 0.55 | 29.0 | 2.79e-01 | 82.3% | 40.0% |
| 4983350 | 2004.1.1.120 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ResIII | 0.54 | 44.0 | 3.05e-01 | 88.7% | 43.9% |
| 3588085 | 604.39.1.12 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › VTT_dom | 0.52 | 36.0 | 3.22e-01 | 71.0% | 95.7% |
| 4357950 | 5067.1.1.5 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Sterol-sensing | 0.52 | 43.0 | 3.56e-01 | 89.5% | 70.0% |