←Back to structures
MG592624.1__AUR98996.1__NVP1259O_34__00034
Bact-VirMG592624.1__AUR98996.1__NVP1259O_34__00034
Identity
- Accession:
- MG592624 ↗
- Kingdom:
- phage
Quality
88.7
mean pLDDT
Taxonomy
TaxID: 1881446
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 10-69
Domain cluster:
rep: MG592390.1__AUR81342.1__NVP1003O_67__00067__D77-142
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p0jA03 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.61 | 47.0 | 4.11e-01 | 86.7% | 70.5% |
| 1a0iA01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.61 | 49.0 | 4.54e-01 | 95.0% | 78.3% |
| 3tqtA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.59 | 47.0 | 4.59e-01 | 95.0% | 97.1% |
| 4zohB02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.58 | 47.0 | 4.05e-01 | 96.7% | 94.5% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.58 | 39.0 | 3.06e-01 | 100.0% | 30.7% |
| 1whvA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 38.0 | 3.33e-01 | 70.0% | 77.0% |
| 2w3sA04 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.57 | 46.0 | 3.90e-01 | 98.3% | 93.9% |
| 1w1oA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.55 | 44.0 | 3.63e-01 | 95.0% | 85.8% |
| 5zctA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 44.0 | 4.35e-01 | 95.0% | 97.0% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.55 | 42.0 | 3.26e-01 | 88.3% | 65.8% |
| 3jb9H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 40.0 | 3.78e-01 | 81.7% | 97.4% |
| 1a9xA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 45.0 | 4.34e-01 | 95.0% | 95.7% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.55 | 40.0 | 3.27e-01 | 85.0% | 68.8% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.54 | 41.0 | 3.14e-01 | 88.3% | 60.5% |
| 1havB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 40.0 | 3.51e-01 | 86.7% | 77.7% |
| 4egjB03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.53 | 42.0 | 4.21e-01 | 95.0% | 96.9% |
| 1qviA01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.53 | 37.0 | 3.07e-01 | 73.3% | 64.3% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.84e-01 | 81.7% | 92.4% |
| 3hfnA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.92e-01 | 80.0% | 98.3% |
| 3votB02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.53 | 40.0 | 2.66e-01 | 95.0% | 17.7% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 3.84e-01 | 85.0% | 93.9% |
| 3fm2A00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.53 | 39.0 | 3.22e-01 | 86.7% | 77.4% |
| 3kq5A01 | 1.10.3210.40 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › | 0.52 | 41.0 | 2.91e-01 | 91.7% | 66.1% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 38.0 | 3.08e-01 | 83.3% | 54.5% |
| 1d0xA04 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.52 | 36.0 | 2.94e-01 | 78.3% | 75.2% |
| 3tiiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.51 | 39.0 | 3.90e-01 | 91.7% | 98.5% |
| 2i0kA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 42.0 | 3.45e-01 | 100.0% | 95.2% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 39.0 | 3.19e-01 | 88.3% | 55.6% |
| 2ol5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 38.0 | 2.86e-01 | 86.7% | 37.7% |
| 4ydjA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.13e-01 | 88.3% | 90.4% |
| 2vfrA02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 40.0 | 3.30e-01 | 96.7% | 80.8% |
| 2q9kA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 38.0 | 3.05e-01 | 88.3% | 76.2% |
| 2qmlA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.50 | 40.0 | 2.90e-01 | 91.7% | 52.3% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 32.0 | 2.85e-01 | 76.7% | 40.2% |
| 5exvC00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.50 | 40.0 | 3.08e-01 | 96.7% | 77.6% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3593442 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 50.0 | 4.25e-01 | 96.7% | 67.6% |
| 5020252 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 46.0 | 3.82e-01 | 96.7% | 71.7% |
| 4405252 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.57 | 46.0 | 3.67e-01 | 96.7% | 62.1% |
| 3691574 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 41.0 | 3.92e-01 | 80.0% | 96.0% |
| 5028326 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.57 | 48.0 | 3.48e-01 | 100.0% | 84.7% |
| 4680848 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.57 | 46.0 | 3.14e-01 | 98.3% | 53.7% |
| 3565650 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.57 | 38.0 | 3.42e-01 | 70.0% | 81.1% |
| 3843269 | 180.1.1.6 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › FIT | 0.57 | 38.0 | 2.56e-01 | 75.0% | 16.5% |
| 3264411 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 46.0 | 4.25e-01 | 93.3% | 86.3% |
| 3608562 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 47.0 | 3.61e-01 | 100.0% | 54.1% |
| 5059788 | 217.1.1.1 ↗ | a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain › FAD_binding_5 | 0.56 | 45.0 | 3.47e-01 | 96.7% | 66.7% |
| 3255448 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.55 | 38.0 | 3.19e-01 | 75.0% | 61.7% |
| 3942306 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.55 | 45.0 | 3.26e-01 | 100.0% | 80.5% |
| 140040 | 4216.1.1.3 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › LFE_1968-like | 0.55 | 40.0 | 3.27e-01 | 85.0% | 68.8% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.54 | 39.0 | 3.64e-01 | 81.7% | 80.0% |
| 2663669 | 4216.1.1.2 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX | 0.54 | 41.0 | 3.18e-01 | 88.3% | 65.6% |
| 5038351 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.54 | 43.0 | 3.06e-01 | 98.3% | 66.1% |
| 3224294 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.54 | 39.0 | 2.40e-01 | 83.3% | 84.3% |
| 4023744 | 887.1.1.2 ↗ | a+b two layers › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal protein L30p/L7e › Ribosomal_L30,Ribosomal_L30_N | 0.54 | 43.0 | 2.97e-01 | 96.7% | 40.4% |
| 5023886 | 2003.1.5.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_21 | 0.54 | 43.0 | 2.92e-01 | 96.7% | 73.8% |
| 4967947 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.53 | 43.0 | 2.84e-01 | 100.0% | 53.4% |
| 4099546 | 4113.1.1.1 ↗ | beta barrels › VC0467-like › VC0467-like › VC0467-like › DUF179 | 0.52 | 44.0 | 3.26e-01 | 100.0% | 86.2% |
| 5063368 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.52 | 34.0 | 3.42e-01 | 96.7% | 66.7% |
| 4514555 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.52 | 39.0 | 2.82e-01 | 85.0% | 36.9% |
| 3932124 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.52 | 39.0 | 2.66e-01 | 85.0% | 70.8% |
| 5061669 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.51 | 39.0 | 3.57e-01 | 88.3% | 100.0% |
| 4077806 | 1056.1.1.1 ↗ | a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD | 0.51 | 41.0 | 2.97e-01 | 100.0% | 28.3% |
| 4341216 | 180.1.1.0 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase | 0.51 | 38.0 | 2.61e-01 | 86.7% | 76.6% |
| 4867320 | 221.1.1.66 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › PIK3CG_ABD | 0.51 | 39.0 | 3.43e-01 | 91.7% | 91.2% |
| 3761259 | 206.1.3.57 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › FAM91_C | 0.50 | 39.0 | 2.85e-01 | 98.3% | 52.1% |
| 3696190 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 38.0 | 3.18e-01 | 88.3% | 94.2% |