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MG592630.1__AUR99437.1__NVP1265O_58__00058

Bact-Vir

MG592630.1__AUR99437.1__NVP1265O_58__00058

Identity

Accession:
MG592630 ↗
Kingdom:
phage

Quality

91.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Vibrio_phage_1.265.O._10N.286.52.F6

TaxID: 1881274

Cluster

View cluster (29 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 19-140
PDB
Domain cluster: rep: NC_020842.1__YP_007673413.1__CGPG_00031__00031__D20-185
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1bxwA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.78 74.0 6.46e-01 100.0% 94.2%
2ervA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.77 72.0 6.64e-01 100.0% 99.3%
6x1kA01 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.76 67.0 6.96e-01 100.0% 98.3%
3gp6A00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.75 71.0 6.45e-01 100.0% 83.2%
1p4tA00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.75 70.0 6.39e-01 100.0% 96.1%
2ovsA00 2.40.128.380 Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR 0.69 54.0 5.49e-01 100.0% 84.7%
3g7gH00 2.40.160.20 Mainly Beta › Beta Barrel › Porin › 0.68 58.0 5.40e-01 91.0% 90.1%
4fuvA00 2.40.160.170 Mainly Beta › Beta Barrel › Porin › 0.67 61.0 5.06e-01 100.0% 97.2%
1ewfA02 3.15.20.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 2 › Bactericidal permeability-increasing protein; domain 2 0.67 52.0 4.02e-01 83.6% 59.8%
2qomB00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.65 58.0 4.50e-01 97.5% 98.1%
1aqbA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.65 59.0 5.18e-01 99.2% 68.0%
1i78B00 2.40.128.90 Mainly Beta › Beta Barrel › Lipocalin › OMPT-like 0.65 59.0 4.47e-01 100.0% 99.0%
4bj8K00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.62 54.0 5.50e-01 99.2% 95.0%
3dwoX00 2.40.160.60 Mainly Beta › Beta Barrel › Porin › Outer membrane protein transport protein (OMPP1/FadL/TodX) 0.61 55.0 3.76e-01 100.0% 97.1%
3fidA00 2.40.128.140 Mainly Beta › Beta Barrel › Lipocalin › Outer membrane protein 0.60 54.0 4.10e-01 100.0% 99.3%
2o4vA00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.60 54.0 3.75e-01 99.2% 91.7%
1uynX00 2.40.128.130 Mainly Beta › Beta Barrel › Lipocalin › Autotransporter beta-domain 0.59 55.0 4.14e-01 100.0% 84.6%
4c00A04 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.59 47.0 3.52e-01 86.1% 42.0%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 54.0 5.12e-01 100.0% 94.3%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 52.0 4.91e-01 100.0% 90.6%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 52.0 5.25e-01 99.2% 98.4%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 51.0 5.01e-01 99.2% 97.0%
6wilA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.57 52.0 3.71e-01 99.2% 95.2%
7snsB01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 51.0 4.61e-01 97.5% 97.5%
1tlyA00 2.40.230.20 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Nucleoside-specific channel-forming protein, Tsx-like 0.56 50.0 3.98e-01 97.5% 76.5%
4e1sA00 2.40.160.160 Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain 0.56 51.0 4.09e-01 100.0% 93.0%
3nv0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 49.0 4.14e-01 92.6% 84.2%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 51.0 5.00e-01 100.0% 97.0%
6ihjC00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 49.0 4.34e-01 92.6% 81.5%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 50.0 5.01e-01 99.2% 98.4%
1nqfA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.56 39.0 2.66e-01 70.5% 31.2%
6wimA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.56 43.0 3.08e-01 81.1% 61.5%
1jkgB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 48.0 4.21e-01 92.6% 78.9%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 50.0 4.83e-01 99.2% 97.8%
1g6q102 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.55 42.0 3.71e-01 81.1% 98.9%
4gf4A00 2.40.160.180 Mainly Beta › Beta Barrel › Porin › Carbohydrate-selective porin OprB 0.54 49.0 3.68e-01 99.2% 90.3%
3r0qA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.54 41.0 3.48e-01 81.1% 98.6%
1idpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 47.0 4.39e-01 92.6% 89.1%
1mdcA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 48.0 4.69e-01 98.4% 98.5%
6c1zA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 48.0 4.64e-01 99.2% 93.5%
3f7xA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 46.0 4.53e-01 92.6% 87.2%
5nz7A01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.54 40.0 2.95e-01 78.7% 79.3%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 46.0 4.15e-01 92.6% 72.6%
1q40D00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 45.0 4.02e-01 92.6% 88.6%
3ebyA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 47.0 4.31e-01 95.1% 92.2%
3wirA01 2.70.98.40 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain 0.52 40.0 3.18e-01 80.3% 87.8%
2fxtA00 3.10.450.240 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 44.0 3.83e-01 92.6% 70.8%
1fepA02 2.40.170.20 Mainly Beta › Beta Barrel › Maltoporin; Chain A › TonB-dependent receptor, beta-barrel domain 0.51 36.0 2.32e-01 71.3% 27.5%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 46.0 4.16e-01 99.2% 73.8%
3njtA01 2.40.160.50 Mainly Beta › Beta Barrel › Porin › membrane protein fhac: a member of the omp85/tpsb transporter family 0.51 46.0 3.41e-01 98.4% 93.4%
3ub1A01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 43.0 4.19e-01 91.8% 84.6%
5dl7A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.50 43.0 2.98e-01 91.8% 38.3%
1bt9A00 2.40.160.10 Mainly Beta › Beta Barrel › Porin › Porin 0.50 43.0 3.19e-01 95.9% 47.6%
