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MG592628.1__AUR99269.1__NVP1263B_33__00033
Bact-VirMG592628.1__AUR99269.1__NVP1263B_33__00033
Identity
- Accession:
- MG592628 ↗
- Kingdom:
- phage
Quality
77.4
mean pLDDT
Taxonomy
TaxID: 1881273
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 199-324
Domain cluster:
rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00157__D2-120
D2
high
residues 342-435
Domain cluster:
rep: OV032902.1__CAH0447963.1__SM033_00139__00139__D168-264
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.70 | 56.0 | 5.75e-01 | 100.0% | 88.0% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.68 | 54.0 | 5.49e-01 | 100.0% | 87.0% |
| 6o38A03 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 50.0 | 5.32e-01 | 95.7% | 90.4% |
| 1a3zA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.59 | 52.0 | 4.48e-01 | 100.0% | 86.7% |
| 3am2A02 | 2.60.120.1050 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 48.0 | 4.47e-01 | 91.5% | 85.5% |
| 2uxtA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.58 | 48.0 | 4.30e-01 | 93.6% | 92.6% |
| 5zwlE01 | 2.60.15.10 | Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal | 0.56 | 32.0 | 3.34e-01 | 90.4% | 58.0% |
| 2xu9A03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.56 | 46.0 | 4.17e-01 | 90.4% | 72.7% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 45.0 | 4.62e-01 | 86.2% | 92.1% |
| 7s7rA01 | 2.60.40.2860 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 40.0 | 3.58e-01 | 76.6% | 96.4% |
| 5dn6I00 | 2.60.15.10 | Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal | 0.55 | 32.0 | 3.46e-01 | 90.4% | 68.0% |
| 2ux6A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.55 | 40.0 | 3.75e-01 | 78.7% | 70.5% |
| 4f7kA03 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.55 | 42.0 | 3.96e-01 | 91.5% | 67.5% |
| 6evgA01 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.54 | 44.0 | 3.99e-01 | 92.6% | 93.2% |
| 4f2eA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.53 | 42.0 | 4.21e-01 | 90.4% | 92.9% |
| 2e5yA01 | 2.60.15.10 | Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal | 0.52 | 31.0 | 3.26e-01 | 97.9% | 62.5% |
| 1q9jB02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.51 | 35.0 | 2.84e-01 | 70.2% | 66.1% |
| 3mtiB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 44.0 | 3.54e-01 | 94.7% | 58.3% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4448399 | 207.11.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Urease accessory protein ureH › Urease accessory protein ureH › UreD | 0.61 | 47.0 | 3.39e-01 | 84.0% | 56.8% |
| 3957240 | 11.1.1.130 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Inhibitor_I42 | 0.60 | 47.0 | 4.38e-01 | 84.0% | 96.7% |
| 4024708 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.57 | 47.0 | 3.19e-01 | 92.6% | 51.7% |
| 3914250 | 10.4.1.16 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CRF-BP_N | 0.56 | 46.0 | 4.27e-01 | 91.5% | 99.2% |
| 3772630 | 4030.1.1.0 ↗ | alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz | 0.55 | 48.0 | 4.01e-01 | 96.8% | 55.8% |
| 3904629 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.54 | 46.0 | 4.44e-01 | 95.7% | 84.5% |
| 3959025 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.54 | 43.0 | 4.03e-01 | 90.4% | 71.2% |
| 3952691 | 3156.1.1.8 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Cu-oxidase_2 | 0.54 | 43.0 | 4.03e-01 | 90.4% | 71.8% |
| 4856579 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.54 | 38.0 | 4.17e-01 | 92.6% | 100.0% |
| 3408780 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 42.0 | 4.24e-01 | 100.0% | 84.2% |
| 4025717 | 3156.3.1.0 ↗ | beta sandwiches › Cupredoxin-like › Surface antigen 1 (SAG1)-related-sequence (SRS) family › Surface antigen 1 (SAG1)-related-sequence (SRS) family | 0.52 | 41.0 | 3.70e-01 | 88.3% | 93.6% |
| None | — | 0.52 | 44.0 | 4.17e-01 | 96.8% | 79.1% | |
| 5038445 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.50 | 36.0 | 3.62e-01 | 91.5% | 73.7% |
D3
medium
residues 26-89
Domain cluster:
rep: MT366760.1__QJT70983.1__GR7B_00185__00185__D97-159