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MG592631.1__AUR99494.1__NVP1266O_45__00045

Bact-Vir

MG592631.1__AUR99494.1__NVP1266O_45__00045

Identity

Accession:
MG592631 ↗
Kingdom:
phage

Quality

91.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-93
PDB
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7k98E03 3.30.56.10 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › 0.70 34.0 3.90e-01 80.2% 61.8%
2cazD00 6.10.140.820 Special › Helix non-globular › Helix Hairpins › 0.68 43.0 5.11e-01 84.6% 98.3%
2qv6B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.67 44.0 4.01e-01 82.4% 50.8%
3lmmB05 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 42.0 4.85e-01 100.0% 96.7%
2va8A03 1.10.3380.30 Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › 0.65 56.0 4.19e-01 94.5% 64.0%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 46.0 4.82e-01 100.0% 82.1%
3sqnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 42.0 4.75e-01 98.9% 96.7%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 41.0 4.16e-01 100.0% 63.4%
3ly1D01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.64 43.0 3.79e-01 94.5% 48.1%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 40.0 4.63e-01 100.0% 93.4%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 37.0 4.03e-01 80.2% 69.3%
4i98C01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 44.0 4.69e-01 97.8% 86.7%
1qbjC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 4.76e-01 100.0% 95.5%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 43.0 4.43e-01 100.0% 74.7%
1t6sA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 45.0 4.68e-01 100.0% 81.4%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 40.0 3.87e-01 100.0% 56.7%
2v9vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 40.0 4.59e-01 98.9% 100.0%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 41.0 4.59e-01 100.0% 94.0%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 42.0 4.67e-01 100.0% 97.0%
1xmkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 40.0 4.27e-01 100.0% 77.2%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 42.0 4.24e-01 100.0% 72.2%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.61 48.0 4.86e-01 100.0% 88.6%
1bqnA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.60 37.0 3.72e-01 92.3% 60.6%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 40.0 4.13e-01 100.0% 74.7%
8k1fC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 42.0 3.27e-01 97.8% 34.2%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.58 43.0 4.44e-01 83.5% 81.6%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 4.24e-01 100.0% 85.7%
5tl8A00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.57 43.0 2.71e-01 78.0% 34.4%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 38.0 4.27e-01 97.8% 96.9%
3l09A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 40.0 4.18e-01 100.0% 81.0%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 36.0 3.78e-01 100.0% 74.4%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 36.0 4.08e-01 100.0% 96.9%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 38.0 4.17e-01 100.0% 95.7%
1in0A01 3.30.70.860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 31.0 3.50e-01 92.3% 72.9%
2vpkA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.54 30.0 2.84e-01 94.5% 42.6%
5dx9A01 3.30.70.1020 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trehalose-6-phosphate phosphatase related protein; domain 2 0.54 38.0 4.22e-01 73.6% 97.2%
5vt9B01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 34.0 3.74e-01 100.0% 79.5%
3ldgA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.52 32.0 2.60e-01 100.0% 28.9%
5optn00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.65e-01 100.0% 73.1%
6u9hF02 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.51 29.0 3.18e-01 90.1% 66.2%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.51 39.0 3.90e-01 81.3% 97.9%
5xyiK00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 36.0 3.62e-01 100.0% 74.4%
4mbsA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.50 42.0 2.88e-01 93.4% 65.3%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4994918 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.74 38.0 4.18e-01 83.5% 60.0%
3967651 101.1.2.378 alpha arrays › HTH › HTH › winged helix domain › MksE 0.74 47.0 5.67e-01 98.9% 98.3%
3920426 320.4.1.5 a+b two layers › R3H domain-like › PUB domain › PUB domain › Gasdermin_C 0.72 49.0 3.72e-01 100.0% 31.2%
3728686 101.1.2.123 alpha arrays › HTH › HTH › winged helix domain › Paf67 0.72 46.0 5.15e-01 100.0% 85.7%
3537874 320.4.1.5 a+b two layers › R3H domain-like › PUB domain › PUB domain › Gasdermin_C 0.71 48.0 3.62e-01 100.0% 29.3%
4614032 101.1.2.92 alpha arrays › HTH › HTH › winged helix domain › HTH_11 0.71 47.0 4.97e-01 100.0% 77.5%
3988426 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.71 47.0 5.07e-01 100.0% 82.7%
5061998 101.1.2.63 alpha arrays › HTH › HTH › winged helix domain › FaeA 0.69 47.0 4.88e-01 100.0% 75.3%
3586847 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.69 46.0 4.90e-01 98.9% 78.8%
4995894 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 43.0 4.49e-01 96.7% 68.2%
3511790 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.68 45.0 4.76e-01 98.9% 76.2%
3742471 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 45.0 5.03e-01 100.0% 88.6%