ECOD (54)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3967771 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.88 84.0 8.22e-01 99.2% 96.2%
2716251 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.82 71.0 7.24e-01 100.0% 92.5%
4063158 5084.1.1.7 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › PagP 0.81 76.0 6.77e-01 100.0% 83.6%
3385673 5084.1.1.10 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OMP_b-brl 0.77 72.0 6.51e-01 100.0% 91.3%
4197411 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.77 73.0 6.03e-01 100.0% 92.5%
3838321 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.77 72.0 5.81e-01 99.2% 94.5%
4537321 5084.1.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Opacity 0.77 73.0 6.26e-01 100.0% 89.4%
4417262 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.76 72.0 6.40e-01 100.0% 97.6%
2715752 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.76 67.0 6.74e-01 100.0% 91.1%
3839251 5084.1.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › HP_OMP 0.76 72.0 6.14e-01 100.0% 91.9%
4279299 5084.1.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.71 65.0 5.70e-01 100.0% 95.6%
169832 5084.1.1.2 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › OmpA_membrane 0.70 65.0 5.39e-01 100.0% 83.1%
3976237 5084.6.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx 0.67 61.0 5.00e-01 100.0% 99.1%
3434245 9.3.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › DUF2921_N 0.66 60.0 5.40e-01 100.0% 94.1%
4114942 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.66 57.0 5.08e-01 100.0% 66.3%
3974058 5084.5.1.28 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › CopB 0.65 61.0 5.01e-01 100.0% 95.7%
3597545 9.2.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.64 58.0 5.62e-01 100.0% 88.1%
4038477 5084.3.1.3 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › PF29188 0.62 54.0 3.97e-01 93.4% 90.8%
3980865 5084.1.1.11 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.62 56.0 4.32e-01 99.2% 97.4%
4619594 5084.6.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Tsx-like channel › Tsx-like channel › Channel_Tsx 0.62 56.0 4.45e-01 100.0% 93.9%
3971437 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.61 56.0 4.57e-01 100.0% 97.7%
3334482 9.23.1.4 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › PAP_fibrillin 0.61 53.0 4.76e-01 98.4% 89.7%
3829251 9.1.1.34 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › PAP_fibrillin 0.60 53.0 4.72e-01 97.5% 88.0%
4946540 12.3.1.13 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_38C 0.60 46.0 3.63e-01 82.0% 84.6%
885 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.59 55.0 4.14e-01 100.0% 84.6%
3969681 5084.1.1.11 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Phenol_MetA_deg 0.59 52.0 4.02e-01 100.0% 87.1%
3482138 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 40.0 2.52e-01 71.3% 29.6%
3451281 71.1.1.12 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › DUF620 0.58 53.0 3.95e-01 100.0% 86.3%
3250241 331.3.1.6 ↗ a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PRELI 0.58 49.0 4.20e-01 89.3% 66.5%
3934301 243.1.1.40 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.57 49.0 4.03e-01 92.6% 78.6%
4009827 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.57 48.0 3.36e-01 91.8% 93.5%
3924286 243.1.1.40 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.56 49.0 4.05e-01 92.6% 81.0%
3879968 883.1.1.2 ↗ a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C 0.56 51.0 4.13e-01 100.0% 80.4%
3229111 243.1.1.40 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.56 48.0 4.04e-01 92.6% 80.5%
4614038 9.1.1.1 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.56 51.0 4.97e-01 100.0% 97.0%
3964572 5084.3.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Autotransporter › Autotransporter › Autotransporter 0.56 49.0 3.81e-01 100.0% 84.3%
3587488 243.1.1.5 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Tim44 0.56 48.0 4.42e-01 91.8% 78.6%
3724449 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.55 38.0 4.24e-01 77.0% 94.4%
2320506 9.1.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 50.0 4.72e-01 100.0% 94.4%
4479712 243.1.1.3 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Scytalone_dh 0.55 47.0 4.12e-01 92.6% 72.8%
4006163 5084.5.4.13 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Outer membrane protein transport protein › DUF481, Porin_OmpG 0.54 47.0 3.60e-01 96.7% 97.6%
4458963 5084.5.1.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_1 0.54 49.0 3.51e-01 99.2% 98.3%
5037955 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 41.0 3.01e-01 80.3% 40.0%
4367626 12.3.1.8 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_65N 0.54 40.0 3.21e-01 80.3% 86.4%
5083090 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 40.0 3.00e-01 79.5% 45.0%
2099578 12.3.1.12 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_transf_36 0.53 40.0 2.81e-01 79.5% 62.1%
3282528 3844.2.1.1 ↗ a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.53 41.0 3.34e-01 100.0% 44.4%
3966665 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.53 47.0 3.27e-01 99.2% 98.6%
4286606 222.1.1.17 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PKS_DH_N 0.53 37.0 3.53e-01 73.0% 90.7%
3969139 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.53 46.0 3.18e-01 97.5% 98.2%
4174868 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.52 42.0 2.63e-01 87.7% 88.9%
1716664 5084.5.3.1 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel 0.52 39.0 2.71e-01 77.9% 27.1%
1806543 5084.5.1.15 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › PgaA_barrel 0.52 47.0 3.57e-01 100.0% 97.9%
1734925 5084.5.1.4 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin › OprD 0.50 43.0 2.98e-01 91.8% 38.3%