3590297 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 48.0 4.69e-01 100.0% 67.0%
3216952 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 53.0 5.51e-01 100.0% 88.2%
4975590 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 43.0 4.70e-01 100.0% 78.7%
4954889 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.68 42.0 4.79e-01 93.4% 87.7%
5043392 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.67 40.0 4.74e-01 92.3% 84.6%
3989153 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 43.0 4.67e-01 100.0% 82.7%
3343138 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 44.0 4.76e-01 100.0% 84.0%
5028855 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 47.0 4.80e-01 100.0% 81.2%
3588428 101.1.2.66 alpha arrays › HTH › HTH › winged helix domain › Mga 0.64 42.0 4.62e-01 97.8% 85.7%
4971048 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.64 44.0 4.52e-01 98.9% 75.3%
3687829 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 4.42e-01 100.0% 71.1%
3729903 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 46.0 5.04e-01 100.0% 97.1%
4941080 604.39.1.0 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.64 50.0 3.69e-01 85.7% 56.0%
3607265 101.1.2.377 alpha arrays › HTH › HTH › winged helix domain › MCM5_C 0.64 44.0 4.64e-01 100.0% 81.2%
3800982 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 44.0 4.91e-01 100.0% 95.6%
5027879 304.120.1.6 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › ThiI_fer 0.63 40.0 4.34e-01 76.9% 77.3%
5057781 101.1.2.55 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.63 41.0 4.36e-01 95.6% 76.2%
4937240 140.1.1.7 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.63 35.0 2.80e-01 90.1% 28.0%
3550974 101.1.2.377 alpha arrays › HTH › HTH › winged helix domain › MCM5_C 0.63 44.0 4.56e-01 100.0% 78.6%
3455192 320.1.1.11 a+b two layers › R3H domain-like › R3H domain › R3H domain › PF27261 0.62 42.0 4.56e-01 100.0% 84.0%
3656604 148.1.3.41 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › MCM5_C 0.62 41.0 4.38e-01 100.0% 81.3%
5081693 304.160.1.1 a+b two layers › Alpha-beta plaits › Gas vesicle protein GvpF › Gas vesicle protein GvpF › GvpL_GvpF 0.61 48.0 4.16e-01 83.5% 67.6%
4996616 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 37.0 4.34e-01 87.9% 93.2%
4978788 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 37.0 4.36e-01 98.9% 93.3%
3796688 140.1.1.0 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.60 44.0 3.28e-01 76.9% 30.2%
3930630 5001.1.1.5 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_3 0.60 48.0 3.49e-01 87.9% 79.6%
3407482 102.1.1.114 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF26701 0.59 36.0 4.19e-01 86.8% 86.2%
4946812 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.59 35.0 4.00e-01 94.5% 86.7%
3624413 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.58 40.0 4.50e-01 100.0% 98.5%
4576714 140.1.1.7 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.58 40.0 3.42e-01 79.1% 44.1%
5065044 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.58 40.0 4.22e-01 76.9% 80.0%
4318643 140.1.1.4 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 0.58 46.0 3.39e-01 89.0% 31.6%
4069818 140.1.1.7 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.57 46.0 3.47e-01 89.0% 34.3%
4465068 140.1.1.14 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e 0.57 39.0 2.96e-01 78.0% 29.3%
3216209 3532.1.1.0 alpha arrays › RNA-binding domain of telomerase › RNA-binding domain of telomerase › RNA-binding domain of telomerase 0.57 45.0 3.59e-01 86.8% 83.1%
5007853 101.1.2.192 alpha arrays › HTH › HTH › winged helix domain › B_lactamase-like_C 0.57 40.0 4.39e-01 92.3% 95.7%
5031244 140.1.1.7 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.57 39.0 3.07e-01 79.1% 31.4%
None 0.57 38.0 3.07e-01 79.1% 33.9%
4928325 140.1.1.7 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.56 38.0 2.98e-01 78.0% 31.0%
3239645 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.55 41.0 4.38e-01 100.0% 94.7%
4826122 304.48.1.1 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.55 43.0 3.80e-01 82.4% 69.0%
4999836 140.1.1.7 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_2 0.54 39.0 3.34e-01 74.7% 88.3%
4864568 101.1.2.392 alpha arrays › HTH › HTH › winged helix domain › SNRNP200_wHTH 0.54 46.0 4.41e-01 100.0% 82.1%
4241985 2006.1.1.37 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › S6PP+Hydrolase_3 0.53 41.0 3.07e-01 86.8% 84.4%
4295057 2006.1.1.11 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 0.53 41.0 3.07e-01 86.8% 70.7%
3638172 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.53 44.0 3.48e-01 90.1% 51.9%
None 0.53 45.0 4.18e-01 100.0% 73.3%
3782093 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.52 40.0 4.14e-01 94.5% 88.2%
4260479 140.1.1.0 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.52 41.0 3.15e-01 85.7% 66.0%
4512588 140.1.1.0 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 0.51 37.0 3.18e-01 80.2% 46.0%
3554511 101.1.2.206 alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH 0.51 36.0 3.77e-01 100.0% 82.5%
5034952 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.51 38.0 2.90e-01 83.5% 78.5%
4180623 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.50 39.0 4.19e-01 87.9% 96.2%
4031288 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.50 38.0 3.93e-01 100.0% 93.8%
D2 medium residues 96-124
PDB
Domain cluster: representative